AT3G06700 : -
Query Information
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AGICode AT3G06700
Description Ribosomal L29e protein family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G06700 Ribosomal L29e protein family 1 0.34 -0.33
2 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B 0.9 0.33 -0.32
3 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4		 0.9 0.32 -0.31
4 AT1G29250 Alba DNA/RNA-binding protein 0.9 0.31 -0.3
5 AT3G58700 Ribosomal L5P family protein 0.89 0.32 -0.33
6 AT1G26880 Ribosomal protein L34e superfamily protein 0.88 0.32 -0.34
7 AT3G23390 Zinc-binding ribosomal protein family protein 0.88 0.35 -0.32
8 AT3G16780 Ribosomal protein L19e family protein 0.88 0.3 -0.33
9 AT1G07070 Ribosomal protein L35Ae family protein 0.87 0.35 -0.32
10 AT3G20050 T-complex protein 1 alpha subunit T-complex protein 1 alpha subunit,
T-complex protein 1 alpha subunit		 0.87 0.3 -0.32
11 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.87 0.31 -0.33
12 AT2G39390 Ribosomal L29 family protein 0.87 0.31 -0.32
13 AT3G09630 Ribosomal protein L4/L1 family 0.87 0.31 -0.3
14 AT3G56070 rotamase cyclophilin 2 rotamase cyclophilin 2 0.86 0.3 -0.33
15 AT3G18130 receptor for activated C kinase 1C receptor for activated C kinase
1C, receptor for activated C
kinase 1C		 0.86 0.32 -0.32
16 AT5G47210 Hyaluronan / mRNA binding family 0.86 0.31 -0.3
17 AT3G55280 ribosomal protein L23AB RIBOSOMAL PROTEIN L23A2, ribosomal
protein L23AB		 0.86 0.32 -0.3
18 AT2G19730 Ribosomal L28e protein family 0.86 0.31 -0.31
19 AT4G26230 Ribosomal protein L31e family protein 0.86 0.3 -0.31
20 AT5G27850 Ribosomal protein L18e/L15 superfamily protein 0.85 0.32 -0.32
21 AT3G59540 Ribosomal L38e protein family 0.85 0.3 -0.32
22 AT4G34555 Ribosomal protein S25 family protein 0.85 0.31 -0.31
23 AT1G34030 Ribosomal protein S13/S18 family 0.85 0.31 -0.31
24 AT3G47370 Ribosomal protein S10p/S20e family protein 0.85 0.3 -0.31
25 AT5G22440 Ribosomal protein L1p/L10e family 0.85 0.33 -0.29
26 AT3G16080 Zinc-binding ribosomal protein family protein 0.85 0.31 -0.32
27 AT4G30840 Transducin/WD40 repeat-like superfamily protein 0.85 0.31 -0.35
28 AT3G04770 40s ribosomal protein SA B 40s ribosomal protein SA B 0.84 0.29 -0.31
29 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.84 0.32 -0.31
30 AT2G25210 Ribosomal protein L39 family protein 0.84 0.31 -0.33
31 AT4G27380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.84 0.3 -0.32
32 AT3G61110 ribosomal protein S27 ribosomal protein S27, ribosomal
protein S27		 0.84 0.29 -0.32
33 AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.84 0.32 -0.32
34 AT2G19750 Ribosomal protein S30 family protein 0.84 0.3 -0.35
35 AT5G47700 60S acidic ribosomal protein family 0.84 0.31 -0.3
36 AT3G06610 DNA-binding enhancer protein-related 0.84 0.33 -0.32
37 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 0.84 0.31 -0.31
38 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10		 0.84 0.31 -0.32
39 AT5G22650 histone deacetylase 2B ARABIDOPSIS HISTONE DEACETYLASE 2,
ATHD2B, HISTONE DEACETYLASE 2,
histone deacetylase 2B, HDA4,
HDT02, HDT2		 0.84 0.34 -0.32
40 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8		 0.84 0.29 -0.31
41 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 0.84 0.31 -0.33
42 AT3G13230 RNA-binding KH domain-containing protein 0.84 0.32 -0.33
43 AT1G27400 Ribosomal protein L22p/L17e family protein 0.83 0.33 -0.32
44 AT5G67510 Translation protein SH3-like family protein 0.83 0.33 -0.31
45 AT4G19860 alpha/beta-Hydrolases superfamily protein -0.83 0.32 -0.3
46 AT1G74270 Ribosomal protein L35Ae family protein 0.83 0.33 -0.32
47 AT1G63660 GMP synthase (glutamine-hydrolyzing), putative / glutamine
amidotransferase, putative		 0.83 0.32 -0.32
48 AT3G44750 histone deacetylase 3 ATHD2A, HISTONE DEACETYLASE 2A,
histone deacetylase 3, HDT1		 0.83 0.31 -0.31
49 AT4G12600 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.83 0.31 -0.32
50 AT3G23940 dehydratase family 0.82 0.32 -0.3
51 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 0.82 0.28 -0.31
