AT3G02500 : -
Query Information
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AGICode AT3G02500
Description unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits to 49 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G02500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits
to 49 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 1 0.32 -0.32
2 AT3G18940 clast3-related -0.73 0.32 -0.32
3 AT5G48070 xyloglucan endotransglucosylase/hydrolase 20 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 20,
xyloglucan
endotransglucosylase/hydrolase 20		 -0.73 0.3 -0.31
4 AT5G02270 non-intrinsic ABC protein 9 ATP-binding cassette I20,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 9, non-intrinsic ABC
protein 9		 -0.72 0.33 -0.32
5 AT1G72730 DEA(D/H)-box RNA helicase family protein -0.72 0.31 -0.34
6 AT1G15480 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.31 -0.33
7 AT1G50950 Thioredoxin protein with domain of unknown function
(DUF1692)		 0.71 0.31 -0.33
8 AT5G25220 KNOTTED1-like homeobox gene 3 KNOTTED1-like homeobox gene 3 0.7 0.32 -0.3
9 AT5G12410 THUMP domain-containing protein -0.7 0.34 -0.32
10 AT5G46880 homeobox-7 homeobox-7, HOMEODOMAIN GLABROUS 5 0.7 0.3 -0.32
11 AT5G61030 glycine-rich RNA-binding protein 3 glycine-rich RNA-binding protein 3 -0.7 0.32 -0.31
12 AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln)
family protein		 -0.7 0.33 -0.32
13 AT5G54980 Uncharacterised protein family (UPF0497) 0.69 0.32 -0.32
14 AT3G43510 transposable element gene -0.69 0.32 -0.34
15 AT5G04870 calcium dependent protein kinase 1 ATCPK1, calcium dependent protein
kinase 1		 -0.69 0.32 -0.31
16 AT2G34020 Calcium-binding EF-hand family protein -0.69 0.33 -0.3
17 AT4G22200 potassium transport 2/3 AKT2, potassium transport 2/3,
AKT3, potassium transport 2/3		 0.68 0.34 -0.3
18 AT4G32400 Mitochondrial substrate carrier family protein ARABIDOPSIS THALIANA BRITTLE 1,
EMBRYO DEFECTIVE 104, EMBRYO
DEFECTIVE 42, SODIUM
HYPERSENSITIVE 1		 -0.68 0.3 -0.3
19 AT5G55610 unknown protein; LOCATED IN: mitochondrion, chloroplast,
plastid, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.68 0.31 -0.32
20 AT4G13850 glycine-rich RNA-binding protein 2 GLYCINE-RICH RNA-BINDING PROTEIN
2, glycine-rich RNA-binding
protein 2, glycine rich protein 2		 -0.68 0.31 -0.31
21 AT1G02870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome biogenesis protein Nop16
(InterPro:IPR019002); Has 104 Blast hits to 104 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.68 0.33 -0.31
22 AT5G64680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 114 Blast hits to 110
proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa -
42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes
- 25 (source: NCBI BLink).		 -0.67 0.32 -0.33
23 AT3G53610 RAB GTPase homolog 8 RAB GTPase homolog 8, AtRab8B,
AtRABE1a, RAB GTPase homolog 8		 -0.67 0.32 -0.31
24 AT2G44820 unknown protein; Has 70 Blast hits to 70 proteins in 25
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4;
Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 -0.67 0.3 -0.32
25 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 0.67 0.32 -0.32
26 AT5G04600 RNA-binding (RRM/RBD/RNP motifs) family protein -0.67 0.32 -0.32
27 AT2G03510 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 -0.67 0.32 -0.3
28 AT5G63990 Inositol monophosphatase family protein -0.67 0.32 -0.32
29 AT3G25730 ethylene response DNA binding factor 3 ethylene response DNA binding
factor 3		 -0.66 0.33 -0.32
30 AT1G04610 YUCCA 3 YUCCA 3 -0.66 0.33 -0.32
31 AT5G10930 CBL-interacting protein kinase 5 CBL-interacting protein kinase 5,
SNF1-RELATED PROTEIN KINASE 3.24		 0.66 0.31 -0.32
32 AT4G33070 Thiamine pyrophosphate dependent pyruvate decarboxylase
family protein		 -0.66 0.33 -0.3
33 AT3G14290 20S proteasome alpha subunit E2 20S proteasome alpha subunit E2 -0.66 0.29 -0.32
34 AT1G19370 unknown protein; LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 -0.66 0.32 -0.32
35 AT5G57620 myb domain protein 36 myb domain protein 36, myb domain
protein 36		 -0.66 0.33 -0.35
