AT3G06950 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G06950
Description Pseudouridine synthase family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G06950 Pseudouridine synthase family protein 1 0.3 -0.31
2 AT3G19810 Protein of unknown function (DUF177) 0.91 0.3 -0.29
3 AT3G18680 Amino acid kinase family protein 0.89 0.32 -0.33
4 AT3G05410 Photosystem II reaction center PsbP family protein 0.88 0.31 -0.32
5 AT5G46420 16S rRNA processing protein RimM family 0.88 0.32 -0.31
6 AT2G17033 pentatricopeptide (PPR) repeat-containing protein 0.86 0.32 -0.3
7 AT1G51100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 26
Blast hits to 26 proteins in 9 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.86 0.32 -0.3
8 AT5G15210 homeobox protein 30 homeobox protein 30, homeobox
protein 30, ZINC FINGER
HOMEODOMAIN 3, ZINC FINGER
HOMEODOMAIN 8		 0.85 0.32 -0.31
9 AT1G21350 Thioredoxin superfamily protein 0.85 0.31 -0.31
10 AT2G17972 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 14 growth stages;
Has 34 Blast hits to 34 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.85 0.34 -0.32
11 AT5G15390 tRNA/rRNA methyltransferase (SpoU) family protein 0.85 0.32 -0.3
12 AT4G38490 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.84 0.35 -0.33
13 AT3G20680 Domain of unknown function (DUF1995) 0.83 0.32 -0.31
14 AT3G58140 phenylalanyl-tRNA synthetase class IIc family protein 0.83 0.32 -0.31
15 AT1G32200 phospholipid/glycerol acyltransferase family protein ACYLTRANSFERASE 1, ATS1 0.83 0.32 -0.32
16 AT4G31040 CemA-like proton extrusion protein-related 0.83 0.3 -0.31
17 AT3G23760 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: vacuole; EXPRESSED
IN: 20 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is:
transferases, transferring glycosyl groups
(TAIR:AT4G14100.1); Has 108 Blast hits to 104 proteins in
19 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi -
0; Plants - 90; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 0.83 0.32 -0.32
18 AT3G12685 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 0.83 0.31 -0.33
19 AT4G13220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 27 Blast hits to 27 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.83 0.35 -0.31
20 AT5G66090 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.83 0.32 -0.3
21 AT5G08340 Nucleotidylyl transferase superfamily protein 0.83 0.31 -0.33
22 AT5G67070 ralf-like 34 ralf-like 34 0.82 0.31 -0.31
23 AT2G47940 DEGP protease 2 DEGP protease 2, EMBRYO DEFECTIVE
3117		 0.82 0.32 -0.29
24 AT2G20020 RNA-binding CRS1 / YhbY (CRM) domain-containing protein ATCAF1, CAF1 0.82 0.32 -0.31
25 AT5G02710 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Uncharacterised protein family
UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240
proteins in 73 species: Archae - 10; Bacteria - 110;
Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other
Eukaryotes - 95 (source: NCBI BLink).		 0.82 0.31 -0.34
26 AT2G44650 chloroplast chaperonin 10 chloroplast chaperonin 10,
CHLOROPLAST CHAPERONIN 10		 0.82 0.31 -0.32
27 AT1G33290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.81 0.3 -0.29
28 AT3G24590 plastidic type i signal peptidase 1 plastidic type i signal peptidase
1		 0.81 0.32 -0.33
29 AT5G11580 Regulator of chromosome condensation (RCC1) family protein 0.81 0.35 -0.32
30 AT3G29230 Tetratricopeptide repeat (TPR)-like superfamily protein 0.81 0.31 -0.32
31 AT1G77060 Phosphoenolpyruvate carboxylase family protein 0.81 0.34 -0.29
32 AT5G19170 Protein of Unknown Function (DUF239) 0.81 0.34 -0.31
33 AT2G31890 RAP ATRAP, RAP 0.81 0.31 -0.32
34 AT5G28750 Bacterial sec-independent translocation protein mttA/Hcf106 0.8 0.3 -0.33
35 AT2G39290 phosphatidylglycerolphosphate synthase 1 phosphatidylglycerolphosphate
synthase 1,
PHOSPHATIDYLGLYCEROLPHOSPHATE
SYNTHASE 1, PGS1		 0.8 0.29 -0.31
36 AT5G47840 adenosine monophosphate kinase adenosine monophosphate kinase 0.8 0.32 -0.31
37 AT3G26440 Protein of unknown function (DUF707) -0.72 0.3 -0.31
38 AT4G23690 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.67 0.34 -0.3
39 AT4G37410 cytochrome P450, family 81, subfamily F, polypeptide 4 cytochrome P450, family 81,
subfamily F, polypeptide 4		 -0.65 0.32 -0.31
40 AT2G17090 Protein kinase protein with tetratricopeptide repeat domain SHORT SUSPENSOR -0.65 0.32 -0.29
41 AT3G22600 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.64 0.31 -0.32
42 AT1G05577 Domain of unknown function (DUF966) -0.64 0.32 -0.33
43 AT5G14130 Peroxidase superfamily protein -0.63 0.31 -0.33
44 AT3G13100 multidrug resistance-associated protein 7 ATP-binding cassette C7, multidrug
resistance-associated protein 7,
MRP7, multidrug
resistance-associated protein 7		 -0.62 0.32 -0.31
45 AT5G14550 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.61 0.33 -0.31
46 AT3G62270 HCO3- transporter family -0.61 0.31 -0.31
47 AT4G36740 homeobox protein 40 homeobox protein 40, HB-5,
homeobox protein 40		 -0.6 0.33 -0.32
48 AT3G22620 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.6 0.3 -0.3
49 AT1G68850 Peroxidase superfamily protein -0.6 0.32 -0.31
50 AT4G09940 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.31 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
51 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.77 0.45 -0.43 C0051