AGICode | AT3G22430 |
Description | CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G22430 | CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink). |
1 | 0.31 | -0.32 | |||
2 | AT5G57390 | AINTEGUMENTA-like 5 | AINTEGUMENTA-like 5, CHOTTO 1, EMBRYOMAKER, PLETHORA 5 |
0.78 | 0.31 | -0.3 | ||
3 | AT3G05590 | ribosomal protein L18 | ribosomal protein L18 | -0.76 | 0.3 | -0.31 | ||
4 | AT2G35605 | SWIB/MDM2 domain superfamily protein | -0.75 | 0.3 | -0.32 | |||
5 | AT1G77750 | Ribosomal protein S13/S18 family | -0.75 | 0.32 | -0.32 | |||
6 | AT1G76300 | snRNP core protein SMD3 | snRNP core protein SMD3 | -0.74 | 0.3 | -0.31 | ||
7 | AT2G25490 | EIN3-binding F box protein 1 | EIN3-binding F box protein 1, FBL6 | 0.72 | 0.31 | -0.29 | ||
8 | AT5G22650 | histone deacetylase 2B | ARABIDOPSIS HISTONE DEACETYLASE 2, ATHD2B, HISTONE DEACETYLASE 2, histone deacetylase 2B, HDA4, HDT02, HDT2 |
-0.72 | 0.31 | -0.33 | ||
9 | AT3G59650 | mitochondrial ribosomal protein L51/S25/CI-B8 family protein |
-0.72 | 0.33 | -0.28 | |||
10 | AT2G19750 | Ribosomal protein S30 family protein | -0.71 | 0.3 | -0.32 | |||
11 | AT2G27840 | histone deacetylase-related / HD-related | HISTONE DEACETYLASE 13, HDT04, HDT4 |
-0.71 | 0.31 | -0.31 | ||
12 | AT1G04190 | Tetratricopeptide repeat (TPR)-like superfamily protein | tetratricopeptide repeat 3 | -0.71 | 0.31 | -0.33 | ||
13 | AT2G45710 | Zinc-binding ribosomal protein family protein | -0.7 | 0.31 | -0.3 | |||
14 | AT2G27720 | 60S acidic ribosomal protein family | -0.7 | 0.31 | -0.31 | |||
15 | AT1G14980 | chaperonin 10 | chaperonin 10 | -0.7 | 0.31 | -0.33 | ||
16 | AT1G11240 | CONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921; Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes - 933 (source: NCBI BLink). |
-0.7 | 0.33 | -0.3 | |||
17 | AT5G50810 | translocase inner membrane subunit 8 | translocase inner membrane subunit 8 |
-0.7 | 0.3 | -0.31 | ||
18 | AT5G56940 | Ribosomal protein S16 family protein | -0.69 | 0.32 | -0.31 | |||
19 | AT2G18400 | ribosomal protein L6 family protein | -0.69 | 0.31 | -0.31 | |||
20 | AT1G20580 | Small nuclear ribonucleoprotein family protein | -0.69 | 0.34 | -0.32 | |||
21 | AT2G19740 | Ribosomal protein L31e family protein | -0.69 | 0.32 | -0.29 | |||
22 | AT3G27280 | prohibitin 4 | prohibitin 4, prohibitin 4 | -0.68 | 0.31 | -0.32 | ||
23 | AT5G64090 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.68 | 0.33 | -0.33 | |||
24 | AT2G29540 | RNApolymerase 14 kDa subunit | ATRPAC14, RNApolymerase 14 kDa subunit, RNApolymerase 14 kDa subunit |
-0.68 | 0.32 | -0.32 | ||
25 | AT1G49410 | translocase of the outer mitochondrial membrane 6 | translocase of the outer mitochondrial membrane 6 |
-0.68 | 0.34 | -0.31 | ||
26 | AT3G02820 | zinc knuckle (CCHC-type) family protein | -0.68 | 0.32 | -0.32 | |||
27 | AT5G47700 | 60S acidic ribosomal protein family | -0.68 | 0.31 | -0.31 | |||
28 | AT1G07410 | RAB GTPase homolog A2B | ARABIDOPSIS RAB GTPASE HOMOLOG A2B, RAB GTPase homolog A2B, RAB GTPASE HOMOLOG A2B, RAB GTPase homolog A2B |
-0.68 | 0.32 | -0.33 | ||
29 | AT2G19720 | ribosomal protein S15A B | ribosomal protein S15A B | -0.68 | 0.29 | -0.31 | ||
30 | AT1G07830 | ribosomal protein L29 family protein | -0.67 | 0.34 | -0.33 | |||
31 | AT4G30220 | small nuclear ribonucleoprotein F | small nuclear ribonucleoprotein F | -0.67 | 0.3 | -0.3 | ||
32 | AT1G57620 | emp24/gp25L/p24 family/GOLD family protein | -0.67 | 0.32 | -0.3 | |||
