AGICode | AT3G16730 |
Description | CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex, subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to 211 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G16730 | CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex, subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to 211 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). |
hypersensitive to excess boron 2 | 1 | 0.32 | -0.33 | ||
2 | AT1G11260 | sugar transporter 1 | SUGAR TRANSPORTER 1, sugar transporter 1 |
0.74 | 0.29 | -0.33 | ||
3 | AT1G36150 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.71 | 0.31 | -0.31 | |||
4 | AT4G29000 | Tesmin/TSO1-like CXC domain-containing protein | 0.69 | 0.32 | -0.33 | |||
5 | AT2G22910 | N-acetyl-l-glutamate synthase 1 | N-acetyl-l-glutamate synthase 1 | -0.68 | 0.31 | -0.3 | ||
6 | AT5G61140 | U5 small nuclear ribonucleoprotein helicase | -0.68 | 0.31 | -0.31 | |||
7 | AT3G20620 | F-box family protein-related | -0.67 | 0.32 | -0.29 | |||
8 | AT3G05390 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G01240.1); Has 507 Blast hits to 498 proteins in 33 species: Archae - 4; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.67 | 0.31 | -0.32 | |||
9 | AT1G12470 | zinc ion binding | -0.66 | 0.3 | -0.32 | |||
10 | AT3G50080 | VIER F-box proteine 2 | VIER F-box proteine 2 | -0.66 | 0.31 | -0.33 | ||
11 | AT4G39420 | unknown protein; Has 46 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.65 | 0.32 | -0.32 | |||
12 | AT3G03590 | SWIB/MDM2 domain superfamily protein | 0.65 | 0.32 | -0.31 | |||
13 | AT3G27810 | myb domain protein 21 | myb domain protein 21, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3, myb domain protein 21 |
-0.65 | 0.3 | -0.33 | ||
14 | AT1G34210 | somatic embryogenesis receptor-like kinase 2 | ATSERK2, somatic embryogenesis receptor-like kinase 2 |
-0.64 | 0.33 | -0.31 | ||
15 | AT1G71820 | SEC6 | SEC6 | -0.64 | 0.31 | -0.27 | ||
16 | AT3G47420 | phosphate starvation-induced gene 3 | Glycerol-3-phosphate permease 1, phosphate starvation-induced gene 3, Glycerol-3-phosphate permease 1, phosphate starvation-induced gene 3 |
-0.64 | 0.32 | -0.3 | ||
17 | AT4G35930 | F-box family protein | 0.64 | 0.32 | -0.31 | |||
18 | AT1G23550 | similar to RCD one 2 | similar to RCD one 2 | -0.64 | 0.3 | -0.33 | ||
19 | AT3G58690 | Protein kinase superfamily protein | 0.64 | 0.32 | -0.32 | |||
20 | AT4G13020 | Protein kinase superfamily protein | MHK | -0.64 | 0.3 | -0.32 | ||
21 | AT2G42490 | Copper amine oxidase family protein | -0.64 | 0.32 | -0.33 | |||
22 | AT1G61850 | phospholipases;galactolipases | -0.63 | 0.33 | -0.31 | |||
23 | AT1G42480 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3456 (InterPro:IPR021852); Has 177 Blast hits to 177 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.63 | 0.32 | -0.31 | |||
24 | AT4G34310 | alpha/beta-Hydrolases superfamily protein | -0.63 | 0.31 | -0.34 | |||
25 | AT1G31910 | GHMP kinase family protein | -0.63 | 0.32 | -0.32 | |||
26 | AT4G33390 | Plant protein of unknown function (DUF827) | 0.63 | 0.33 | -0.32 | |||
27 | AT2G20110 | Tesmin/TSO1-like CXC domain-containing protein | 0.63 | 0.31 | -0.33 | |||
