AT3G15390 : silencing defective 5
Query Information
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AGICode AT3G15390
Description silencing defective 5
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G15390 silencing defective 5 silencing defective 5 1 0.31 -0.32
2 AT3G15040 Protein of unknown function, DUF584 -0.73 0.32 -0.32
3 AT1G70250 receptor serine/threonine kinase, putative 0.7 0.3 -0.31
4 AT1G01510 NAD(P)-binding Rossmann-fold superfamily protein ANGUSTIFOLIA -0.7 0.3 -0.32
5 AT2G15325 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.7 0.31 -0.31
6 AT1G02960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02965.1); Has 83 Blast hits
to 82 proteins in 37 species: Archae - 0; Bacteria - 2;
Metazoa - 20; Fungi - 7; Plants - 29; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 0.67 0.31 -0.31
7 AT4G04550 transposable element gene -0.67 0.31 -0.31
8 AT1G31240 Bromodomain transcription factor -0.67 0.3 -0.31
9 AT1G75250 RAD-like 6 RAD-like 6, RAD-like 6,
RADIALIS-LIKE SANT/MYB 3		 -0.67 0.34 -0.3
10 AT1G06390 GSK3/SHAGGY-like protein kinase 1 ATGSK1, A. THALIANA SHAGGY-LIKE
KINASE GROUP 2 3, SHAGGY-LIKE
PROTEIN KINASE 22, BIN2-LIKE 2,
GSK3/SHAGGY-like protein kinase 1,
SHAGGY-LIKE PROTEIN KINASE 22		 -0.67 0.32 -0.32
11 AT5G61250 glucuronidase 1 glucuronidase 1, glucuronidase 1 0.66 0.31 -0.31
12 AT4G27880 Protein with RING/U-box and TRAF-like domains -0.66 0.32 -0.31
13 AT3G11760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.3 -0.32
14 AT3G14070 cation exchanger 9 CATION CALCIUM EXCHANGER 3, cation
exchanger 9, CATION CALCIUM
EXCHANGER 3		 -0.65 0.32 -0.32
15 AT4G32240 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.65 0.33 -0.31
16 AT3G45730 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.31 -0.32
17 AT5G10790 ubiquitin-specific protease 22 ubiquitin-specific protease 22 -0.65 0.29 -0.32
18 AT4G27370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 MYOSIN VIII B, VIIIB 0.65 0.32 -0.31
19 AT3G16910 acyl-activating enzyme 7 acyl-activating enzyme 7, ACETATE
NON-UTILIZING 1		 0.64 0.31 -0.32
20 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein 0.64 0.29 -0.33
21 AT1G57906 unknown protein; BEST Arabidopsis thaliana protein match
is: F-box family protein with a domain of unknown function
(DUF295) (TAIR:AT2G17690.1); Has 57 Blast hits to 57
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.64 0.3 -0.33
22 AT5G20610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits
to 759 proteins in 180 species: Archae - 6; Bacteria - 105;
Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other
Eukaryotes - 282 (source: NCBI BLink).		 -0.64 0.33 -0.29
23 AT2G19250 pseudogene, similar to Magnesium-chelatase subunit chlD,
chloroplast precursor (Mg- protoporphyrin IX chelatase)
(Mg-chelatase subunit D). (Common tobacco), similar to
SP|O24133 Magnesium-chelatase subunit chlD, chloroplast
precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase
subunit D) {Nicotiana tabacum}; blastp match of 78%
identity and 5.0e-07 P-value to SP|O24133|CHLD_TOBAC
Magnesium-chelatase subunit chlD, chloroplast precursor
(Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D).
