AT3G02560 : -
Query Information
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AGICode AT3G02560
Description Ribosomal protein S7e family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G02560 Ribosomal protein S7e family protein 1 0.32 -0.32
2 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.91 0.32 -0.29
3 AT1G73230 Nascent polypeptide-associated complex NAC 0.9 0.28 -0.3
4 AT5G19510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.9 0.34 -0.3
5 AT5G47700 60S acidic ribosomal protein family 0.89 0.36 -0.31
6 AT4G15000 Ribosomal L27e protein family 0.89 0.31 -0.3
7 AT3G51010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.89 0.33 -0.3
8 AT4G33250 eukaryotic translation initiation factor 3K ATTIF3K1, eukaryotic translation
initiation factor 3K, TIF3K1		 0.89 0.33 -0.32
9 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.89 0.32 -0.32
10 AT4G34670 Ribosomal protein S3Ae 0.88 0.31 -0.33
11 AT3G53020 Ribosomal protein L24e family protein RIBOSOMAL PROTEIN L24, RPL24B,
SHORT VALVE1		 0.88 0.32 -0.31
12 AT3G02080 Ribosomal protein S19e family protein 0.88 0.32 -0.31
13 AT2G36620 ribosomal protein L24 ribosomal protein L24 0.88 0.3 -0.31
14 AT4G00100 ribosomal protein S13A ribosomal protein S13A, POINTED
FIRST LEAF 2, RPS13, ribosomal
protein S13A		 0.88 0.31 -0.32
15 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 0.88 0.31 -0.32
16 AT5G27850 Ribosomal protein L18e/L15 superfamily protein 0.87 0.3 -0.32
17 AT3G05560 Ribosomal L22e protein family 0.87 0.34 -0.33
18 AT1G67430 Ribosomal protein L22p/L17e family protein 0.87 0.32 -0.28
19 AT1G18080 Transducin/WD40 repeat-like superfamily protein ATARCA, RACK1A, RECEPTOR FOR
ACTIVATED C KINASE 1 A		 0.87 0.3 -0.31
20 AT4G09800 S18 ribosomal protein S18 ribosomal protein 0.87 0.33 -0.33
21 AT3G61110 ribosomal protein S27 ribosomal protein S27, ribosomal
protein S27		 0.87 0.31 -0.3
22 AT1G48830 Ribosomal protein S7e family protein 0.87 0.31 -0.32
23 AT3G04840 Ribosomal protein S3Ae 0.87 0.33 -0.31
24 AT5G27470 seryl-tRNA synthetase / serine--tRNA ligase 0.87 0.32 -0.29
25 AT4G16720 Ribosomal protein L23/L15e family protein 0.86 0.33 -0.33
26 AT2G27710 60S acidic ribosomal protein family 0.86 0.32 -0.3
27 AT1G04480 Ribosomal protein L14p/L23e family protein 0.86 0.31 -0.33
28 AT2G36170 Ubiquitin supergroup;Ribosomal protein L40e 0.86 0.31 -0.31
29 AT2G36160 Ribosomal protein S11 family protein 0.86 0.33 -0.29
30 AT4G31700 ribosomal protein S6 ribosomal protein S6, RPS6A 0.86 0.34 -0.31
31 AT3G56340 Ribosomal protein S26e family protein 0.86 0.34 -0.33
32 AT4G10480 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.86 0.32 -0.35
33 AT2G20450 Ribosomal protein L14 0.86 0.31 -0.3
34 AT3G09500 Ribosomal L29 family protein 0.86 0.33 -0.32
35 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.86 0.32 -0.35
36 AT1G54690 gamma histone variant H2AX GAMMA H2AX, gamma histone variant
H2AX, H2AXB, histone H2A 3		 0.86 0.34 -0.32
37 AT3G10610 Ribosomal S17 family protein 0.86 0.33 -0.34
38 AT3G09200 Ribosomal protein L10 family protein 0.86 0.31 -0.31