28 | AT4G28180 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; Has 1508 Blast hits to 1315 proteins in 223 species: Archae - 4; Bacteria - 127; Metazoa - 687; Fungi - 310; Plants - 142; Viruses - 28; Other Eukaryotes - 210 (source: NCBI BLink). |
0.63 | 0.32 | -0.32 | |||
29 | AT5G13280 | aspartate kinase 1 | ASPARTATE KINASE, aspartate kinase 1, ASPARTATE KINASE 1 |
-0.62 | 0.33 | -0.31 | ||
30 | AT1G04500 | CCT motif family protein | -0.62 | 0.29 | -0.3 | |||
31 | AT5G65950 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1683, C-terminal (InterPro:IPR012880), Foie gras liver health family 1 (InterPro:IPR021773); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.62 | 0.34 | -0.3 | |||
32 | AT2G20790 | clathrin adaptor complexes medium subunit family protein | -0.62 | 0.33 | -0.3 | |||
33 | AT1G09230 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.62 | 0.31 | -0.35 | |||
34 | AT5G25520 | SPOC domain / Transcription elongation factor S-II protein | -0.62 | 0.32 | -0.3 | |||
35 | AT1G49560 | Homeodomain-like superfamily protein | 0.62 | 0.3 | -0.32 | |||
36 | AT3G15550 | unknown protein; Has 25732 Blast hits to 16979 proteins in 961 species: Archae - 144; Bacteria - 1801; Metazoa - 12681; Fungi - 1868; Plants - 912; Viruses - 94; Other Eukaryotes - 8232 (source: NCBI BLink). |
0.62 | 0.31 | -0.32 | |||
37 | AT5G16210 | HEAT repeat-containing protein | -0.62 | 0.32 | -0.3 | |||
38 | AT2G07360 | SH3 domain-containing protein | -0.62 | 0.33 | -0.33 | |||
39 | AT1G05070 | Protein of unknown function (DUF1068) | 0.62 | 0.31 | -0.31 | |||
40 | AT2G17660 | RPM1-interacting protein 4 (RIN4) family protein | 0.62 | 0.31 | -0.33 | |||
41 | AT1G61800 | glucose-6-phosphate/phosphate translocator 2 | ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, glucose-6-phosphate/phosphate translocator 2 |
-0.61 | 0.3 | -0.32 | ||
42 | AT4G11730 | Cation transporter/ E1-E2 ATPase family protein | 0.61 | 0.32 | -0.33 | |||
43 | AT5G37420 | Family of unknown function (DUF577) | -0.61 | 0.33 | -0.3 | |||
44 | AT5G47560 | tonoplast dicarboxylate transporter | ATSDAT, TONOPLAST DICARBOXYLATE TRANSPORTER, tonoplast dicarboxylate transporter |
-0.61 | 0.33 | -0.33 | ||
45 | AT1G43900 | Protein phosphatase 2C family protein | -0.61 | 0.3 | -0.3 | |||
46 | AT1G36940 | unknown protein; Has 21 Blast hits to 21 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.3 | -0.31 | |||
47 | AT1G54410 | dehydrin family protein | 0.61 | 0.32 | -0.3 | |||
48 | AT1G33130 | transposable element gene | 0.6 | 0.31 | -0.33 | |||
49 | AT3G55160 | unknown protein; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2428, death-receptor-like (InterPro:IPR019442); Has 357 Blast hits to 330 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). |
-0.6 | 0.33 | -0.31 | |||
50 | AT3G15890 | Protein kinase superfamily protein | 0.6 | 0.3 | -0.31 | |||
51 | AT3G05210 | nucleotide repair protein, putative | ERCC1, UV REPAIR DEFICIENT 7 | -0.6 | 0.33 | -0.33 | ||
52 | AT3G28430 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). |
-0.6 | 0.31 | -0.34 | |||
53 | AT5G57940 | cyclic nucleotide gated channel 5 | cyclic nucleotide gated channel 5, cyclic nucleotide gated channel 5 |
-0.6 | 0.31 | -0.34 | ||
54 | AT1G03280 | Transcription factor TFIIE, alpha subunit | -0.6 | 0.31 | -0.3 | |||
55 | AT2G43970 | RNA-binding protein | -0.6 | 0.33 | -0.32 | |||
