AT3G15490 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G15490
Description Regulator of Vps4 activity in the MVB pathway protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G15490 Regulator of Vps4 activity in the MVB pathway protein 1 0.31 -0.33
2 AT2G34400 Pentatricopeptide repeat (PPR-like) superfamily protein 0.77 0.3 -0.33
3 AT3G42850 Mevalonate/galactokinase family protein 0.73 0.34 -0.32
4 AT5G08100 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 asparaginase A1 -0.73 0.32 -0.35
5 AT3G31920 transposable element gene 0.73 0.3 -0.32
6 AT4G03640 transposable element gene 0.72 0.31 -0.32
7 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 0.71 0.3 -0.3
8 AT1G05330 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.7 0.35 -0.31
9 AT3G44570 Arabidopsis retrotransposon ORF-1 protein -0.7 0.32 -0.3
10 AT3G11600 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.3 -0.32
11 AT3G32080 transposable element gene 0.69 0.32 -0.32
12 AT5G14990 BEST Arabidopsis thaliana protein match is: myosin heavy
chain-related (TAIR:AT2G34730.1); Has 8284 Blast hits to
6001 proteins in 578 species: Archae - 107; Bacteria - 678;
Metazoa - 3983; Fungi - 607; Plants - 315; Viruses - 16;
Other Eukaryotes - 2578 (source: NCBI BLink).		 -0.69 0.31 -0.33
13 AT1G62914 pentatricopeptide (PPR) repeat-containing protein 0.69 0.31 -0.3
14 AT3G05960 sugar transporter 6 SUGAR TRANSPORTER 6, sugar
transporter 6		 0.68 0.31 -0.31
15 AT5G40440 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase
kinase 3, mitogen-activated
protein kinase kinase 3		 -0.68 0.3 -0.3
16 AT5G46210 cullin4 ATCUL4, cullin4 0.68 0.32 -0.33
17 AT1G56145 Leucine-rich repeat transmembrane protein kinase 0.67 0.31 -0.31
18 AT5G37620 Cysteine/Histidine-rich C1 domain family protein 0.67 0.3 -0.32
19 AT4G00355 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits
to 97 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 ATG8-interacting protein 2 -0.67 0.31 -0.3
20 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein 0.67 0.3 -0.33
21 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 -0.66 0.31 -0.33
22 AT2G27280 Coiled-coil domain-containing protein 55 (DUF2040) -0.65 0.33 -0.32
23 AT1G26860 transposable element gene -0.65 0.32 -0.31
24 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.65 0.32 -0.33
25 AT5G28590 DNA-binding family protein 0.65 0.31 -0.33
26 AT1G54110 Membrane fusion protein Use1 -0.65 0.31 -0.33
27 AT5G07680 NAC domain containing protein 80 Arabidopsis NAC domain containing
protein 79, NAC domain containing
protein 80, ATNAC4, NAC domain
containing protein 80		 0.65 0.31 -0.33
28 AT3G43630 Vacuolar iron transporter (VIT) family protein 0.65 0.32 -0.31
29 AT1G61410 DNA double-strand break repair and VJ recombination XRCC4 -0.64 0.28 -0.32
30 AT2G21470 SUMO-activating enzyme 2 SUMO-ACTIVATING ENZYME 2, EMBRYO
DEFECTIVE 2764, SUMO-activating
enzyme 2		 0.64 0.32 -0.32
31 AT4G11730 Cation transporter/ E1-E2 ATPase family protein -0.64 0.33 -0.3
32 AT3G21180 autoinhibited Ca(2+)-ATPase 9 autoinhibited Ca(2+)-ATPase 9,
ATACA9		 0.64 0.33 -0.31
33 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 -0.64 0.3 -0.31
34 AT2G45610 alpha/beta-Hydrolases superfamily protein 0.63 0.31 -0.31
35 AT2G38890 unknown protein; Has 58 Blast hits to 54 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0;
Plants - 46; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.63 0.32 -0.32
36 AT5G54700 Ankyrin repeat family protein -0.63 0.32 -0.32
37 AT1G21220 transposable element gene -0.63 0.32 -0.31
38 AT4G18920 Protein of unknown function (DUF1264) -0.63 0.31 -0.32
39 AT1G09610 Protein of unknown function (DUF579) -0.63 0.32 -0.3
40 AT3G60120 beta glucosidase 27 beta glucosidase 27 -0.63 0.31 -0.31
41 AT5G48140 Pectin lyase-like superfamily protein -0.63 0.34 -0.31
42 AT1G47310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 45
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.29 -0.29
43 AT1G74320 Protein kinase superfamily protein -0.62 0.32 -0.32