39 AT2G19730 Ribosomal L28e protein family 0.86 0.32 -0.31
40 AT2G19740 Ribosomal protein L31e family protein 0.86 0.33 -0.31
41 AT2G44120 Ribosomal protein L30/L7 family protein 0.85 0.29 -0.33
42 AT4G34555 Ribosomal protein S25 family protein 0.85 0.33 -0.3
43 AT5G27770 Ribosomal L22e protein family 0.85 0.3 -0.33
44 AT2G45730 eukaryotic initiation factor 3 gamma subunit family protein 0.85 0.29 -0.32
45 AT1G22780 Ribosomal protein S13/S18 family POINTED FIRST LEAVES, POINTED
FIRST LEAVES 1, 40S RIBOSOMAL
PROTEIN S18		 0.85 0.32 -0.32
46 AT5G06360 Ribosomal protein S8e family protein 0.85 0.3 -0.3
47 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 0.85 0.3 -0.31
48 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 0.85 0.31 -0.33
49 AT4G30220 small nuclear ribonucleoprotein F small nuclear ribonucleoprotein F 0.84 0.32 -0.31
50 AT2G27720 60S acidic ribosomal protein family 0.84 0.31 -0.3
51 AT5G61840 Exostosin family protein GUT1 0.84 0.31 -0.31
52 AT5G23900 Ribosomal protein L13e family protein 0.84 0.29 -0.33
53 AT2G25210 Ribosomal protein L39 family protein 0.84 0.32 -0.3
54 AT5G16070 TCP-1/cpn60 chaperonin family protein 0.84 0.32 -0.32
55 AT1G22930 T-complex protein 11 -0.84 0.31 -0.31
56 AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.84 0.29 -0.33
57 AT1G28395 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast
hits to 89 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.84 0.31 -0.32
58 AT5G03850 Nucleic acid-binding, OB-fold-like protein 0.84 0.34 -0.36
59 AT3G55280 ribosomal protein L23AB RIBOSOMAL PROTEIN L23A2, ribosomal
protein L23AB		 0.84 0.33 -0.33
60 AT1G04170 eukaryotic translation initiation factor 2 gamma subunit eukaryotic translation initiation
factor 2 gamma subunit		 0.84 0.3 -0.31
61 AT1G69620 ribosomal protein L34 ribosomal protein L34 0.83 0.32 -0.32
62 AT3G11510 Ribosomal protein S11 family protein 0.83 0.31 -0.32
63 AT5G20920 eukaryotic translation initiation factor 2 beta subunit eukaryotic translation initiation
factor 2 beta subunit, embryo
defective 1401		 0.83 0.31 -0.3
64 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 0.83 0.34 -0.32
65 AT1G01100 60S acidic ribosomal protein family 0.83 0.3 -0.31
66 AT2G41840 Ribosomal protein S5 family protein 0.83 0.32 -0.32
67 AT4G10450 Ribosomal protein L6 family 0.83 0.31 -0.32
68 AT3G11250 Ribosomal protein L10 family protein 0.83 0.31 -0.3
69 AT5G44340 tubulin beta chain 4 tubulin beta chain 4 0.83 0.29 -0.31
70 AT1G49600 RNA-binding protein 47A RNA-binding protein 47A,
RNA-binding protein 47A		 0.83 0.3 -0.3
71 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.83 0.31 -0.32
72 AT5G20890 TCP-1/cpn60 chaperonin family protein 0.83 0.31 -0.3
73 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 0.83 0.33 -0.32
74 AT3G53890 Ribosomal protein S21e 0.82 0.32 -0.33
75 AT5G23140 nuclear-encoded CLP protease P7 CLPP2, nuclear-encoded CLP
protease P7		 0.82 0.31 -0.32
76 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.82 0.32 -0.32
77 AT5G35530 Ribosomal protein S3 family protein 0.82 0.31 -0.32
