AT3G16570 : ARABIDOPSIS RAPID ALKALINIZATION FACTOR 23
Query Information
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AGICode AT3G16570
Description rapid alkalinization factor 23
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G16570 rapid alkalinization factor 23 ARABIDOPSIS RAPID ALKALINIZATION
FACTOR 23, rapid alkalinization
factor 23		 1 0.32 -0.32
2 AT5G01750 Protein of unknown function (DUF567) 0.78 0.31 -0.32
3 AT2G32980 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 0.78 0.34 -0.3
4 AT2G42300 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.77 0.3 -0.32
5 AT2G30620 winged-helix DNA-binding transcription factor family
protein		 0.77 0.34 -0.33
6 AT4G18060 SH3 domain-containing protein 0.77 0.32 -0.32
7 AT3G54930 Protein phosphatase 2A regulatory B subunit family protein 0.77 0.3 -0.31
8 AT5G46340 O-acetyltransferase family protein REDUCED WALL ACETYLATION 1 -0.77 0.3 -0.32
9 AT5G61660 glycine-rich protein 0.76 0.31 -0.33
10 AT2G17230 EXORDIUM like 5 EXORDIUM like 5 0.76 0.31 -0.33
11 AT2G22760 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.76 0.33 -0.32
12 AT2G02130 low-molecular-weight cysteine-rich 68 low-molecular-weight cysteine-rich
68, PDF2.3		 0.75 0.3 -0.31
13 AT4G09620 Mitochondrial transcription termination factor family
protein		 0.75 0.31 -0.32
14 AT3G05360 receptor like protein 30 receptor like protein 30, receptor
like protein 30		 -0.75 0.31 -0.33
15 AT1G68765 Putative membrane lipoprotein INFLORESCENCE DEFICIENT IN
ABSCISSION		 -0.75 0.3 -0.32
16 AT3G14270 phosphatidylinositol-4-phosphate 5-kinase family protein FORMS APLOID AND BINUCLEATE CELLS
1B		 -0.74 0.31 -0.31
17 AT5G02540 NAD(P)-binding Rossmann-fold superfamily protein 0.73 0.3 -0.32
18 AT3G59810 Small nuclear ribonucleoprotein family protein 0.73 0.33 -0.3
19 AT3G44780 Cysteine proteinases superfamily protein 0.72 0.3 -0.32
20 AT3G51400 Arabidopsis protein of unknown function (DUF241) 0.72 0.3 -0.3
21 AT4G32330 TPX2 (targeting protein for Xklp2) protein family 0.72 0.34 -0.31
22 AT3G44550 fatty acid reductase 5 fatty acid reductase 5 -0.71 0.31 -0.32
23 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins
in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa -
70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other
Eukaryotes - 33775 (source: NCBI BLink).		 TGN-localized SYP41 interacting
protein		 -0.71 0.32 -0.32
24 AT2G20930 SNARE-like superfamily protein 0.71 0.32 -0.32
25 AT5G13080 WRKY DNA-binding protein 75 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 75, WRKY
DNA-binding protein 75		 -0.71 0.31 -0.31
26 AT5G23550 Got1/Sft2-like vescicle transport protein family 0.71 0.31 -0.31
27 AT5G44210 erf domain protein 9 ERF DOMAIN PROTEIN- 9, ERF DOMAIN
PROTEIN 9, erf domain protein 9		 0.7 0.3 -0.3
28 AT3G52220 CONTAINS InterPro DOMAIN/s: Kinase phosphorylation domain
(InterPro:IPR019315); Has 8882 Blast hits to 4920 proteins
in 346 species: Archae - 10; Bacteria - 184; Metazoa -
3955; Fungi - 1221; Plants - 712; Viruses - 24; Other
Eukaryotes - 2776 (source: NCBI BLink).		 0.7 0.32 -0.32
29 AT2G14260 proline iminopeptidase proline iminopeptidase 0.7 0.31 -0.34
30 AT1G61170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 19 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0;
Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.7 0.35 -0.33
31 AT5G15020 SIN3-like 2 SIN3-like 2 -0.7 0.31 -0.32
32 AT4G08240 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.69 0.32 -0.3
33 AT1G60010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in
