AT3G14310 : pectin methylesterase 3
Query Information
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AGICode AT3G14310
Description pectin methylesterase 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G14310 pectin methylesterase 3 pectin methylesterase 3, pectin
methylesterase 3		 1 0.31 -0.32
2 AT4G17890 ARF-GAP domain 8 ARF-GAP domain 8 0.8 0.31 -0.33
3 AT5G59410 Rab5-interacting family protein 0.77 0.32 -0.31
4 AT4G17070 peptidyl-prolyl cis-trans isomerases 0.76 0.31 -0.31
5 AT2G35610 xyloglucanase 113 xyloglucanase 113 0.76 0.32 -0.3
6 AT1G74780 Nodulin-like / Major Facilitator Superfamily protein 0.75 0.3 -0.32
7 AT2G35900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 32 Blast hits to 32 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.75 0.3 -0.32
8 AT4G18800 RAB GTPase homolog A1D ATHSGBP, ATRAB11B, RAB GTPase
homolog A1D, RAB GTPase homolog
A1D		 0.74 0.29 -0.3
9 AT4G12390 pectin methylesterase inhibitor 1 pectin methylesterase inhibitor 1 0.73 0.29 -0.29
10 AT4G00710 BR-signaling kinase 3 BR-signaling kinase 3 0.73 0.3 -0.3
11 AT1G62180 5'adenylylphosphosulfate reductase 2 5'adenylylphosphosulfate reductase
2, ADENOSINE-5'-PHOSPHOSULFATE
REDUCTASE, ATAPR2, PRH,
3'-PHOSPHOADENOSINE-5'-PHOSPHOSULF
ATE (PAPS) REDUCTASE HOMOLOG 43		 0.73 0.33 -0.31
12 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.73 0.28 -0.33
13 AT5G45480 Protein of unknown function (DUF594) 0.72 0.32 -0.33
14 AT1G76990 ACT domain repeat 3 ACT domain repeat 3 0.72 0.32 -0.31
15 AT1G78270 UDP-glucosyl transferase 85A4 UDP-glucosyl transferase 85A4,
UDP-glucosyl transferase 85A4		 0.72 0.33 -0.33
16 AT5G20050 Protein kinase superfamily protein 0.72 0.33 -0.31
17 AT3G18060 transducin family protein / WD-40 repeat family protein 0.72 0.32 -0.31
18 AT1G51790 Leucine-rich repeat protein kinase family protein 0.72 0.29 -0.31
19 AT5G07830 glucuronidase 2 glucuronidase 2, glucuronidase 2 0.71 0.32 -0.32
20 AT1G70230 TRICHOME BIREFRINGENCE-LIKE 27 ALTERED XYLOGLUCAN 4, TRICHOME
BIREFRINGENCE-LIKE 27		 0.71 0.31 -0.32
21 AT5G47020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.71 0.32 -0.31
22 AT1G55110 indeterminate(ID)-domain 7 indeterminate(ID)-domain 7,
indeterminate(ID)-domain 7		 -0.71 0.32 -0.33
23 AT4G11290 Peroxidase superfamily protein 0.71 0.31 -0.33
24 AT3G52500 Eukaryotic aspartyl protease family protein 0.71 0.32 -0.34
25 AT1G78460 SOUL heme-binding family protein 0.7 0.32 -0.31
26 AT1G06160 octadecanoid-responsive Arabidopsis AP2/ERF 59 octadecanoid-responsive
Arabidopsis AP2/ERF 59		 0.7 0.29 -0.31
27 AT3G14840 Leucine-rich repeat transmembrane protein kinase 0.7 0.32 -0.31
28 AT5G59160 type one serine/threonine protein phosphatase 2 PROTOPORPHYRINOGEN OXIDASE, type
one serine/threonine protein
phosphatase 2		 0.7 0.32 -0.29
29 AT5G61160 anthocyanin 5-aromatic acyltransferase 1 anthocyanin 5-aromatic
acyltransferase 1		 0.7 0.32 -0.29
30 AT5G04310 Pectin lyase-like superfamily protein 0.69 0.31 -0.33
31 AT5G37500 gated outwardly-rectifying K+ channel gated outwardly-rectifying K+
channel		 -0.69 0.31 -0.33
32 AT3G05880 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2A -0.69 0.32 -0.33
33 AT5G64080 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP1, xylogen protein 1 -0.69 0.33 -0.29
34 AT1G22310 methyl-CPG-binding domain 8 ATMBD8, methyl-CPG-binding domain
8		 -0.69 0.34 -0.34
35 AT1G71890 Major facilitator superfamily protein SUCROSE-PROTON SYMPORTER 5, SUC5 0.68 0.3 -0.28
36 AT4G18430 RAB GTPase homolog A1E RAB GTPase homolog A1E, RAB GTPase
homolog A1E		 0.68 0.31 -0.32
37 AT2G42610 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 10 0.68 0.29 -0.33
38 AT3G01310 Phosphoglycerate mutase-like family protein -0.68 0.33 -0.32
39 AT1G79400 cation/H+ exchanger 2 cation/H+ exchanger 2, cation/H+
exchanger 2		 0.68 0.31 -0.32