44 AT5G54790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.3 -0.29
45 AT5G15070 Phosphoglycerate mutase-like family protein 0.62 0.31 -0.31
46 AT1G43810 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.32 -0.3
47 AT5G35820 transposable element gene -0.62 0.33 -0.32
48 AT1G64570 Homeodomain-like superfamily protein DUO POLLEN 3 0.62 0.28 -0.32
49 AT3G47230 transposable element gene -0.61 0.33 -0.32
50 AT4G35500 Protein kinase superfamily protein 0.61 0.3 -0.31
51 AT1G63590 Receptor-like protein kinase-related family protein -0.61 0.31 -0.33
52 AT4G21500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G05018.1); Has 20 Blast
hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.61 0.31 -0.31
53 ATMG00070 NADH dehydrogenase subunit 9 NADH dehydrogenase subunit 9 0.61 0.31 -0.32
54 AT5G51320 transposable element gene -0.6 0.31 -0.31
55 AT1G79350 RING/FYVE/PHD zinc finger superfamily protein embryo defective 1135 0.6 0.29 -0.32
56 AT3G22040 Domain of unknown function (DUF26) -0.6 0.31 -0.32
57 AT1G05770 Mannose-binding lectin superfamily protein -0.6 0.33 -0.32
58 AT1G29860 WRKY DNA-binding protein 71 WRKY DNA-BINDING PROTEIN 71, WRKY
DNA-binding protein 71		 -0.6 0.33 -0.32
59 AT4G36160 NAC domain containing protein 76 NAC domain containing protein 76,
NAC domain containing protein 76,
VASCULAR-RELATED NAC-DOMAIN 2		 -0.6 0.31 -0.32
60 AT1G51360 dimeric A/B barrel domainS-protein 1 DIMERIC A/B BARREL DOMAINS-PROTEIN
1, dimeric A/B barrel
domainS-protein 1		 -0.6 0.32 -0.32
61 AT2G33240 myosin XI D MYOSIN XI D, myosin XI D -0.59 0.31 -0.32
62 AT4G35350 xylem cysteine peptidase 1 xylem cysteine peptidase 1 -0.59 0.33 -0.33
63 AT1G07610 metallothionein 1C metallothionein 1C 0.59 0.31 -0.3
64 AT1G54790 GDSL-like Lipase/Acylhydrolase superfamily protein -0.59 0.34 -0.32
65 AT2G37730 Protein of unknown function (DUF604) 0.59 0.34 -0.31
66 AT1G49830 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.58 0.31 -0.32
67 AT2G14380 transposable element gene -0.58 0.32 -0.31
68 AT2G33000 ubiquitin-associated (UBA)/TS-N domain-containing
protein-related		 -0.58 0.3 -0.32
69 AT4G16447 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.58 0.33 -0.33
70 AT4G04440 transposable element gene -0.58 0.31 -0.31
71 AT5G64800 CLAVATA3/ESR-RELATED 21 CLAVATA3/ESR-RELATED 21 -0.58 0.33 -0.29
72 AT3G32060 transposable element gene -0.58 0.33 -0.3
73 AT2G05950 transposable element gene -0.58 0.34 -0.33
74 AT4G23220 cysteine-rich RLK (RECEPTOR-like protein kinase) 14 cysteine-rich RLK (RECEPTOR-like
protein kinase) 14		 -0.58 0.3 -0.33
75 AT4G13960 F-box/RNI-like superfamily protein -0.57 0.32 -0.3
76 AT1G48330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits
to 40 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.29 -0.32
77 AT4G00700 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.57 0.31 -0.35
78 AT5G25380 cyclin a2;1 cyclin a2;1 -0.57 0.31 -0.31
79 AT5G57260 cytochrome P450, family 71, subfamily B, polypeptide 10 cytochrome P450, family 71,
subfamily B, polypeptide 10		 -0.56 0.3 -0.32
80 AT5G07930 MEI2 C-terminal RRM only like 2 MEI2 C-terminal RRM only like 2 -0.56 0.33 -0.31
81 AT4G04530 transposable element gene -0.56 0.31 -0.33
82 AT4G00440 Protein of unknown function (DUF3741) -0.56 0.29 -0.29
83 AT5G17260 NAC domain containing protein 86 NAC domain containing protein 86,
NAC domain containing protein 86		 -0.55 0.33 -0.31
84 AT5G42440 Protein kinase superfamily protein -0.55 0.31 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
85 C0124 Isonicotinic acid - - - 0.71 0.49 -0.44
86 C0146 Mannitol D-Mannitol Mannitol mannitol degradation II -0.67 0.43 -0.45 C0146
87 C0219 Pyroglutamic acid (2R,2S)-Pyroglutamic acid 5-Oxoproline gamma-glutamyl cycle (plant pathway),
gamma-glutamyl cycle 		-0.55 0.32 -0.32 C0219
88 C0004 β-Alanine - β-Alanine uracil degradation II (reductive),
pantothenate biosynthesis,
beta-alanine biosynthesis II,
beta-alanine biosynthesis I 		-0.55 0.32 -0.31 C0004