AT3G02400 : -
Query Information
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AGICode AT3G02400
Description SMAD/FHA domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G02400 SMAD/FHA domain-containing protein 1 0.32 -0.33
2 AT1G28060 Pre-mRNA-splicing factor 3 0.73 0.32 -0.32
3 AT1G73710 Pentatricopeptide repeat (PPR) superfamily protein 0.7 0.31 -0.32
4 AT2G12550 ubiquitin-associated (UBA)/TS-N domain-containing protein homolog of human NUB1 0.69 0.3 -0.33
5 AT1G29820 Magnesium transporter CorA-like family protein 0.69 0.31 -0.32
6 AT2G33730 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.69 0.31 -0.3
7 AT5G45370 nodulin MtN21 /EamA-like transporter family protein -0.69 0.32 -0.34
8 AT3G08620 RNA-binding KH domain-containing protein 0.69 0.31 -0.31
9 AT1G32040 transposable element gene 0.67 0.32 -0.31
10 AT2G42760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881); Has 170
Blast hits to 164 proteins in 34 species: Archae - 0;
Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107;
Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).		 -0.67 0.32 -0.32
11 AT3G22670 Pentatricopeptide repeat (PPR) superfamily protein 0.67 0.33 -0.31
12 AT2G28720 Histone superfamily protein 0.67 0.29 -0.28
13 AT3G18380 sequence-specific DNA binding transcription
factors;sequence-specific DNA binding		 SAWADEE homeodomain homolog 2 0.67 0.33 -0.31
14 AT1G18330 Homeodomain-like superfamily protein EARLY-PHYTOCHROME-RESPONSIVE1,
REVEILLE 7		 0.66 0.3 -0.32
15 AT2G29900 Presenilin-2 Presenilin-2 0.66 0.32 -0.32
16 AT2G43980 inositol 1,3,4-trisphosphate 5/6-kinase 4 inositol 1,3,4-trisphosphate
5/6-kinase 4, inositol
1,3,4-trisphosphate 5/6-kinase 4		 -0.66 0.33 -0.33
17 AT5G56240 BEST Arabidopsis thaliana protein match is: hapless 8
(TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 0.65 0.32 -0.3
18 AT2G40650 PRP38 family protein 0.65 0.32 -0.3
19 AT5G02190 Eukaryotic aspartyl protease family protein ARABIDOPSIS THALIANA ASPARTIC
PROTEASE 38, EMBRYO DEFECTIVE 24,
PROMOTION OF CELL SURVIVAL 1		 0.65 0.31 -0.32
20 AT3G18850 lysophosphatidyl acyltransferase 5 lysophosphatidyl acyltransferase 5 0.65 0.3 -0.32
21 AT5G26230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 membrane-associated kinase
regulator 1		 0.65 0.34 -0.33
22 AT2G45660 AGAMOUS-like 20 AGAMOUS-like 20, SUPPRESSOR OF
OVEREXPRESSION OF CO 1, SUPPRESSOR
OF OVEREXPRESSION OF CO 1		 0.65 0.32 -0.34
23 AT1G05710 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.65 0.33 -0.31
24 AT2G32590 LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits
to 447 proteins in 202 species: Archae - 0; Bacteria - 4;
Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other
Eukaryotes - 108 (source: NCBI BLink).		 EMBRYO DEFECTIVE 2795 0.65 0.33 -0.31
25 AT5G12440 CCCH-type zinc fingerfamily protein with RNA-binding domain 0.65 0.31 -0.3
26 AT2G28380 dsRNA-binding protein 2 dsRNA-binding protein 2 0.65 0.31 -0.3
27 AT5G11150 vesicle-associated membrane protein 713 vesicle-associated membrane
protein 713, VAMP713,
vesicle-associated membrane
protein 713		 0.65 0.31 -0.33
28 AT4G17370 Oxidoreductase family protein -0.64 0.29 -0.31
29 AT3G60910 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.64 0.32 -0.32
30 AT5G41260 Protein kinase protein with tetratricopeptide repeat domain 0.64 0.31 -0.33
31 AT4G16442 Uncharacterised protein family (UPF0497) 0.64 0.29 -0.32
32 AT1G24390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.31 -0.32
33 AT5G43440 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.63 0.3 -0.32
34 AT2G01300 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits
to 73 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.33 -0.32
35 AT5G53360 TRAF-like superfamily protein -0.63 0.31 -0.29
36 AT4G37580 Acyl-CoA N-acyltransferases (NAT) superfamily protein CONSTITUTIVE PHOTOMORPHOGENIC 3,
HOOKLESS 1, UNUSUAL SUGAR RESPONSE
2		 0.63 0.31 -0.31
37 AT2G22080 unknown protein; Has 96314 Blast hits to 34847 proteins in
1702 species: Archae - 612; Bacteria - 27969; Metazoa -
24311; Fungi - 12153; Plants - 4409; Viruses - 1572; Other
Eukaryotes - 25288 (source: NCBI BLink).		 0.63 0.31 -0.3
38 AT5G44280 RING 1A ARABIDOPSIS THALIANA RING 1A, RING
1A		 0.63 0.32 -0.33
39 AT1G48120 hydrolases;protein serine/threonine phosphatases 0.63 0.33 -0.29
40 AT2G42520 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.31 -0.31
41 AT5G15010 Tetratricopeptide repeat (TPR)-like superfamily protein 0.62 0.31 -0.3
42 AT4G04320 malonyl-CoA decarboxylase family protein -0.62 0.32 -0.33
43 AT4G40010 SNF1-related protein kinase 2.7 SUCROSE NONFERMENTING 1-RELATED
PROTEIN KINASE 2-7, SNF1-related
protein kinase 2.7, SRK2F		 0.62 0.32 -0.34
44 AT5G19010 mitogen-activated protein kinase 16 mitogen-activated protein kinase
16		 0.62 0.3 -0.3
45 AT1G22810 Integrase-type DNA-binding superfamily protein -0.62 0.31 -0.31
46 AT4G37470 alpha/beta-Hydrolases superfamily protein 0.62 0.31 -0.32
47 AT5G58780 Undecaprenyl pyrophosphate synthetase family protein 0.62 0.33 -0.33
48 AT5G10790 ubiquitin-specific protease 22 ubiquitin-specific protease 22 0.62 0.34 -0.28
49 AT1G32920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to wounding; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G32928.1); Has 42 Blast
hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.32 -0.3
50 AT3G43680 transposable element gene 0.62 0.32 -0.33
51 AT4G00190 pectin methylesterase 38 A. THALIANA PECTIN METHYLESTERASE
38, pectin methylesterase 38		 0.61 0.31 -0.32
52 AT1G26900 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.34 -0.31
53 AT4G35650 isocitrate dehydrogenase III isocitrate dehydrogenase III -0.61 0.3 -0.32
54 AT1G77850 auxin response factor 17 auxin response factor 17 0.61 0.32 -0.32
55 AT5G40410 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.33 -0.32
56 AT4G16650 O-fucosyltransferase family protein 0.61 0.3 -0.31
57 AT2G45160 GRAS family transcription factor ARABIDOPSIS THALIANA HAIRY
MERISTEM 1, HAIRY MERISTEM 1, LOST
MERISTEMS 1		 0.61 0.28 -0.31
58 AT1G54410 dehydrin family protein 0.61 0.32 -0.33
59 AT1G05490 chromatin remodeling 31 chromatin remodeling 31 0.61 0.31 -0.32
60 AT1G25320 Leucine-rich repeat protein kinase family protein 0.61 0.32 -0.33
61 AT4G31880 LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: Tudor/PWWP/MBT
superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast
hits to 70781 proteins in 2973 species: Archae - 289;
Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants -
6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI
BLink).		 0.61 0.31 -0.29
62 AT2G39280 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.6 0.33 -0.33
63 AT2G15240 UNC-50 family protein -0.6 0.31 -0.31
64 AT3G45600 tetraspanin3 tetraspanin3 0.6 0.29 -0.31
65 AT3G25210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.6 0.3 -0.34
66 AT1G02340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 FBI1, LONG HYPOCOTYL IN FAR-RED,
REDUCED PHYTOCHROME SIGNALING 1,
REDUCED SENSITIVITY TO FAR-RED
LIGHT 1		 0.6 0.33 -0.32
67 AT1G57906 unknown protein; BEST Arabidopsis thaliana protein match
is: F-box family protein with a domain of unknown function
(DUF295) (TAIR:AT2G17690.1); Has 57 Blast hits to 57