52 AT4G38100 unknown protein; LOCATED IN: chloroplast thylakoid
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G01150.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.82 0.3 -0.31
53 AT1G17560 Ribosomal protein L14p/L23e family protein HUELLENLOS 0.82 0.33 -0.33
54 AT3G53960 Major facilitator superfamily protein -0.82 0.32 -0.34
55 AT5G59850 Ribosomal protein S8 family protein 0.82 0.31 -0.33
56 AT1G79650 Rad23 UV excision repair protein family Arabidopsis thaliana aldehyde
oxidase 1, RADIATION SENSITIVE23B		 0.82 0.31 -0.33
57 AT3G56090 ferritin 3 ferritin 3, ferritin 3 0.82 0.32 -0.3
58 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.81 0.31 -0.3
59 AT3G57490 Ribosomal protein S5 family protein 0.81 0.32 -0.32
60 AT2G25625 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; Has 24 Blast hits to 24 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.8 0.3 -0.33
61 AT4G11420 eukaryotic translation initiation factor 3A ATEIF3A-1, ATTIF3A1, eukaryotic
translation initiation factor 3A,
EIF3A-1, TIF3A1		 0.8 0.29 -0.31
62 AT3G10250 Plant protein 1589 of unknown function -0.8 0.31 -0.32
63 AT1G31860 histidine biosynthesis bifunctional protein (HISIE) AT-IE, HISTIDINE BIOSYNTHESIS 2 0.8 0.31 -0.34
64 AT1G52300 Zinc-binding ribosomal protein family protein 0.8 0.33 -0.31
65 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.8 0.34 -0.34
66 AT3G52580 Ribosomal protein S11 family protein 0.8 0.3 -0.33
67 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.8 0.31 -0.32
68 AT1G48630 receptor for activated C kinase 1B receptor for activated C kinase
1B, receptor for activated C
kinase 1B		 0.8 0.31 -0.33
69 AT2G21580 Ribosomal protein S25 family protein 0.8 0.32 -0.34
70 AT5G05470 eukaryotic translation initiation factor 2 alpha subunit ATEIF2-A2, eukaryotic translation
initiation factor 2 alpha subunit,
EIF2-A2		 0.8 0.33 -0.32
71 AT2G14460 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.8 0.32 -0.32
72 AT4G32720 La protein 1 La protein 1, La protein 1 0.8 0.33 -0.3
73 AT2G34260 transducin family protein / WD-40 repeat family protein human WDR55 (WD40 repeat) homolog 0.8 0.32 -0.32
74 AT2G23350 poly(A) binding protein 4 poly(A) binding protein 4, POLY(A)
BINDING PROTEIN 4		 0.8 0.32 -0.33
75 AT1G50920 Nucleolar GTP-binding protein 0.8 0.31 -0.33
76 AT4G03030 Galactose oxidase/kelch repeat superfamily protein -0.8 0.32 -0.29
77 AT4G25630 fibrillarin 2 ATFIB2, fibrillarin 2 0.8 0.33 -0.3
78 AT2G19740 Ribosomal protein L31e family protein 0.8 0.31 -0.33
79 AT5G62440 Protein of unknown function (DUF3223) 0.8 0.32 -0.31
80 AT4G19840 phloem protein 2-A1 phloem protein 2-A1, phloem
protein 2-A1, phloem protein 2-A1		 -0.8 0.3 -0.31
81 AT4G37980 elicitor-activated gene 3-1 ATCAD7, CINNAMYL-ALCOHOL
DEHYDROGENASE 7,
ELICITOR-ACTIVATED GENE 3,
elicitor-activated gene 3-1		 -0.79 0.33 -0.31
82 AT4G36210 Protein of unknown function (DUF726) -0.79 0.34 -0.31
83 AT1G28960 nudix hydrolase homolog 15 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 15, nudix
hydrolase homolog 15, nudix
hydrolase homolog 15		 -0.79 0.31 -0.31
84 AT1G18710 myb domain protein 47 myb domain protein 47, myb domain
protein 47		 -0.79 0.31 -0.34
85 AT2G20920 Protein of unknown function (DUF3353) -0.78 0.32 -0.33
86 AT3G54360 zinc ion binding -0.78 0.31 -0.32
87 AT1G21410 F-box/RNI-like superfamily protein SKP2A -0.78 0.29 -0.32
88 AT5G54080 homogentisate 1,2-dioxygenase homogentisate 1,2-dioxygenase -0.78 0.3 -0.33
89 AT3G09770 RING/U-box superfamily protein LOSS OF GDU 2 -0.78 0.32 -0.33
90 AT5G13800 pheophytinase Co-regulated with NYE1,
pheophytinase		 -0.77 0.29 -0.32
91 AT3G26580 Tetratricopeptide repeat (TPR)-like superfamily protein -0.77 0.3 -0.31
92 AT2G33380 Caleosin-related family protein Arabidopsis thaliana caleosin 3,
caleosin 3, caleosin 3, RESPONSIVE
TO DESSICATION 20		 -0.77 0.32 -0.32
93 AT2G40830 RING-H2 finger C1A RING-H2 finger C1A -0.77 0.31 -0.3
94 AT1G52000 Mannose-binding lectin superfamily protein -0.77 0.31 -0.31
95 AT1G55280 Lipase/lipooxygenase, PLAT/LH2 family protein -0.77 0.31 -0.31