(Common tobacco) {Nicotiana tabacum}		 0.64 0.3 -0.31
24 AT4G17060 FRIGIDA interacting protein 2 FRIGIDA interacting protein 2 -0.63 0.32 -0.33
25 AT4G04300 transposable element gene -0.63 0.33 -0.31
26 AT3G11620 alpha/beta-Hydrolases superfamily protein 0.63 0.29 -0.31
27 AT1G26270 Phosphatidylinositol 3- and 4-kinase family protein -0.63 0.31 -0.32
28 AT3G04900 Heavy metal transport/detoxification superfamily protein -0.63 0.31 -0.3
29 AT2G38670 phosphorylethanolamine cytidylyltransferase 1 phosphorylethanolamine
cytidylyltransferase 1		 -0.63 0.3 -0.33
30 AT2G30290 VACUOLAR SORTING RECEPTOR 2 AtVSR2, binding protein of 80 kDa
1;2, VACUOLAR SORTING RECEPTOR
1;2, VACUOLAR SORTING RECEPTOR 2		 0.63 0.31 -0.31
31 AT1G15960 NRAMP metal ion transporter 6 ATNRAMP6, NRAMP metal ion
transporter 6		 0.63 0.31 -0.32
32 AT2G19400 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 0.63 0.31 -0.33
33 AT3G46200 nudix hydrolase homolog 9 nudix hydrolase homolog 9, nudix
hydrolase homolog 9		 0.63 0.31 -0.33
34 AT2G19420 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.32 -0.32
35 AT1G65220 ARM repeat superfamily protein -0.63 0.32 -0.3
36 AT4G15755 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.62 0.32 -0.33
37 AT4G35820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.62 0.31 -0.32
38 AT5G37960 GroES-like family protein 0.62 0.32 -0.31
39 AT1G77610 EamA-like transporter family protein -0.62 0.32 -0.3
40 AT1G02050 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 6 0.62 0.31 -0.3
41 AT1G30950 F-box family protein UNUSUAL FLORAL ORGANS 0.62 0.34 -0.31
42 AT2G14420 transposable element gene 0.62 0.32 -0.33
43 AT1G28200 FH interacting protein 1 FH interacting protein 1 -0.62 0.32 -0.29
44 AT2G39120 Ubiquitin carboxyl-terminal hydrolase family protein what's this factor 9 -0.62 0.3 -0.32
45 AT1G17600 Disease resistance protein (TIR-NBS-LRR class) family 0.62 0.31 -0.32
46 AT4G07640 transposable element gene 0.62 0.32 -0.3
47 AT3G29792 transposable element gene 0.61 0.32 -0.33
48 AT1G31600 RNA-binding (RRM/RBD/RNP motifs) family protein Arabidopsis thaliana tRNA
methyltransferase 9, tRNA
methyltransferase 9		 0.61 0.31 -0.32
49 AT3G51550 Malectin/receptor-like protein kinase family protein FERONIA -0.61 0.29 -0.32
50 AT2G32710 Cyclin-dependent kinase inhibitor family protein CYCLIN-DEPENDENT KINASE INHIBITOR
2, INTERACTORS OF CDC2 KINASE 7,
KRP4, KIP-RELATED PROTEIN 4		 -0.61 0.33 -0.33
51 AT3G61010 Ferritin/ribonucleotide reductase-like family protein 0.61 0.34 -0.3
52 AT2G01890 purple acid phosphatase 8 PURPLE ACID PHOSPHATASE 8, purple
acid phosphatase 8		 -0.61 0.31 -0.31
53 AT3G15730 phospholipase D alpha 1 PLD, phospholipase D alpha 1 -0.61 0.3 -0.31
54 AT4G22680 myb domain protein 85 myb domain protein 85, myb domain
protein 85		 0.6 0.32 -0.3
55 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.31 -0.32
56 AT4G17585 Aluminium activated malate transporter family protein 0.6 0.31 -0.33
57 AT4G24260 glycosyl hydrolase 9A3 glycosyl hydrolase 9A3, glycosyl
hydrolase 9A3, KOR3		 0.6 0.32 -0.29
58 AT5G59270 Concanavalin A-like lectin protein kinase family protein 0.6 0.29 -0.33
59 AT5G24140 squalene monooxygenase 2 squalene monooxygenase 2 -0.6 0.31 -0.31
60 AT4G30570 Glucose-1-phosphate adenylyltransferase family protein 0.6 0.31 -0.31
61 AT5G60110 pumilio 18 pumilio 18, pumilio 18 -0.6 0.31 -0.31
62 AT4G26280 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.6 0.33 -0.31
63 AT3G11980 Jojoba acyl CoA reductase-related male sterility protein FATTY ACID REDUCTASE 2, MALE
STERILITY 2		 0.6 0.31 -0.33
64 AT2G39720 RING-H2 finger C2A RING-H2 finger C2A -0.6 0.29 -0.35
65 AT3G61580 Fatty acid/sphingolipid desaturase AtSLD1, sphingoid LCB desaturase 1 -0.6 0.33 -0.31
66 AT5G26880 AGAMOUS-like 26 AGAMOUS-like 26 0.6 0.29 -0.32
67 AT5G41940 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.59 0.32 -0.3
68 AT1G56030 RING/U-box superfamily protein 0.59 0.33 -0.31
69 AT1G30900 VACUOLAR SORTING RECEPTOR 6 binding protein of 80 kDa 3;3,
VACUOLAR SORTING RECEPTOR 3;3,
VACUOLAR SORTING RECEPTOR 6		 0.59 0.34 -0.3
70 AT5G21010 BTB-POZ and MATH domain 5 BTB-POZ AND MATH DOMAIN 5, BTB-POZ
and MATH domain 5		 -0.59 0.31 -0.34
71 AT2G02350 SKP1 interacting partner 3 Phloem protein 2-B9, SKP1
interacting partner 3		 0.59 0.32 -0.33
72 AT3G06280 F-box associated ubiquitination effector family protein 0.59 0.3 -0.31
73 AT5G03520 RAB GTPase homolog 8C ARABIDOPSIS RAB HOMOLOG E1D, RAB