40 AT1G74090 desulfo-glucosinolate sulfotransferase 18 DESULFO-GLUCOSINOLATE
SULFOTRANSFERASE 18, ARABIDOPSIS
SULFOTRANSFERASE 5B,
desulfo-glucosinolate
sulfotransferase 18		 0.67 0.32 -0.31
41 AT4G20780 calmodulin like 42 calmodulin like 42 0.67 0.3 -0.33
42 AT1G13460 Protein phosphatase 2A regulatory B subunit family protein 0.67 0.3 -0.32
43 AT4G13550 triglyceride lipases;triglyceride lipases -0.67 0.33 -0.32
44 AT3G48570 secE/sec61-gamma protein transport protein 0.67 0.33 -0.31
45 AT5G16630 DNA repair protein Rad4 family ATRAD4, RAD4 -0.67 0.31 -0.3
46 AT4G27730 oligopeptide transporter 1 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 6, oligopeptide
transporter 1		 0.66 0.33 -0.34
47 AT3G08560 vacuolar H+-ATPase subunit E isoform 2 vacuolar H+-ATPase subunit E
isoform 2		 0.66 0.29 -0.34
48 AT3G10020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress, anaerobic
respiration; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; Has 47 Blast hits to 47 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.31 -0.31
49 AT5G13580 ABC-2 type transporter family protein ATP-binding cassette G6 -0.66 0.3 -0.31
50 AT1G07745 homolog of RAD51 D ATRAD51D, homolog of RAD51 D,
SUPPRESOR OF SNI1		 -0.66 0.31 -0.32
51 AT1G19710 UDP-Glycosyltransferase superfamily protein 0.66 0.3 -0.32
52 AT3G16530 Legume lectin family protein 0.66 0.33 -0.3
53 AT2G26240 Transmembrane proteins 14C 0.66 0.31 -0.3
54 AT3G50970 dehydrin family protein LOW TEMPERATURE-INDUCED 30, XERO2 -0.66 0.33 -0.32
55 AT1G14730 Cytochrome b561/ferric reductase transmembrane protein
family		 -0.66 0.32 -0.32
56 AT1G15940 Tudor/PWWP/MBT superfamily protein -0.66 0.31 -0.31
57 AT5G23080 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 TOUGH -0.66 0.31 -0.31
58 AT3G50740 UDP-glucosyl transferase 72E1 UDP-glucosyl transferase 72E1 0.66 0.31 -0.31
59 AT4G25110 metacaspase 2 metacaspase 2, metacaspase 1c,
metacaspase 2, metacaspase 1c		 0.66 0.33 -0.31
60 AT4G07820 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.65 0.32 -0.31
61 AT3G04980 DNAJ heat shock N-terminal domain-containing protein 0.65 0.33 -0.32
62 AT4G01120 G-box binding factor 2 BASIC REGION/LEUCINE ZIPPER MOTIF
5, G-box binding factor 2		 -0.65 0.31 -0.29
63 AT3G27230 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.65 0.33 -0.32
64 AT5G08160 serine/threonine protein kinase 3 serine/threonine protein kinase 3,
serine/threonine protein kinase 3		 0.65 0.29 -0.34
65 AT1G07960 PDI-like 5-1 PDI-like 5-1, PDI-like 5-1 0.65 0.3 -0.33
66 AT1G11200 Protein of unknown function (DUF300) 0.65 0.31 -0.32
67 AT3G54670 Structural maintenance of chromosomes (SMC) family protein ATSMC1, STRUCTURAL MAINTENANCE OF
CHROMOSOMES 1, TITAN8		 -0.64 0.33 -0.3
68 AT2G40930 ubiquitin-specific protease 5 ATUBP5, PIGMENT DEFECTIVE EMBRYO
323, ubiquitin-specific protease 5		 -0.64 0.32 -0.32
69 AT1G19850 Transcriptional factor B3 family protein / auxin-responsive
factor AUX/IAA-related		 AUXIN RESPONSE FACTOR 5,
indole-3-acetic acid inducible 24,
MONOPTEROS		 -0.64 0.32 -0.33
70 AT3G23640 heteroglycan glucosidase 1 heteroglycan glucosidase 1 -0.64 0.31 -0.31
71 AT5G53880 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.64 0.31 -0.3
72 AT1G20770 unknown protein; Has 59 Blast hits to 59 proteins in 24
species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 4;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.31 -0.32
73 AT1G15340 methyl-CPG-binding domain 10 methyl-CPG-binding domain 10 -0.64 0.3 -0.32
74 AT5G43810 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 10, PINHEAD, ZWILLE -0.64 0.31 -0.32
75 AT4G24830 arginosuccinate synthase family 0.64 0.29 -0.33
76 AT1G56350 Peptide chain release factor 2 0.64 0.33 -0.31
77 AT4G39350 cellulose synthase A2 ATCESA2, ATH-A, cellulose synthase
A2		 0.64 0.31 -0.31