36 AT1G16780 Inorganic H pyrophosphatase family protein AtVHP2;2, VHP2;2 0.66 0.3 -0.31
37 AT2G40620 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.65 0.31 -0.32
38 AT5G14450 GDSL-like Lipase/Acylhydrolase superfamily protein 0.65 0.33 -0.33
39 AT1G07615 GTP-binding protein Obg/CgtA -0.65 0.32 -0.32
40 AT1G51840 protein kinase-related -0.65 0.32 -0.3
41 AT4G16745 Exostosin family protein 0.65 0.3 -0.3
42 AT1G22200 Endoplasmic reticulum vesicle transporter protein -0.65 0.33 -0.32
43 AT5G52820 WD-40 repeat family protein / notchless protein, putative -0.65 0.3 -0.3
44 AT3G60450 Phosphoglycerate mutase family protein -0.65 0.33 -0.31
45 AT3G63400 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.65 0.31 -0.31
46 AT2G05370 BEST Arabidopsis thaliana protein match is: RNA-dependent
RNA polymerase 6 (TAIR:AT3G49500.1); Has 65 Blast hits to
37 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.32
47 AT5G22840 Protein kinase superfamily protein -0.65 0.3 -0.31
48 AT5G57350 H(+)-ATPase 3 H(+)-ATPase 3, ARABIDOPSIS
THALIANA ARABIDOPSIS H(+)-ATPASE,
H(+)-ATPase 3		 0.65 0.32 -0.32
49 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3		 0.65 0.31 -0.3
50 AT1G02020 nitroreductase family protein 0.64 0.33 -0.3
51 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR -0.64 0.33 -0.32
52 AT1G23100 GroES-like family protein -0.64 0.31 -0.33
53 AT2G45070 Preprotein translocase Sec, Sec61-beta subunit protein SUPPRESSORS OF SECRETION-DEFECTIVE
61 BETA		 -0.64 0.3 -0.31
54 AT2G30640 transposable element gene -0.64 0.31 -0.32
55 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid -0.64 0.3 -0.33
56 AT1G14080 fucosyltransferase 6 ATFUT6, fucosyltransferase 6 -0.63 0.29 -0.33
57 AT2G43880 Pectin lyase-like superfamily protein -0.63 0.35 -0.31
58 AT5G37780 calmodulin 1 ACAM-1, calmodulin 1, TOUCH 1 -0.63 0.31 -0.31
59 AT1G30160 Protein of unknown function (DUF295) 0.63 0.3 -0.33
60 AT1G03070 Bax inhibitor-1 family protein 0.63 0.29 -0.32
61 AT1G63240 unknown protein; Has 460 Blast hits to 413 proteins in 106
species: Archae - 5; Bacteria - 12; Metazoa - 152; Fungi -
46; Plants - 43; Viruses - 2; Other Eukaryotes - 200
(source: NCBI BLink).		 0.63 0.3 -0.33
62 AT1G52930 Ribosomal RNA processing Brix domain protein -0.63 0.31 -0.31
63 AT1G12740 cytochrome P450, family 87, subfamily A, polypeptide 2 cytochrome P450, family 87,
subfamily A, polypeptide 2		 -0.63 0.32 -0.32
64 AT5G44110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette A21,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN, ATPOP1, POP1		 -0.63 0.3 -0.31
65 AT1G71050 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 20		 0.63 0.31 -0.3
66 AT5G39580 Peroxidase superfamily protein -0.62 0.32 -0.31
67 AT5G22330 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATTIP49A, RESISTANCE TO
PSEUDOMONAS SYRINGAE PV MACULICOLA
INTERACTOR 1		 -0.62 0.32 -0.34
68 AT4G36680 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.31 -0.3
69 AT4G38130 histone deacetylase 1 ARABIDOPSIS HISTONE DEACETYLASE 1,
ARABIDOPSIS HISTONE DEACETYLASE
19, histone deacetylase 1, HDA1,
HISTONE DEACETYLASE 19, RPD3A		 -0.62 0.29 -0.32
70 AT5G13850 nascent polypeptide-associated complex subunit alpha-like
protein 3		 nascent polypeptide-associated
complex subunit alpha-like protein
3		 -0.62 0.3 -0.32
71 AT5G03230 Protein of unknown function, DUF584 0.62 0.33 -0.34
72 AT5G40590 Cysteine/Histidine-rich C1 domain family protein -0.62 0.32 -0.33
73 AT2G47640 Small nuclear ribonucleoprotein family protein -0.62 0.32 -0.31
74 AT1G23720 Proline-rich extensin-like family protein -0.62 0.31 -0.35
75 AT1G03905 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette I19 -0.62 0.33 -0.32
76 AT1G13000 Protein of unknown function (DUF707) -0.62 0.31 -0.31
77 AT1G30960 GTP-binding family protein -0.62 0.34 -0.3
78 AT1G71940 SNARE associated Golgi protein family -0.62 0.33 -0.31
79 AT4G02930 GTP binding Elongation factor Tu family protein -0.62 0.33 -0.3
80 AT2G20370 Exostosin family protein AtMUR3, KATAMARI 1, MURUS 3 -0.62 0.32 -0.29
81 AT2G36320 A20/AN1-like zinc finger family protein -0.61 0.3 -0.33
