AT3G02540 : PUTATIVE DNA REPAIR PROTEIN RAD23-3
Query Information
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AGICode AT3G02540
Description Rad23 UV excision repair protein family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G02540 Rad23 UV excision repair protein family PUTATIVE DNA REPAIR PROTEIN
RAD23-3, RADIATION SENSITIVE23C		 1 0.31 -0.31
2 AT4G22490 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.73 0.32 -0.32
3 AT2G38860 Class I glutamine amidotransferase-like superfamily protein YLS5 -0.72 0.31 -0.31
4 AT1G18620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74160.1); Has 1987 Blast hits
to 1263 proteins in 207 species: Archae - 0; Bacteria -
172; Metazoa - 665; Fungi - 149; Plants - 271; Viruses - 6;
Other Eukaryotes - 724 (source: NCBI BLink).		 0.72 0.31 -0.31
5 AT3G23310 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 0.71 0.31 -0.32
6 AT2G30150 UDP-Glycosyltransferase superfamily protein 0.7 0.31 -0.3
7 AT5G23940 HXXXD-type acyl-transferase family protein DEFECTIVE IN CUTICULAR RIDGES,
EMBRYO DEFECTIVE 3009, PERMEABLE
LEAVES3		 0.7 0.3 -0.35
8 AT1G06060 LisH and RanBPM domains containing protein 0.69 0.31 -0.32
9 AT2G07050 cycloartenol synthase 1 cycloartenol synthase 1 0.69 0.31 -0.29
10 AT2G20230 Tetraspanin family protein 0.67 0.31 -0.31
11 AT5G55560 Protein kinase superfamily protein -0.67 0.3 -0.31
12 AT1G53690 DNA directed RNA polymerase, 7 kDa subunit 0.67 0.32 -0.34
13 AT3G52710 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G36220.1); Has 64 Blast
hits to 64 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.31 -0.31
14 AT1G03000 peroxin 6 peroxin 6 0.65 0.34 -0.32
15 AT2G37590 DNA binding with one finger 2.4 ATDOF2.4, DNA binding with one
finger 2.4		 0.64 0.33 -0.3
16 AT2G28890 poltergeist like 4 poltergeist like 4 -0.64 0.32 -0.34
17 AT1G80830 natural resistance-associated macrophage protein 1 ATNRAMP1, natural
resistance-associated macrophage
protein 1, PMIT1		 -0.63 0.33 -0.3
18 AT4G32650 potassium channel in Arabidopsis thaliana 3 ARABIDOPSIS THALIANA K+ RECTIFYING
CHANNEL 1, A. thaliana
low-K+-tolerant 1, potassium
channel in Arabidopsis thaliana 3,
KC1		 -0.63 0.33 -0.31
19 AT5G62100 BCL-2-associated athanogene 2 BCL-2-associated athanogene 2,
BCL-2-associated athanogene 2		 0.63 0.33 -0.34
20 AT1G48050 Ku80 family protein ARABIDOPSIS THALIANA KU80 HOMOLOG,
KU80		 0.62 0.3 -0.33
21 AT1G06240 Protein of unknown function DUF455 0.62 0.3 -0.32
22 AT5G54680 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 105,
iaa-leucine resistant3		 0.62 0.31 -0.3
23 AT2G13690 PRLI-interacting factor, putative 0.61 0.3 -0.33
24 AT1G62790 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.61 0.3 -0.32
25 AT5G09800 ARM repeat superfamily protein -0.6 0.33 -0.31
26 AT5G03440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G54880.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.6 0.31 -0.31
27 ATCG00520 unfolded protein binding YCF4 0.6 0.3 -0.31
28 AT3G47640 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 POPEYE 0.6 0.32 -0.3
29 AT1G76930 extensin 4 EXTENSIN 1, extensin 4, extensin
1, extensin 4, OBP3-RESPONSIVE
GENE 5		 -0.6 0.3 -0.31
30 AT1G16970 KU70 homolog ARABIDOPSIS THALIANA KU70 HOMOLOG,
KU70 homolog		 -0.59 0.32 -0.31
31 AT1G21310 extensin 3 extensin 3, extensin 3,
ROOT-SHOOT-HYPOCOTYL DEFECTIVE		 -0.59 0.32 -0.32
32 AT1G28710 Nucleotide-diphospho-sugar transferase family protein 0.59 0.31 -0.31
33 AT3G06960 pigment defective 320 PIGMENT DEFECTIVE 320,
TRIGALACTOSYLDIACYLGLYCEROL 4		 0.59 0.3 -0.32
34 AT5G47390 myb-like transcription factor family protein 0.59 0.31 -0.33
35 AT3G09405 Pectinacetylesterase family protein -0.58 0.35 -0.31
36 AT3G25640 Protein of unknown function, DUF617 -0.58 0.31 -0.32
37 AT1G70140 formin 8 formin 8, formin 8 -0.57 0.3 -0.31
38 AT5G51930 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 -0.57 0.33 -0.34
39 AT4G35700 zinc finger (C2H2 type) family protein DUO1-activated zinc finger 3 -0.56 0.32 -0.34
40 AT5G19280 kinase associated protein phosphatase kinase associated protein
phosphatase, ROOT ATTENUATED
GROWTH 1		 -0.56 0.29 -0.34
41 AT1G51890 Leucine-rich repeat protein kinase family protein -0.56 0.32 -0.33
42 AT4G01440 nodulin MtN21 /EamA-like transporter family protein -0.56 0.35 -0.3
43 AT5G55050 GDSL-like Lipase/Acylhydrolase superfamily protein -0.56 0.31 -0.33
44 AT1G51660 mitogen-activated protein kinase kinase 4 ARABIDOPSIS THALIANA
MITOGEN-ACTIVATED PROTEIN KINASE
KINASE 4, ARABIDOPSIS THALIANA
MITOGEN-ACTIVATED PROTEIN KINASE
KINASE 4, mitogen-activated
protein kinase kinase 4		 -0.55 0.3 -0.32
45 AT1G66480 plastid movement impaired 2 -0.54 0.31 -0.32
46 AT1G16420 metacaspase 8 ARABIDOPSIS THALIANA METACASPASE
8, metacaspase 2e, metacaspase 8,
metacaspase 2e		 -0.54 0.33 -0.33
47 AT3G22930 calmodulin-like 11 calmodulin-like 11 -0.51 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
48 C0227 Ribose D-Ribose D-Ribose ribose degradation,
guanosine nucleotides degradation I,
pyrimidine salvage pathway,
pyridine nucleotide cycling (plants),
adenine and adenosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage II,
cis-zeatin biosynthesis,
adenosine nucleotides degradation I,
pyrimidine ribonucleosides degradation II 		-0.83 0.43 -0.45 C0227
49 C0239 Spermidine - Spermidine spermine biosynthesis,
spermine and spermidine degradation III,
beta-alanine biosynthesis I,
hypusine biosynthesis,
spermidine hydroxycinnamic acid conjugates biosynthesis,
spermidine biosynthesis I 		-0.71 0.46 -0.45 C0239