96 AT4G27990 YGGT family protein ATYLMG1-2, YLMG1-2 -0.77 0.32 -0.33
97 AT3G21270 DOF zinc finger protein 2 DOF zinc finger protein 2, DOF
zinc finger protein 2		 -0.77 0.31 -0.29
98 AT2G22430 homeobox protein 6 homeobox protein 6, homeobox
protein 6		 -0.77 0.33 -0.34
99 AT5G18640 alpha/beta-Hydrolases superfamily protein -0.76 0.3 -0.33
100 AT1G73740 UDP-Glycosyltransferase superfamily protein -0.76 0.33 -0.33
101 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.33 -0.31
102 AT1G17550 homology to ABI2 homology to ABI2 -0.76 0.3 -0.32
103 AT3G19620 Glycosyl hydrolase family protein -0.76 0.33 -0.31
104 AT2G44130 Galactose oxidase/kelch repeat superfamily protein -0.76 0.33 -0.32
105 AT1G62310 transcription factor jumonji (jmjC) domain-containing
protein		 -0.75 0.31 -0.32
106 AT2G37870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.75 0.32 -0.3
107 AT1G12050 fumarylacetoacetase, putative -0.75 0.29 -0.31
108 AT1G24070 cellulose synthase-like A10 cellulose synthase-like A10,
CELLULOSE SYNTHASE LIKE A10,
cellulose synthase-like A10		 -0.75 0.32 -0.32
109 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.74 0.31 -0.32
110 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 -0.74 0.32 -0.32
111 AT1G01240 unknown protein; INVOLVED IN: N-terminal protein
myristoylation; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 11 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16
species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0;
Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.74 0.33 -0.3
112 AT5G20900 jasmonate-zim-domain protein 12 jasmonate-zim-domain protein 12,
TIFY3B		 -0.74 0.3 -0.31
113 AT1G36380 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 15 growth
stages; Has 14 Blast hits to 14 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.32 -0.32
114 AT1G08460 histone deacetylase 8 ATHDA8, histone deacetylase 8,
HISTONE DEACETYLASE 8		 -0.73 0.35 -0.31
115 AT1G58200 MSCS-like 3 MSCS-like 3 -0.73 0.34 -0.3
116 AT3G28007 Nodulin MtN3 family protein AtSWEET4, SWEET4 -0.73 0.3 -0.33
117 AT5G65840 Thioredoxin superfamily protein -0.73 0.31 -0.31
118 AT4G27470 RING membrane-anchor 3 ATRMA3, RING membrane-anchor 3 -0.72 0.31 -0.31
119 AT4G11570 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.72 0.31 -0.31
120 AT3G26740 CCR-like CCR-like -0.72 0.33 -0.33
121 AT5G58740 HSP20-like chaperones superfamily protein -0.72 0.32 -0.33
122 AT5G66050 Wound-responsive family protein -0.72 0.32 -0.34
123 AT4G17940 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.31 -0.32
124 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.71 0.33 -0.31
125 AT4G15440 hydroperoxide lyase 1 CYP74B2, hydroperoxide lyase 1 -0.71 0.31 -0.33
126 AT1G22710 sucrose-proton symporter 2 ARABIDOPSIS THALIANA
SUCROSE-PROTON SYMPORTER 2,
sucrose-proton symporter 2,
SUCROSE TRANSPORTER 1		 -0.71 0.32 -0.3
127 AT5G05230 RING/U-box superfamily protein -0.7 0.3 -0.31
128 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 -0.7 0.32 -0.29
129 AT4G18160 Ca2+ activated outward rectifying K+ channel 6 CA2+ ACTIVATED OUTWARD RECTIFYING
K+ CHANNEL 6, ATTPK3, Ca2+
activated outward rectifying K+
channel 6, TPK3		 -0.7 0.32 -0.3
130 AT2G46550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits
to 68 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.31 -0.32
131 AT5G16150 plastidic GLC translocator GLUCOSE TRANSPORTER 1, plastidic
GLC translocator		 -0.7 0.3 -0.31
132 AT5G19860 Protein of unknown function, DUF538 -0.7 0.35 -0.34
133 AT5G27280 Zim17-type zinc finger protein -0.7 0.33 -0.32
134 AT3G23690 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.7 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
135 C0054 Agmatine - Agmatine putrescine biosynthesis I,
putrescine biosynthesis II,
superpathway of polyamine biosynthesis 		-0.74 0.3 -0.3 C0054
136 C0257 Tryptophan L-Tryptophan L-Tryptophan glucosinolate biosynthesis from tryptophan,
IAA biosynthesis I,
tryptophan biosynthesis,
camalexin biosynthesis,
tRNA charging 		-0.7 0.33 -0.33 C0257