AT3G15430 : -
Query Information
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AGICode AT3G15430
Description Regulator of chromosome condensation (RCC1) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G15430 Regulator of chromosome condensation (RCC1) family protein 1 0.31 -0.3
2 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING 0.76 0.32 -0.31
3 AT1G78800 UDP-Glycosyltransferase superfamily protein 0.74 0.31 -0.3
4 AT1G48970 NagB/RpiA/CoA transferase-like superfamily protein 0.74 0.3 -0.32
5 AT3G44940 Protein of unknown function (DUF1635) -0.72 0.29 -0.3
6 AT1G01040 dicer-like 1 ABNORMAL SUSPENSOR 1, DICER-LIKE
1, CARPEL FACTORY, dicer-like 1,
EMBRYO DEFECTIVE 60, EMBRYO
DEFECTIVE 76, SHORT INTEGUMENTS 1,
SUSPENSOR 1		 0.72 0.32 -0.32
7 AT1G59610 dynamin-like 3 dynamin-like 3, CF1, dynamin-like
3, Dynamin related protein 2B		 0.71 0.3 -0.3
8 AT5G56620 NAC domain containing protein 99 NAC domain containing protein 99,
NAC domain containing protein 99		 -0.69 0.31 -0.32
9 AT2G01090 Ubiquinol-cytochrome C reductase hinge protein -0.69 0.32 -0.32
10 AT1G07160 Protein phosphatase 2C family protein 0.69 0.31 -0.32
11 AT3G24180 Beta-glucosidase, GBA2 type family protein 0.68 0.31 -0.32
12 AT5G55600 agenet domain-containing protein / bromo-adjacent homology
(BAH) domain-containing protein		 0.68 0.32 -0.33
13 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 0.67 0.36 -0.3
14 AT1G48360 zinc ion binding;nucleic acid binding;hydrolases, acting on
acid anhydrides, in phosphorus-containing anhydrides		 0.67 0.31 -0.32
15 AT2G17450 RING-H2 finger A3A RING-H2 finger A3A -0.67 0.3 -0.3
16 AT1G62260 mitochondrial editing factor 9 mitochondrial editing factor 9 0.66 0.32 -0.32
17 AT1G21630 Calcium-binding EF hand family protein 0.66 0.34 -0.3
18 AT3G50590 Transducin/WD40 repeat-like superfamily protein 0.65 0.3 -0.3
19 AT5G06600 ubiquitin-specific protease 12 AtUBP12, ubiquitin-specific
protease 12		 0.65 0.31 -0.35
20 AT5G61600 ethylene response factor 104 ethylene response factor 104 -0.65 0.31 -0.3
21 AT5G38840 SMAD/FHA domain-containing protein 0.64 0.31 -0.32
22 AT3G10380 subunit of exocyst complex 8 SUBUNIT OF EXOCYST COMPLEX 8,
subunit of exocyst complex 8		 0.64 0.32 -0.31
23 AT1G79730 hydroxyproline-rich glycoprotein family protein EARLY FLOWERING 7 0.64 0.31 -0.3
24 AT2G41020 WW domain-containing protein 0.64 0.3 -0.33
25 AT1G45000 AAA-type ATPase family protein 0.64 0.31 -0.33
26 AT2G21185 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.32 -0.29
27 AT4G38200 SEC7-like guanine nucleotide exchange family protein 0.63 0.33 -0.31
28 AT4G35890 winged-helix DNA-binding transcription factor family
protein		 0.63 0.32 -0.31
29 AT3G13750 beta galactosidase 1 beta galactosidase 1,
beta-galactosidase 1		 -0.63 0.32 -0.33
30 AT5G11070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.63 0.3 -0.32
31 AT1G31870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol, nucleus; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2050,
pre-mRNA-splicing factor (InterPro:IPR018609); Has 13303
Blast hits to 9618 proteins in 489 species: Archae - 8;
Bacteria - 444; Metazoa - 7153; Fungi - 2294; Plants - 942;
Viruses - 128; Other Eukaryotes - 2334 (source: NCBI
BLink).		 0.63 0.32 -0.3
32 AT3G10650 BEST Arabidopsis thaliana protein match is:
nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast
hits to 31782 proteins in 2093 species: Archae - 202;
Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants -
1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI
BLink).		 AtNUP1, NUP1 0.63 0.35 -0.32
33 AT1G29870 tRNA synthetase class II (G, H, P and S) family protein -0.63 0.32 -0.33
34 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein 0.62 0.31 -0.32
35 AT2G45540 WD-40 repeat family protein / beige-related 0.62 0.32 -0.29
36 AT3G51120 DNA binding;zinc ion binding;nucleic acid binding;nucleic
acid binding		 0.62 0.3 -0.33
37 AT5G49900 Beta-glucosidase, GBA2 type family protein 0.62 0.32 -0.3
38 AT3G32940 RNA-binding KH domain-containing protein 0.62 0.32 -0.31
39 AT1G23000 Heavy metal transport/detoxification superfamily protein -0.62 0.32 -0.32
40 AT1G13700 6-phosphogluconolactonase 1 6-phosphogluconolactonase 1 -0.62 0.28 -0.32
41 AT1G56620 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.62 0.31 -0.33
42 AT2G07360 SH3 domain-containing protein 0.62 0.31 -0.3
43 AT1G18950 DDT domain superfamily 0.62 0.32 -0.34
44 AT2G19010 GDSL-like Lipase/Acylhydrolase superfamily protein -0.62 0.3 -0.3
45 AT1G35370 transposable element gene -0.61 0.3 -0.3
46 AT2G39480 P-glycoprotein 6 ATP-binding cassette B6,
P-glycoprotein 6		 0.61 0.31 -0.32