78 AT2G46230 PIN domain-like family protein 0.82 0.32 -0.31
79 AT1G24510 TCP-1/cpn60 chaperonin family protein 0.82 0.3 -0.29
80 AT1G44835 YbaK/aminoacyl-tRNA synthetase-associated domain 0.82 0.31 -0.31
81 AT5G23740 ribosomal protein S11-beta ribosomal protein S11-beta 0.82 0.31 -0.33
82 AT1G29400 MEI2-like protein 5 MEI2-like protein 5, MEI2-like
protein 5		 -0.82 0.31 -0.31
83 AT3G03960 TCP-1/cpn60 chaperonin family protein 0.82 0.3 -0.32
84 AT5G11160 adenine phosphoribosyltransferase 5 adenine phosphoribosyltransferase
5		 0.82 0.32 -0.3
85 AT5G23290 prefoldin 5 prefoldin 5 0.81 0.3 -0.31
86 AT1G72770 homology to ABI1 HYPERSENSITIVE TO ABA1 -0.81 0.32 -0.32
87 AT1G32740 SBP (S-ribonuclease binding protein) family protein -0.81 0.33 -0.3
88 AT3G18190 TCP-1/cpn60 chaperonin family protein 0.81 0.31 -0.32
89 AT1G09630 RAB GTPase 11C ARABIDOPSIS RAB GTPASE A2A, RAB
GTPase 11C, ARABIDOPSIS RAB GTPASE
A2A, RAB GTPASE A2A, RAB GTPase
11C		 0.81 0.34 -0.31
90 AT3G13920 eukaryotic translation initiation factor 4A1 eukaryotic translation initiation
factor 4A1, RH4, TIF4A1		 0.81 0.32 -0.31
91 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10		 0.81 0.32 -0.3
92 AT2G39990 eukaryotic translation initiation factor 2 Arabidopsis thaliana eukaryotic
translation initiation factor 3
subunit F, eukaryotic translation
initiation factor 2, eukaryotic
translation initiation factor 3
subunit F		 0.81 0.32 -0.32
93 AT2G39900 GATA type zinc finger transcription factor family protein WLIM2a 0.81 0.31 -0.32
94 AT4G36210 Protein of unknown function (DUF726) -0.8 0.3 -0.3
95 AT3G02050 K+ uptake transporter 3 ARABIDOPSIS THALIANA POTASSIUM
TRANSPORTER 4, ATKUP3, K+ uptake
transporter 3		 -0.79 0.31 -0.32
96 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 -0.79 0.31 -0.31
97 AT3G26380 Melibiase family protein -0.79 0.33 -0.29
98 AT3G61960 Protein kinase superfamily protein -0.79 0.31 -0.31
99 AT1G17550 homology to ABI2 homology to ABI2 -0.78 0.32 -0.31
100 AT5G59220 highly ABA-induced PP2C gene 1 highly ABA-induced PP2C gene 1,
senescence associated gene 113		 -0.78 0.34 -0.33
101 AT3G08860 PYRIMIDINE 4 PYRIMIDINE 4 -0.77 0.32 -0.32
102 AT3G16940 calmodulin binding;transcription regulators -0.76 0.33 -0.33
103 AT2G35060 K+ uptake permease 11 K+ uptake permease 11 -0.76 0.32 -0.33
104 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 -0.76 0.32 -0.33
105 AT3G44880 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ACCELERATED CELL DEATH 1, LETHAL
LEAF-SPOT 1 HOMOLOG, PHEOPHORBIDE
A OXYGENASE		 -0.76 0.3 -0.29
106 AT1G24070 cellulose synthase-like A10 cellulose synthase-like A10,
CELLULOSE SYNTHASE LIKE A10,
cellulose synthase-like A10		 -0.76 0.31 -0.34
107 AT3G46450 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.76 0.31 -0.33
108 AT2G46680 homeobox 7 homeobox 7, ARABIDOPSIS THALIANA
HOMEOBOX 7, homeobox 7		 -0.76 0.34 -0.31
109 AT2G35680 Phosphotyrosine protein phosphatases superfamily protein -0.76 0.3 -0.29
110 AT3G11420 Protein of unknown function (DUF604) -0.76 0.32 -0.31