18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.69 0.31 -0.32
34 AT5G50170 C2 calcium/lipid-binding and GRAM domain containing protein -0.69 0.3 -0.32
35 AT1G10050 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 -0.69 0.31 -0.31
36 AT1G10430 protein phosphatase 2A-2 protein phosphatase 2A-2 0.69 0.33 -0.31
37 AT2G21970 stress enhanced protein 2 stress enhanced protein 2 0.69 0.32 -0.3
38 AT4G15340 pentacyclic triterpene synthase 1 04C11, pentacyclic triterpene
synthase 1, pentacyclic triterpene
synthase 1		 -0.69 0.34 -0.31
39 AT3G06660 PAPA-1-like family protein / zinc finger (HIT type) family
protein		 0.69 0.3 -0.3
40 AT2G47200 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.69 0.31 -0.32
41 AT4G35930 F-box family protein 0.69 0.32 -0.3
42 AT2G44360 unknown protein; Has 23 Blast hits to 23 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.32 -0.32
43 AT4G00190 pectin methylesterase 38 A. THALIANA PECTIN METHYLESTERASE
38, pectin methylesterase 38		 0.68 0.32 -0.31
44 AT2G44060 Late embryogenesis abundant protein, group 2 0.68 0.31 -0.3
45 AT4G26330 Subtilisin-like serine endopeptidase family protein ATSBT3.18, UNFERTILIZED EMBRYO SAC
17		 0.68 0.33 -0.31
46 AT3G26330 cytochrome P450, family 71, subfamily B, polypeptide 37 cytochrome P450, family 71,
subfamily B, polypeptide 37		 -0.68 0.3 -0.33
47 AT4G20010 plastid transcriptionally active 9 ORGANELLAR SINGLE-STRANDED DNA
BINDING PROTEIN 2, plastid
transcriptionally active 9		 0.68 0.32 -0.31
48 AT1G20120 GDSL-like Lipase/Acylhydrolase superfamily protein -0.68 0.31 -0.32
49 AT2G10400 transposable element gene 0.68 0.33 -0.33
50 AT4G15330 cytochrome P450, family 705, subfamily A, polypeptide 1 cytochrome P450, family 705,
subfamily A, polypeptide 1		 -0.68 0.32 -0.3
51 AT2G30590 WRKY DNA-binding protein 21 WRKY DNA-binding protein 21 0.68 0.33 -0.33
52 AT5G65520 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.33 -0.31
53 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 -0.67 0.32 -0.32
54 AT3G25260 Major facilitator superfamily protein -0.67 0.31 -0.32
55 AT1G77280 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.67 0.32 -0.33
56 AT3G07440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G48530.1); Has 37 Blast hits
to 37 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.67 0.32 -0.33
57 AT1G10200 GATA type zinc finger transcription factor family protein WLIM1 0.67 0.3 -0.3
58 AT5G65240 Leucine-rich repeat protein kinase family protein -0.67 0.32 -0.31
59 AT3G56890 F-box associated ubiquitination effector family protein -0.67 0.28 -0.33
60 AT3G30240 transposable element gene 0.66 0.32 -0.29
61 AT2G24010 serine carboxypeptidase-like 23 serine carboxypeptidase-like 23 0.66 0.35 -0.31
62 AT1G31380 TRAF-like family protein 0.66 0.34 -0.3
63 AT3G66656 AGAMOUS-like 91 AGAMOUS-like 91 0.66 0.31 -0.32
64 AT2G41350 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G21980.1); Has 188 Blast hits
to 188 proteins in 66 species: Archae - 0; Bacteria - 12;
Metazoa - 90; Fungi - 15; Plants - 54; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).		 AtAUG1, augmin 1, EMBRYO DEFECTIVE
2819		 0.66 0.3 -0.3
65 AT1G66220 Subtilase family protein 0.66 0.31 -0.32
66 AT2G24950 Protein of Unknown Function (DUF239) 0.66 0.32 -0.31
67 AT1G24330 ARM repeat superfamily protein -0.66 0.28 -0.3
68 AT2G24970 unknown protein; Has 33 Blast hits to 33 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.66 0.31 -0.31
69 AT3G48490 unknown protein; Has 16 Blast hits to 16 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.66 0.32 -0.32