56 | AT3G05090 | Transducin/WD40 repeat-like superfamily protein | LATERAL ROOT STIMULATOR 1 | -0.6 | 0.31 | -0.32 | ||
57 | AT2G36010 | E2F transcription factor 3 | ATE2FA, E2F transcription factor 3 | 0.6 | 0.3 | -0.32 | ||
58 | AT2G30590 | WRKY DNA-binding protein 21 | WRKY DNA-binding protein 21 | 0.6 | 0.31 | -0.32 | ||
59 | AT5G37590 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.59 | 0.33 | -0.32 | |||
60 | AT5G11850 | Protein kinase superfamily protein | -0.59 | 0.31 | -0.32 | |||
61 | AT1G35970 | transposable element gene | -0.59 | 0.31 | -0.31 | |||
62 | AT2G23900 | Pectin lyase-like superfamily protein | 0.59 | 0.33 | -0.32 | |||
63 | AT5G43710 | Glycosyl hydrolase family 47 protein | -0.59 | 0.31 | -0.35 | |||
64 | AT5G13380 | Auxin-responsive GH3 family protein | -0.59 | 0.33 | -0.32 | |||
65 | AT4G32640 | Sec23/Sec24 protein transport family protein | -0.59 | 0.31 | -0.31 | |||
66 | AT1G16010 | magnesium transporter 2 | AtMGT2, AtMRS2-1, magnesium transporter 2, MRS2-1 |
-0.59 | 0.31 | -0.32 | ||
67 | AT1G05330 | unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.31 | -0.32 | |||
68 | AT5G56250 | hapless 8 | HAPLESS 8 | -0.59 | 0.32 | -0.34 | ||
69 | AT5G05310 | TLC ATP/ADP transporter | -0.59 | 0.3 | -0.32 | |||
70 | AT3G04530 | phosphoenolpyruvate carboxylase kinase 2 | ATPPCK2, PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2, phosphoenolpyruvate carboxylase kinase 2 |
-0.59 | 0.33 | -0.33 | ||
71 | AT1G25380 | NAD+ transporter 2 | ARABIDOPSIS THALIANA NAD+ TRANSPORTER 2, NAD+ transporter 2 |
-0.59 | 0.31 | -0.31 | ||
72 | AT4G11780 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23020.2); Has 550 Blast hits to 387 proteins in 92 species: Archae - 0; Bacteria - 32; Metazoa - 132; Fungi - 122; Plants - 80; Viruses - 0; Other Eukaryotes - 184 (source: NCBI BLink). |
0.59 | 0.31 | -0.36 | |||
73 | AT3G48770 | DNA binding;ATP binding | -0.59 | 0.32 | -0.32 | |||
74 | AT5G56320 | expansin A14 | ATEXP14, expansin A14, ATHEXP ALPHA 1.5, EXPANSIN 14, expansin A14 |
0.59 | 0.32 | -0.32 | ||
75 | AT2G38100 | proton-dependent oligopeptide transport (POT) family protein |
0.58 | 0.31 | -0.3 | |||
76 | AT3G53090 | ubiquitin-protein ligase 7 | ubiquitin-protein ligase 7 | -0.58 | 0.32 | -0.3 | ||
77 | AT1G16810 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1754, eukaryotic (InterPro:IPR013865); Has 395 Blast hits to 394 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 181; Fungi - 91; Plants - 65; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). |
0.58 | 0.32 | -0.31 | |||
78 | AT3G57860 | UV-B-insensitive 4-like | GIGAS CELL 1, OMISSION OF SECOND DIVISION, UV-B-insensitive 4-like |
0.58 | 0.33 | -0.31 | ||
79 | AT2G47300 | ribonuclease Ps | 0.58 | 0.29 | -0.33 | |||
80 | AT2G30660 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
-0.58 | 0.34 | -0.32 | |||
81 | AT5G62900 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.31 | -0.32 | |||
82 | AT1G75800 | Pathogenesis-related thaumatin superfamily protein | 0.58 | 0.33 | -0.32 | |||
83 | AT3G04420 | NAC domain containing protein 48 | NAC domain containing protein 48, NAC domain containing protein 48 |
-0.58 | 0.3 | -0.32 | ||
84 | AT2G33020 | receptor like protein 24 | receptor like protein 24, receptor like protein 24 |