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.6 0.32 -0.33
68 AT4G24680 modifier of snc1 MODIFIER OF snc1 0.6 0.31 -0.32
69 AT3G52360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G35850.1); Has 34 Blast
hits to 34 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.31 -0.28
70 AT3G50690 Leucine-rich repeat (LRR) family protein 0.59 0.32 -0.32
71 AT3G05850 transposable element gene 0.59 0.32 -0.32
72 AT1G75420 UDP-Glycosyltransferase superfamily protein 0.59 0.32 -0.33
73 AT1G48560 unknown protein; Has 75 Blast hits to 71 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 69; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.59 0.34 -0.31
74 AT5G60910 AGAMOUS-like 8 AGAMOUS-like 8, FRUITFULL 0.59 0.33 -0.32
75 AT1G08630 threonine aldolase 1 threonine aldolase 1 0.59 0.3 -0.31
76 AT2G41120 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF309
(InterPro:IPR005500); Has 349 Blast hits to 349 proteins in
112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi
- 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127
(source: NCBI BLink).		 -0.58 0.33 -0.34
77 AT5G07730 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G61360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.58 0.34 -0.31
78 AT2G19400 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 -0.58 0.31 -0.34
79 AT1G77660 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.58 0.3 -0.32
80 AT5G19150 pfkB-like carbohydrate kinase family protein -0.57 0.33 -0.3
81 AT4G27930 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.34 -0.31
82 AT5G04330 Cytochrome P450 superfamily protein -0.57 0.3 -0.32
83 AT2G29250 Concanavalin A-like lectin protein kinase family protein -0.56 0.32 -0.31
84 AT5G14970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits
to 397 proteins in 95 species: Archae - 0; Bacteria - 294;
Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other
Eukaryotes - 199 (source: NCBI BLink).		 -0.56 0.32 -0.34
85 AT1G33330 Class I peptide chain release factor -0.55 0.3 -0.33
86 AT5G51170 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0406
(InterPro:IPR019146); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.55 0.31 -0.33
87 AT4G19670 RING/U-box superfamily protein -0.55 0.32 -0.31
88 AT1G34240 transposable element gene -0.55 0.34 -0.31
89 AT1G19580 gamma carbonic anhydrase 1 gamma carbonic anhydrase 1 -0.55 0.3 -0.33
90 AT4G38240 alpha-1,3-mannosyl-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase, putative		 COMPLEX GLYCAN LESS, COMPLEX
GLYCAN LESS 1,
N-ACETYLGLUCOSAMINYLTRANSFERASE I		 -0.54 0.31 -0.33
91 AT2G06010 OBP3-responsive gene 4 OBP3-responsive gene 4 -0.54 0.31 -0.33
92 AT1G63290 Aldolase-type TIM barrel family protein -0.54 0.32 -0.31
93 AT3G09960 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.53 0.32 -0.3
94 AT4G22940 Protein kinase superfamily protein -0.53 0.3 -0.31
95 AT3G44700 Plant protein of unknown function -0.53 0.28 -0.31
96 AT1G17390 transposable element gene -0.53 0.31 -0.32
97 AT2G22160 Cysteine proteinases superfamily protein -0.53 0.31 -0.31
98 AT4G11410 NAD(P)-binding Rossmann-fold superfamily protein -0.53 0.34 -0.32
99 AT4G15250 B-box type zinc finger protein with CCT domain -0.53 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
100 C0199 Phosphatidylethanolamine-36:6 - Phosphatidylethanolamine-36:6 phospholipid biosynthesis II,
linoleate biosynthesis I,
phosphatidylethanolamine biosynthesis I,
phosphatidylethanolamine biosynthesis II,
glutathione redox reactions I 		0.72 0.49 -0.51 C0199
101 C0230 Rutin - - polyphenol biosynthesis 0.62 0.44 -0.44