70 AT5G23210 serine carboxypeptidase-like 34 serine carboxypeptidase-like 34 0.65 0.32 -0.3
71 AT5G11000 Plant protein of unknown function (DUF868) 0.65 0.32 -0.31
72 AT4G15200 formin 3 formin 3, formin 3 0.65 0.33 -0.3
73 AT2G04410 RPM1-interacting protein 4 (RIN4) family protein 0.65 0.31 -0.32
74 AT5G64690 neurofilament triplet H protein-related -0.65 0.3 -0.3
75 AT3G25880 NAD(P)-binding Rossmann-fold superfamily protein 0.65 0.31 -0.34
76 AT4G28940 Phosphorylase superfamily protein -0.65 0.35 -0.32
77 AT5G59720 heat shock protein 18.2 heat shock protein 18.2 0.65 0.31 -0.29
78 AT5G49945 Protein of unknown function (DUF1682) 0.65 0.32 -0.29
79 AT5G59590 UDP-glucosyl transferase 76E2 UDP-glucosyl transferase 76E2 -0.65 0.36 -0.3
80 AT4G24240 WRKY DNA-binding protein 7 ATWRKY7, WRKY DNA-binding protein
7		 0.65 0.33 -0.3
81 AT2G44490 Glycosyl hydrolase superfamily protein BETA GLUCOSIDASE 26, PENETRATION 2 0.65 0.34 -0.3
82 AT2G26390 Serine protease inhibitor (SERPIN) family protein -0.65 0.3 -0.31
83 AT2G36760 UDP-glucosyl transferase 73C2 UDP-glucosyl transferase 73C2 -0.65 0.31 -0.31
84 AT3G06590 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.65 0.3 -0.3
85 AT3G11050 ferritin 2 ferritin 2, ferritin 2 -0.64 0.32 -0.31
86 AT1G42460 transposable element gene -0.64 0.3 -0.33
87 AT2G46750 D-arabinono-1,4-lactone oxidase family protein -0.64 0.34 -0.32
88 AT1G24430 HXXXD-type acyl-transferase family protein -0.64 0.34 -0.3
89 AT5G44350 ethylene-responsive nuclear protein -related -0.63 0.32 -0.32
90 AT1G23560 Domain of unknown function (DUF220) -0.62 0.31 -0.32
91 AT2G02560 cullin-associated and neddylation dissociated CULLIN-ASSOCIATED AND NEDDYLATION
DISSOCIATED 1, cullin-associated
and neddylation dissociated, ETA2,
HEMIVENATA, TIP120		 -0.62 0.31 -0.33
92 AT3G49160 pyruvate kinase family protein -0.62 0.3 -0.32
93 AT1G54540 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.62 0.32 -0.31
94 AT5G45070 phloem protein 2-A8 phloem protein 2-A8, phloem
protein 2-A8		 -0.61 0.33 -0.33
95 AT3G05390 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF248, methyltransferase putative
(InterPro:IPR004159); BEST Arabidopsis thaliana protein
match is: S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein (TAIR:AT4G01240.1);
Has 507 Blast hits to 498 proteins in 33 species: Archae -
4; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 493;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.61 0.33 -0.3
96 AT1G03280 Transcription factor TFIIE, alpha subunit -0.61 0.31 -0.31
97 AT5G52050 MATE efflux family protein -0.61 0.31 -0.32
98 AT5G46910 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 -0.61 0.31 -0.32
99 AT2G30040 mitogen-activated protein kinase kinase kinase 14 mitogen-activated protein kinase
kinase kinase 14		 -0.6 0.32 -0.3
100 AT5G61910 DCD (Development and Cell Death) domain protein -0.6 0.31 -0.31
101 AT1G27595 CONTAINS InterPro DOMAIN/s: Symplekin tight junction
protein C-terminal (InterPro:IPR022075); BEST Arabidopsis
thaliana protein match is: HEAT repeat-containing protein
(TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in
111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi
- 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345
(source: NCBI BLink).		 -0.6 0.33 -0.3
102 AT3G14570 glucan synthase-like 4 glucan synthase-like 4, atgsl4,
gsl04, glucan synthase-like 4		 -0.6 0.34 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
103 C0008 γ-Aminobutyric acid - 4-Aminobutyrate glutamate degradation IV,
4-aminobutyrate degradation IV,
putrescine degradation IV 		-0.67 0.29 -0.32 C0008