111 AT1G31480 shoot gravitropism 2 (SGR2) SHOOT GRAVITROPISM 2 -0.75 0.31 -0.34
112 AT3G24740 Protein of unknown function (DUF1644) -0.75 0.31 -0.31
113 AT1G22370 UDP-glucosyl transferase 85A5 UDP-glucosyl transferase 85A5,
UDP-glucosyl transferase 85A5		 -0.75 0.32 -0.32
114 AT2G30550 alpha/beta-Hydrolases superfamily protein -0.75 0.32 -0.29
115 AT4G33700 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.75 0.33 -0.32
116 AT3G08870 Concanavalin A-like lectin protein kinase family protein -0.74 0.32 -0.32
117 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase		 -0.73 0.31 -0.31
118 AT1G18710 myb domain protein 47 myb domain protein 47, myb domain
protein 47		 -0.73 0.32 -0.3
119 AT1G65660 Pre-mRNA splicing Prp18-interacting factor SWELLMAP 1 -0.73 0.31 -0.29
120 AT1G19650 Sec14p-like phosphatidylinositol transfer family protein -0.72 0.32 -0.33
121 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.31 -0.31
122 AT5G54730 homolog of yeast autophagy 18 (ATG18) F ARABIDOPSIS THALIANA HOMOLOG OF
YEAST AUTOPHAGY 18 (ATG18) F,
homolog of yeast autophagy 18
(ATG18) F, homolog of yeast
autophagy 18 (ATG18) F		 -0.72 0.32 -0.34
123 AT3G25740 methionine aminopeptidase 1C methionine aminopeptidase 1C,
METHIONINE AMINOPEPTIDASE 1C		 -0.71 0.33 -0.3
124 AT3G15790 methyl-CPG-binding domain 11 ATMBD11, methyl-CPG-binding domain
11		 -0.71 0.32 -0.32
125 AT5G64900 precursor of peptide 1 ARABIDOPSIS THALIANA PEPTIDE 1,
PEPTIDE 1, precursor of peptide 1		 -0.7 0.32 -0.3
126 AT1G17830 Protein of unknown function (DUF789) -0.7 0.32 -0.34
127 AT5G02620 ankyrin-like1 ankyrin-like1, ATANK1 -0.7 0.32 -0.32
128 AT5G45350 proline-rich family protein -0.69 0.3 -0.32
129 AT1G73040 Mannose-binding lectin superfamily protein -0.69 0.31 -0.29
130 AT5G50170 C2 calcium/lipid-binding and GRAM domain containing protein -0.69 0.3 -0.33
131 AT1G52000 Mannose-binding lectin superfamily protein -0.69 0.28 -0.35
132 AT1G02310 Glycosyl hydrolase superfamily protein endo-beta-mannanase 1 -0.69 0.32 -0.31
133 AT3G21750 UDP-glucosyl transferase 71B1 UDP-glucosyl transferase 71B1 -0.69 0.34 -0.31
134 AT2G43530 Scorpion toxin-like knottin superfamily protein -0.68 0.32 -0.33
135 AT2G14520 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.68 0.32 -0.3
136 AT1G56650 production of anthocyanin pigment 1 MYB DOMAIN PROTEIN 75,
MYELOBLASTOSIS PROTEIN 75,
production of anthocyanin pigment
1, SUC-INDUCED ANTHOCYANIN
ACCUMULATION 1		 -0.68 0.31 -0.3
137 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 -0.68 0.33 -0.31
138 AT1G36370 serine hydroxymethyltransferase 7 serine hydroxymethyltransferase 7 -0.68 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
139 C0217 Putative glucosinole - - - 0.85 0.44 -0.43
140 C0193 Pantothenic acid D,L-Pantothenic acid Pantothenate pantothenate biosynthesis -0.8 0.46 -0.45 C0193
141 C0184 MST_3110.4 - - - -0.75 0.46 -0.45
142 C0029 3-Indolylacetonitrile - Indole-3-acetonitrile indole glucosinolate breakdown (insect chewing induced),
IAA biosynthesis I,
camalexin biosynthesis 		-0.74 0.29 -0.31 C0029