GTPase homolog 8C, ATRABE1D, RAB
HOMOLOG E1D, RAB GTPase homolog 8C		 -0.59 0.34 -0.32
74 AT5G61920 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G67170.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.59 0.31 -0.3
75 AT1G20920 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.31 -0.33
76 AT1G46696 Protein of unknown function, DUF601 -0.59 0.33 -0.31
77 AT3G48120 unknown protein; Has 22990 Blast hits to 12942 proteins in
666 species: Archae - 8; Bacteria - 739; Metazoa - 13803;
Fungi - 2465; Plants - 1363; Viruses - 116; Other
Eukaryotes - 4496 (source: NCBI BLink).		 0.58 0.31 -0.32
78 AT3G01580 Tetratricopeptide repeat (TPR)-like superfamily protein -0.58 0.32 -0.31
79 AT3G28510 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.58 0.34 -0.33
80 AT4G31280 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.31 -0.31
81 AT5G24440 CTC-interacting domain 13 CTC-interacting domain 13 0.58 0.32 -0.33
82 AT2G21460 transposable element gene -0.58 0.31 -0.31
83 AT3G26640 Transducin/WD40 repeat-like superfamily protein LIGHT-REGULATED WD 2 -0.58 0.33 -0.31
84 AT2G19550 alpha/beta-Hydrolases superfamily protein 0.58 0.31 -0.29
85 AT5G02680 LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: methionine--tRNA
ligase, putative / methionyl-tRNA synthetase, putative /
MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to
252 proteins in 89 species: Archae - 0; Bacteria - 71;
Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.58 0.32 -0.32
86 AT3G33064 transposable element gene -0.58 0.31 -0.33
87 AT1G05490 chromatin remodeling 31 chromatin remodeling 31 -0.58 0.31 -0.32
88 AT5G59190 subtilase family protein 0.57 0.3 -0.33
89 AT1G70040 Protein of unknown function (DUF1163) -0.57 0.34 -0.31
90 AT5G62030 diphthamide synthesis DPH2 family protein -0.57 0.31 -0.29
91 AT4G33710 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.57 0.31 -0.34
92 AT3G06650 ATP-citrate lyase B-1 ATP-citrate lyase B-1 -0.57 0.33 -0.31
93 AT3G24330 O-Glycosyl hydrolases family 17 protein 0.57 0.3 -0.32
94 AT2G04063 glycine-rich protein -0.57 0.31 -0.31
95 AT4G20490 transposable element gene 0.57 0.33 -0.3
96 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 0.57 0.32 -0.31
97 AT2G43220 Cysteine/Histidine-rich C1 domain family protein -0.57 0.31 -0.32
98 AT2G38100 proton-dependent oligopeptide transport (POT) family
protein		 -0.56 0.29 -0.3
99 AT1G20330 sterol methyltransferase 2 COTYLEDON VASCULAR PATTERN 1,
FRILL1, sterol methyltransferase 2		 -0.56 0.32 -0.33
100 AT1G33680 KH domain-containing protein -0.56 0.3 -0.32
101 AT1G66150 transmembrane kinase 1 transmembrane kinase 1 -0.56 0.33 -0.31
102 AT1G02340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 FBI1, LONG HYPOCOTYL IN FAR-RED,
REDUCED PHYTOCHROME SIGNALING 1,
REDUCED SENSITIVITY TO FAR-RED
LIGHT 1		 -0.56 0.32 -0.33
103 AT3G15420 Transcription factor TFIIIC, tau55-related protein 0.56 0.34 -0.3
104 AT4G31680 Transcriptional factor B3 family protein 0.56 0.31 -0.35
105 AT2G40530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf apex, inflorescence
meristem, petal, flower; EXPRESSED DURING: 4 anthesis,
petal differentiation and expansion stage; Has 5 Blast hits
to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.32 -0.3
106 AT3G13060 evolutionarily conserved C-terminal region 5 evolutionarily conserved
C-terminal region 5		 -0.56 0.32 -0.32
107 AT3G62660 galacturonosyltransferase-like 7 galacturonosyltransferase-like 7 -0.56 0.31 -0.31
108 AT3G11870 Endoribonuclease/protein kinase IRE1-like 0.56 0.32 -0.31
109 AT3G31360 transposable element gene 0.56 0.31 -0.31
110 AT2G35030 Pentatricopeptide repeat (PPR) superfamily protein -0.56 0.33 -0.33
111 AT1G54310 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.56 0.33 -0.33
112 AT2G26450 Plant invertase/pectin methylesterase inhibitor superfamily 0.55 0.31 -0.3
113 AT1G68875 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, leaf whorl,
sepal, flower, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; Has 4 Blast hits to 4
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.55 0.3 -0.32
114 AT5G15250 FTSH protease 6 ATFTSH6, FTSH protease 6 0.55 0.3 -0.33
115 AT4G31740 Sec1/munc18-like (SM) proteins superfamily 0.55 0.32 -0.3
116 AT2G45920 U-box domain-containing protein 0.55 0.31 -0.3
117 AT2G02960 RING/FYVE/PHD zinc finger superfamily protein 0.55 0.32 -0.3
118 AT1G34750 Protein phosphatase 2C family protein 0.55 0.31 -0.3