33 | AT5G64650 | Ribosomal protein L17 family protein | -0.67 | 0.32 | -0.31 | |||
34 | AT2G39795 | Mitochondrial glycoprotein family protein | -0.67 | 0.31 | -0.31 | |||
35 | AT3G63180 | TIC-like | TICKLE, TIC-like | 0.67 | 0.31 | -0.31 | ||
36 | AT4G36420 | Ribosomal protein L12 family protein | -0.66 | 0.31 | -0.32 | |||
37 | AT3G56070 | rotamase cyclophilin 2 | rotamase cyclophilin 2 | -0.65 | 0.32 | -0.34 | ||
38 | AT1G16000 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.65 | 0.32 | -0.3 | |||
39 | AT5G52410 | CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.65 | 0.34 | -0.32 | |||
40 | AT5G23290 | prefoldin 5 | prefoldin 5 | -0.65 | 0.29 | -0.31 | ||
41 | AT5G08040 | mitochondrial import receptor subunit TOM5 homolog | mitochondrial import receptor subunit TOM5 homolog |
-0.65 | 0.33 | -0.32 | ||
42 | AT1G73940 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.65 | 0.32 | -0.33 | |||
43 | AT1G26340 | cytochrome B5 isoform A | ARABIDOPSIS CYTOCHROME B5 ISOFORM A, B5 #6, cytochrome B5 isoform A |
-0.65 | 0.32 | -0.31 | ||
44 | AT2G34260 | transducin family protein / WD-40 repeat family protein | human WDR55 (WD40 repeat) homolog | -0.65 | 0.3 | -0.32 | ||
45 | AT4G26180 | Mitochondrial substrate carrier family protein | 0.65 | 0.32 | -0.28 | |||
46 | AT4G30840 | Transducin/WD40 repeat-like superfamily protein | -0.65 | 0.32 | -0.32 | |||
47 | AT1G09910 | Rhamnogalacturonate lyase family protein | 0.65 | 0.34 | -0.31 | |||
48 | AT1G76460 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.64 | 0.32 | -0.32 | |||
49 | AT5G25520 | SPOC domain / Transcription elongation factor S-II protein | 0.64 | 0.3 | -0.3 | |||
50 | AT4G34040 | RING/U-box superfamily protein | 0.64 | 0.33 | -0.32 | |||
51 | AT3G61600 | POZ/BTB containin G-protein 1 | POZ/BTB containin G-protein 1, POZ/BTB containin G-protein 1 |
0.64 | 0.34 | -0.31 | ||
52 | AT2G45910 | U-box domain-containing protein kinase family protein | 0.63 | 0.31 | -0.3 | |||
53 | AT1G15060 | Uncharacterised conserved protein UCP031088, alpha/beta hydrolase |
0.62 | 0.31 | -0.31 | |||
54 | AT5G14540 | Protein of unknown function (DUF1421) | 0.62 | 0.31 | -0.31 | |||
55 | AT3G09850 | D111/G-patch domain-containing protein | 0.62 | 0.34 | -0.32 | |||
56 | AT5G18475 | Pentatricopeptide repeat (PPR) superfamily protein | 0.62 | 0.31 | -0.31 | |||
57 | AT5G04050 | RNA-directed DNA polymerase (reverse transcriptase) | 0.62 | 0.33 | -0.31 | |||
58 | AT2G48110 | reduced epidermal fluorescence 4 | MED33B, REDUCED EPIDERMAL FLUORESCENCE 4 |
0.62 | 0.33 | -0.3 | ||
59 | AT5G66320 | GATA transcription factor 5 | GATA transcription factor 5 | 0.61 | 0.29 | -0.32 | ||
60 | AT1G24190 | SIN3-like 3 | ARABIDOPSIS THALIANA SIN3 HOMOLOG, ARABIDOPSIS THALIANA SIN3 HOMOLOG, SIN3-like 3 |
0.61 | 0.3 | -0.3 | ||
61 | AT1G09510 | NAD(P)-binding Rossmann-fold superfamily protein | 0.6 | 0.33 | -0.33 | |||
62 | AT1G02020 | nitroreductase family protein | 0.59 | 0.31 | -0.3 | |||
63 | AT5G04560 | HhH-GPD base excision DNA repair family protein | DEMETER | 0.59 | 0.32 | -0.3 | ||
64 | AT2G35050 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
0.59 | 0.31 | -0.29 | |||
65 | AT4G18990 | xyloglucan endotransglucosylase/hydrolase 29 | xyloglucan endotransglucosylase/hydrolase 29 |
0.59 | 0.29 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
66 | C0258 | Tryptophan amide (NH3+) | D,L-Tryptophan amide (NH3+) | - | - | 0.73 | 0.45 | -0.47 |