78 AT5G04240 Zinc finger (C2H2 type) family protein / transcription
factor jumonji (jmj) family protein		 EARLY FLOWERING 6 -0.64 0.31 -0.31
79 AT4G27260 Auxin-responsive GH3 family protein GH3.5, WES1 -0.64 0.32 -0.3
80 AT4G36650 plant-specific TFIIB-related protein plant-specific TFIIB-related
protein, plant-specific
TFIIB-related protein		 -0.64 0.31 -0.31
81 AT1G61350 ARM repeat superfamily protein 0.63 0.31 -0.33
82 AT4G14270 Protein containing PAM2 motif which mediates interaction
with the PABC domain of polyadenyl binding proteins.		 -0.63 0.32 -0.29
83 AT5G47650 nudix hydrolase homolog 2 nudix hydrolase homolog 2,
ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 2, nudix
hydrolase homolog 2		 -0.63 0.3 -0.34
84 AT2G42850 cytochrome P450, family 718 cytochrome P450, family 718 0.63 0.31 -0.3
85 AT2G26020 plant defensin 1.2b plant defensin 1.2b 0.63 0.31 -0.32
86 AT2G44910 homeobox-leucine zipper protein 4 ARABIDOPSIS THALIANA
HOMEOBOX-LEUCINE ZIPPER PROTEIN 4,
homeobox-leucine zipper protein 4,
homeobox-leucine zipper protein 4		 -0.63 0.32 -0.31
87 AT2G41180 VQ motif-containing protein sigma factor binding protein 2 0.62 0.31 -0.31
88 AT2G46920 Protein phosphatase 2C family protein poltergeist -0.62 0.32 -0.35
89 AT5G14420 RING domain ligase2 RING domain ligase2 -0.62 0.31 -0.32
90 AT2G30800 helicase in vascular tissue and tapetum ATVT-1, helicase in vascular
tissue and tapetum		 -0.61 0.3 -0.32
91 AT5G11530 embryonic flower 1 (EMF1) embryonic flower 1 -0.61 0.31 -0.33
92 AT1G34120 inositol polyphosphate 5-phosphatase I AT5P1, MYO-INOSITOL POLYPHOSPHATE
5-PHOSPHATASE 1, ATIP5PI, inositol
polyphosphate 5-phosphatase I		 -0.61 0.31 -0.31
93 AT2G16380 Sec14p-like phosphatidylinositol transfer family protein 0.61 0.3 -0.31
94 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS -0.61 0.33 -0.33
95 AT5G04590 sulfite reductase sulfite reductase 0.61 0.33 -0.29
96 AT5G58720 smr (Small MutS Related) domain-containing protein -0.61 0.32 -0.3
97 AT3G22440 FRIGIDA-like protein -0.61 0.32 -0.3
98 AT4G27980 Domain of unknown function (DUF3444) 0.61 0.29 -0.33
99 AT1G28070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits
to 77 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.32 -0.31
100 AT3G63070 Tudor/PWWP/MBT domain-containing protein -0.6 0.31 -0.31
101 AT1G35250 Thioesterase superfamily protein -0.6 0.3 -0.34
102 AT2G42640 Mitogen activated protein kinase kinase kinase-related -0.6 0.34 -0.34
103 AT1G14400 ubiquitin carrier protein 1 ATUBC1, ubiquitin carrier protein
1, UBIQUITIN CONJUGATING ENZYME 1		 -0.6 0.32 -0.32
104 AT4G17730 syntaxin of plants 23 ATSYP23, syntaxin of plants 23 -0.6 0.32 -0.31
105 AT1G28470 NAC domain containing protein 10 NAC domain containing protein 10,
NAC domain containing protein 10,
SECONDARY WALL-ASSOCIATED NAC
DOMAIN PROTEIN 3		 -0.59 0.33 -0.31
106 AT1G64050 unknown protein; Has 524 Blast hits to 342 proteins in 101
species: Archae - 0; Bacteria - 106; Metazoa - 106; Fungi -
24; Plants - 25; Viruses - 0; Other Eukaryotes - 263
(source: NCBI BLink).		 -0.59 0.33 -0.33
107 AT5G55350 MBOAT (membrane bound O-acyl transferase) family protein -0.59 0.32 -0.33
108 AT2G43680 IQ-domain 14 IQ-domain 14 -0.59 0.29 -0.33
109 AT5G48150 GRAS family transcription factor phytochrome a signal transduction
1		 -0.59 0.32 -0.3
110 AT2G46760 D-arabinono-1,4-lactone oxidase family protein -0.58 0.31 -0.3
111 AT2G02760 ubiquiting-conjugating enzyme 2 ubiquiting-conjugating enzyme 2,
ubiquitin-conjugating enzyme 2,
ubiquiting-conjugating enzyme 2		 -0.58 0.32 -0.33
112 AT4G28703 RmlC-like cupins superfamily protein -0.58 0.3 -0.31
113 AT4G16680 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.58 0.34 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
114 C0240 Stigmasterol - Stigmasterol plant sterol biosynthesis -0.61 0.46 -0.41 C0240