-0.58 | 0.3 | -0.32 | ||
85 | AT4G23440 | Disease resistance protein (TIR-NBS class) | 0.58 | 0.31 | -0.32 | |||
86 | AT4G39410 | WRKY DNA-binding protein 13 | ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 13, WRKY DNA-binding protein 13 |
0.58 | 0.31 | -0.32 | ||
87 | AT4G00190 | pectin methylesterase 38 | A. THALIANA PECTIN METHYLESTERASE 38, pectin methylesterase 38 |
0.57 | 0.28 | -0.35 | ||
88 | AT5G06100 | myb domain protein 33 | ATMYB33, myb domain protein 33 | -0.57 | 0.32 | -0.31 | ||
89 | AT3G47660 | Regulator of chromosome condensation (RCC1) family protein | 0.57 | 0.31 | -0.3 | |||
90 | AT3G52130 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.57 | 0.3 | -0.33 | |||
91 | AT2G41700 | ATP-binding cassette A1 | ATP-binding cassette A1, Arabidopsis thaliana ATP-binding cassette A1 |
-0.57 | 0.31 | -0.33 | ||
92 | AT4G17420 | Tryptophan RNA-binding attenuator protein-like | -0.57 | 0.31 | -0.33 | |||
93 | AT4G21180 | DnaJ / Sec63 Brl domains-containing protein | ATERDJ2B | -0.57 | 0.33 | -0.31 | ||
94 | AT1G74840 | Homeodomain-like superfamily protein | 0.57 | 0.31 | -0.31 | |||
95 | AT5G30480 | transposable element gene | 0.56 | 0.32 | -0.31 | |||
96 | AT5G20310 | Adenine nucleotide alpha hydrolases-like superfamily protein |
-0.56 | 0.31 | -0.31 | |||
97 | AT2G18640 | geranylgeranyl pyrophosphate synthase 4 | geranylgeranyl pyrophosphate synthase 4 |
0.56 | 0.33 | -0.32 | ||
98 | AT2G20280 | Zinc finger C-x8-C-x5-C-x3-H type family protein | -0.56 | 0.31 | -0.33 | |||
99 | AT2G48150 | glutathione peroxidase 4 | glutathione peroxidase 4, glutathione peroxidase 4 |
0.56 | 0.32 | -0.31 | ||
100 | AT2G27300 | NTM1-like 8 | Arabidopsis NAC domain containing protein 40, NTM1-like 8 |
-0.56 | 0.31 | -0.29 | ||
101 | AT4G36140 | disease resistance protein (TIR-NBS-LRR class), putative | -0.56 | 0.3 | -0.3 | |||
102 | AT4G01090 | Protein of unknown function (DUF3133) | 0.55 | 0.31 | -0.31 | |||
103 | AT3G50120 | Plant protein of unknown function (DUF247) | 0.55 | 0.3 | -0.31 | |||
104 | AT3G48030 | hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein |
0.55 | 0.33 | -0.33 | |||
105 | AT3G25420 | serine carboxypeptidase-like 21 | serine carboxypeptidase-like 21 | 0.55 | 0.29 | -0.32 | ||
106 | AT4G39400 | Leucine-rich receptor-like protein kinase family protein | ATBRI1, BR INSENSITIVE 1, BRASSINOSTEROID INSENSITIVE 1, CABBAGE 2, DWARF 2 |
0.54 | 0.31 | -0.32 | ||
107 | AT3G54250 | GHMP kinase family protein | 0.54 | 0.32 | -0.31 | |||
108 | AT2G01150 | RING-H2 finger protein 2B | RING-H2 finger protein 2B | 0.54 | 0.31 | -0.34 | ||
109 | AT3G04800 | translocase inner membrane subunit 23-3 | translocase inner membrane subunit 23-3, translocase inner membrane subunit 23-3 |
0.54 | 0.32 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
110 | C0096 | Gluconic acid | - | D-Gluconate | - | -0.75 | 0.45 | -0.46 | ||
111 | C0184 | MST_3110.4 | - | - | - | -0.66 | 0.45 | -0.46 | ||
112 | C0197 | Phosphatidylcholine-36:1 | - | Phosphatidylcholine-36:1 | choline biosynthesis III, diacylglycerol biosynthesis, phospholipases, triacylglycerol biosynthesis, linoleate biosynthesis I, phosphatidylcholine biosynthesis III, glutathione redox reactions I |
0.57 | 0.45 | -0.52 |