47 AT3G13782 nucleosome assembly protein1;4 nucleosome assembly protein1;4,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 4		 0.61 0.31 -0.32
48 AT4G27710 cytochrome P450, family 709, subfamily B, polypeptide 3 cytochrome P450, family 709,
subfamily B, polypeptide 3		 -0.61 0.33 -0.33
49 AT1G47210 cyclin-dependent protein kinase 3;2 cyclin-dependent protein kinase
3;2		 -0.61 0.33 -0.31
50 AT1G75600 Histone superfamily protein -0.61 0.34 -0.3
51 AT4G04630 Protein of unknown function, DUF584 -0.61 0.33 -0.32
52 AT5G01290 mRNA capping enzyme family protein 0.61 0.32 -0.34
53 AT4G32730 Homeodomain-like protein ATMYB3R-1, ARABIDOOSIS THALIANA
MYB DOMAIN PROTEIN 3R1, MYB DOMAIN
PROTEIN 3R1, C-MYB-LIKE
TRANSCRIPTION FACTOR 3R-1, PC-MYB1		 0.61 0.3 -0.32
54 AT4G12690 Plant protein of unknown function (DUF868) -0.61 0.33 -0.33
55 AT1G67880 beta-1,4-N-acetylglucosaminyltransferase family protein -0.6 0.32 -0.33
56 AT3G13225 WW domain-containing protein 0.6 0.32 -0.33
57 AT5G11040 TRS120 AtTRS120, TRS120 0.6 0.33 -0.32
58 AT1G54740 Protein of unknown function (DUF3049) -0.6 0.36 -0.31
59 AT2G44200 CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA
splicing factor		 0.6 0.31 -0.33
60 AT1G28420 homeobox-1 homeobox-1 0.59 0.31 -0.29
61 AT3G56930 DHHC-type zinc finger family protein 0.59 0.32 -0.32
62 AT1G54420 unknown protein; Has 9 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI
BLink).		 -0.59 0.3 -0.31
63 AT1G75550 glycine-rich protein 0.59 0.31 -0.32
64 AT2G33350 CCT motif family protein -0.59 0.32 -0.32
65 AT3G05670 RING/U-box protein 0.59 0.29 -0.33
66 AT1G79990 structural molecules 0.59 0.34 -0.33
67 AT1G15220 cytochrome c biogenesis protein family ATCCMH, CCMH -0.58 0.33 -0.33
68 AT3G44340 clone eighty-four clone eighty-four 0.58 0.33 -0.33
69 AT5G54000 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.58 0.31 -0.33
70 AT4G03670 transposable element gene -0.58 0.32 -0.33
71 AT1G23390 Kelch repeat-containing F-box family protein -0.58 0.32 -0.33
72 AT1G27360 squamosa promoter-like 11 squamosa promoter-like 11 0.58 0.3 -0.32
73 AT3G18480 CCAAT-displacement protein alternatively spliced product CCAAT-displacement protein
alternatively spliced product,
CCAAT-displacement protein
alternatively spliced product		 0.58 0.3 -0.32
74 AT1G75110 Nucleotide-diphospho-sugar transferase family protein REDUCED RESIDUAL ARABINOSE 2 -0.57 0.3 -0.31
75 AT5G34895 transposable element gene -0.57 0.32 -0.32
76 AT5G08480 VQ motif-containing protein -0.57 0.31 -0.31
77 AT5G28280 pseudogene, sterol desaturase domain-containing protein,
CER1-like, A.thaliana, ATCER1L19; blastp match of 55%
identity and 8.9e-22 P-value to
GP|4769012|gb|AAD29719.1|AF143746_1|AF143746 CER1 {Oryza
sativa}		 -0.57 0.31 -0.34
78 AT5G11460 Protein of unknown function (DUF581) -0.57 0.33 -0.32
79 AT4G29600 Cytidine/deoxycytidylate deaminase family protein -0.57 0.31 -0.32
80 AT4G27530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G53895.1); Has 14 Blast hits
to 14 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.31 -0.31
81 AT5G43830 Aluminium induced protein with YGL and LRDR motifs -0.56 0.32 -0.32
82 AT4G07450 transposable element gene -0.56 0.31 -0.32
83 AT5G47830 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.56 0.31 -0.33
84 AT1G54840 HSP20-like chaperones superfamily protein -0.55 0.32 -0.31
85 AT5G17350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 15 plant
structures; EXPRESSED DURING: 8 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.55 0.32 -0.31
86 AT2G13430 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.31 -0.3
87 AT1G64250 transposable element gene -0.55 0.32 -0.35
88 AT5G49050 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to stress; LOCATED IN: cellular_component unknown;
CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016),
Rossmann-like alpha/beta/alpha sandwich fold
(InterPro:IPR014729); BEST Arabidopsis thaliana protein
match is: Adenine nucleotide alpha hydrolases-like
superfamily protein (TAIR:AT2G47710.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.55 0.32 -0.32
89 AT3G30150 transposable element gene -0.55 0.32 -0.3
90 AT1G50050 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.54 0.31 -0.31
91 AT4G04690 F-box and associated interaction domains-containing protein -0.54 0.3 -0.31
92 AT1G70360 F-box family protein -0.54 0.33 -0.32
93 AT1G15190 Fasciclin-like arabinogalactan family protein -0.54 0.3 -0.33
94 AT4G25470 C-repeat/DRE binding factor 2 ATCBF2, C-repeat/DRE binding
factor 2, DRE/CRT-BINDING PROTEIN
1C, FREEZING TOLERANCE QTL 4		 -0.54 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0145 Maltotetraose - Maltotetraose starch degradation II 0.73 0.46 -0.5 C0145
96 C0124 Isonicotinic acid - - - 0.65 0.43 -0.44