AT3G16680 : -
Query Information
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AGICode AT3G16680
Description DNA binding;DNA-directed RNA polymerases
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G16680 DNA binding;DNA-directed RNA polymerases 1 0.31 -0.32
2 AT2G15740 C2H2-like zinc finger protein 0.69 0.32 -0.31
3 AT5G45850 Protein of unknown function (DUF688) 0.65 0.3 -0.34
4 AT3G30280 HXXXD-type acyl-transferase family protein 0.62 0.32 -0.31
5 AT2G45680 TCP family transcription factor 0.62 0.31 -0.32
6 AT1G12750 RHOMBOID-like protein 6 RHOMBOID-like protein 6,
RHOMBOID-like protein 6		 0.62 0.28 -0.3
7 AT5G67550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: 4 anthesis; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits
to 154 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.3 -0.32
8 AT4G15910 drought-induced 21 drought-induced 21,
drought-induced 21		 -0.62 0.32 -0.29
9 AT1G65620 Lateral organ boundaries (LOB) domain family protein ASYMMETRIC LEAVES 2 0.6 0.28 -0.32
10 AT2G16810 F-box and associated interaction domains-containing protein 0.6 0.33 -0.28
11 AT2G29510 Protein of unknown function (DUF3527) 0.59 0.31 -0.3
12 AT1G22990 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 22		 -0.59 0.32 -0.31
13 AT1G42365 transposable element gene 0.59 0.32 -0.31
14 AT3G20740 Transducin/WD40 repeat-like superfamily protein FERTILIZATION-INDEPENDENT
ENDOSPERM,
FERTILIZATION-INDEPENDENT
ENDOSPERM 1, FIS3		 0.59 0.3 -0.3
15 AT3G54940 Papain family cysteine protease -0.59 0.3 -0.3
16 AT1G66780 MATE efflux family protein 0.58 0.3 -0.32
17 AT1G30515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 16 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G21740.1); Has 20 Blast hits to 20 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.58 0.34 -0.3
18 AT1G32180 cellulose synthase-like D6 cellulose synthase-like D6,
CELLULOSE SYNTHASE LIKE D6,
cellulose synthase-like D6		 0.57 0.32 -0.32
19 AT1G49220 RING/U-box superfamily protein 0.57 0.33 -0.32
20 AT2G47270 sequence-specific DNA binding transcription
factors;transcription regulators		 UPBEAT1 -0.57 0.31 -0.32
21 AT5G65580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.57 0.32 -0.32
22 AT4G22400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G18320.2); Has 44 Blast hits
to 44 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.3 -0.3
23 AT1G17390 transposable element gene 0.56 0.32 -0.32
24 AT4G39370 ubiquitin-specific protease 27 ubiquitin-specific protease 27 0.56 0.32 -0.32
25 AT1G23380 KNOTTED1-like homeobox gene 6 KNOTTED1-like homeobox gene 6,
KNAT6L, KNAT6S		 -0.56 0.31 -0.31
26 AT1G79360 organic cation/carnitine transporter 2 organic cation/carnitine
transporter 2, ORGANIC CATION
TRANSPORTER 2, organic
cation/carnitine transporter 2		 -0.56 0.32 -0.32
27 AT2G46360 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.32 -0.33
28 AT5G12480 calmodulin-domain protein kinase 7 calmodulin-domain protein kinase 7 -0.55 0.3 -0.29
29 AT5G06080 LOB domain-containing protein 33 LOB domain-containing protein 33 -0.55 0.32 -0.32
30 AT2G39120 Ubiquitin carboxyl-terminal hydrolase family protein what's this factor 9 -0.55 0.32 -0.33
31 AT5G61570 Protein kinase superfamily protein 0.54 0.32 -0.31
32 AT5G03510 C2H2-type zinc finger family protein 0.54 0.3 -0.33
33 AT2G21920 F-box associated ubiquitination effector family protein 0.54 0.32 -0.32
34 AT3G04460 peroxin-12 ABERRANT PEROXISOME MORPHOLOGY 4,
PEROXIN-12, peroxin-12		 0.54 0.32 -0.33
35 AT4G28430 Reticulon family protein 0.53 0.32 -0.32
36 AT5G40300 Uncharacterised protein family (UPF0497) -0.53 0.3 -0.31
37 AT1G32430 F-box and associated interaction domains-containing protein 0.53 0.31 -0.34
38 AT3G31430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast
hits to 291 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.53 0.31 -0.32
39 AT1G25530 Transmembrane amino acid transporter family protein -0.52 0.32 -0.3
40 AT1G71696 carboxypeptidase D, putative SUPPRESSOR OF LLP1 1 0.52 0.32 -0.33
41 AT3G29210 transposable element gene 0.52 0.33 -0.3
42 AT5G43690 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.52 0.33 -0.32
43 AT1G06225 CLAVATA3/ESR-RELATED 3 CLAVATA3/ESR-RELATED 3 0.51 0.32 -0.31
44 AT1G44090 gibberellin 20-oxidase 5 ARABIDOPSIS THALIANA GIBBERELLIN
20-OXIDASE 5, gibberellin
20-oxidase 5		 -0.51 0.33 -0.33
45 AT4G36710 GRAS family transcription factor Arabidopsis thaliana HAIRY
MERISTEM 4, HAM4		 0.51 0.29 -0.32
46 AT3G16280 Integrase-type DNA-binding superfamily protein 0.51 0.31 -0.3
47 AT1G68040 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.51 0.31 -0.31
48 AT3G29260 NAD(P)-binding Rossmann-fold superfamily protein -0.51 0.31 -0.34
49 AT5G62180 carboxyesterase 20 carboxyesterase 20,
carboxyesterase 20		 -0.5 0.31 -0.31
50 AT1G64470 Ubiquitin-like superfamily protein -0.49 0.32 -0.32
51 AT1G42560 Seven transmembrane MLO family protein ARABIDOPSIS THALIANA MILDEW
RESISTANCE LOCUS O 9, MILDEW
RESISTANCE LOCUS O 9		 -0.49 0.29 -0.33
52 AT4G26050 plant intracellular ras group-related LRR 8 plant intracellular ras
group-related LRR 8		 -0.48 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
53 C0230 Rutin - - polyphenol biosynthesis -0.72 0.47 -0.43
54 C0201 Phosphatidylglycerol-32:1 - Phosphatidylglycerol-32:1 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.52 0.33 -0.32