82 AT4G35510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G17540.3); Has 182 Blast hits
to 179 proteins in 73 species: Archae - 0; Bacteria - 87;
Metazoa - 17; Fungi - 9; Plants - 50; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 -0.61 0.32 -0.32
83 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 0.61 0.34 -0.29
84 AT4G30640 RNI-like superfamily protein -0.61 0.32 -0.3
85 AT3G57360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits
to 122 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.61 0.29 -0.32
86 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 0.61 0.3 -0.33
87 AT1G69810 WRKY DNA-binding protein 36 ATWRKY36, WRKY DNA-binding protein
36		 -0.61 0.32 -0.33
88 AT3G50010 Cysteine/Histidine-rich C1 domain family protein -0.61 0.31 -0.33
89 AT3G03060 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.3 -0.31
90 AT4G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.32 -0.33
91 AT3G23590 REF4-related 1 MED33A, REF4-related 1 0.6 0.33 -0.32
92 AT2G41110 calmodulin 2 ATCAL5, calmodulin 2 -0.6 0.33 -0.31
93 AT5G22790 reticulata-related 1 reticulata-related 1 -0.6 0.31 -0.31
94 AT5G53290 cytokinin response factor 3 cytokinin response factor 3 -0.6 0.33 -0.32
95 AT3G59990 methionine aminopeptidase 2B methionine aminopeptidase 2B -0.6 0.3 -0.34
96 AT4G31580 serine/arginine-rich 22 RS-containing zinc finger protein
22, RS-containing zinc finger
protein 22, RS-CONTAINING ZINC
FINGER PROTEIN 22,
serine/arginine-rich 22, SRZ22		 -0.6 0.32 -0.32
97 AT2G34080 Cysteine proteinases superfamily protein -0.6 0.31 -0.31
98 AT1G32360 Zinc finger (CCCH-type) family protein 0.6 0.32 -0.3
99 AT1G53340 Cysteine/Histidine-rich C1 domain family protein -0.6 0.3 -0.29
100 AT5G63660 Scorpion toxin-like knottin superfamily protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
74, PDF2.5		 -0.6 0.32 -0.33
101 AT4G11850 phospholipase D gamma 1 maternal effect embryo arrest 54,
phospholipase D gamma 1		 -0.6 0.3 -0.31
102 AT1G19835 Plant protein of unknown function (DUF869) 0.59 0.29 -0.32
103 AT5G04380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.59 0.31 -0.32
104 AT4G27840 SNARE-like superfamily protein 0.59 0.33 -0.31
105 AT3G27540 beta-1,4-N-acetylglucosaminyltransferase family protein 0.59 0.33 -0.32
106 AT3G51590 lipid transfer protein 12 lipid transfer protein 12 0.58 0.32 -0.3
107 AT5G07050 nodulin MtN21 /EamA-like transporter family protein 0.58 0.3 -0.3
108 AT5G23800 DOMAIN OF UNKNOWN FUNCTION 724 10 DOMAIN OF UNKNOWN FUNCTION 724 10,
DOMAIN OF UNKNOWN FUNCTION 724 10		 0.58 0.31 -0.32
109 AT3G56440 homolog of yeast autophagy 18 (ATG18) D homolog of yeast autophagy 18
(ATG18) D, homolog of yeast
autophagy 18 (ATG18) D		 0.58 0.32 -0.33
110 AT5G14880 Potassium transporter family protein 0.57 0.34 -0.34
111 AT3G50440 methyl esterase 10 ARABIDOPSIS THALIANA METHYL
ESTERASE 10, methyl esterase 10		 0.57 0.3 -0.32
112 AT5G27950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.57 0.29 -0.3
113 AT5G52460 FBD, F-box and Leucine Rich Repeat domains containing
protein		 embryo sac development arrest 41 0.57 0.32 -0.32
114 AT5G51290 Diacylglycerol kinase family protein 0.57 0.32 -0.32
115 AT1G31310 hydroxyproline-rich glycoprotein family protein 0.57 0.32 -0.3
116 AT5G26190 Cysteine/Histidine-rich C1 domain family protein 0.57 0.34 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
117 C0227 Ribose D-Ribose D-Ribose ribose degradation,
guanosine nucleotides degradation I,
pyrimidine salvage pathway,
pyridine nucleotide cycling (plants),
adenine and adenosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage II,
cis-zeatin biosynthesis,
adenosine nucleotides degradation I,
pyrimidine ribonucleosides degradation II 		-0.73 0.45 -0.49 C0227
118 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		0.69 0.42 -0.44 C0010
119 C0239 Spermidine - Spermidine spermine biosynthesis,
spermine and spermidine degradation III,
beta-alanine biosynthesis I,
hypusine biosynthesis,
spermidine hydroxycinnamic acid conjugates biosynthesis,
spermidine biosynthesis I 		-0.65 0.45 -0.46 C0239
120 C0211 PR_MST_2158.8 - - - 0.58 0.42 -0.41