AT3G06940 : -
Query Information
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AGICode AT3G06940
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G06940 transposable element gene 1 0.3 -0.33
2 AT2G36350 Protein kinase superfamily protein 0.7 0.29 -0.32
3 AT2G33730 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.33 -0.32
4 AT1G01510 NAD(P)-binding Rossmann-fold superfamily protein ANGUSTIFOLIA 0.67 0.28 -0.3
5 AT1G17070 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 0.67 0.3 -0.31
6 AT1G50660 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins
in 1325 species: Archae - 461; Bacteria - 2309; Metazoa -
11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other
Eukaryotes - 4809 (source: NCBI BLink).		 0.65 0.28 -0.33
7 AT4G10280 RmlC-like cupins superfamily protein -0.63 0.32 -0.29
8 AT3G04820 Pseudouridine synthase family protein 0.63 0.32 -0.31
9 AT2G07320 transposable element gene 0.63 0.3 -0.32
10 AT2G39120 Ubiquitin carboxyl-terminal hydrolase family protein what's this factor 9 0.63 0.32 -0.33
11 AT5G64270 splicing factor, putative 0.63 0.32 -0.31
12 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 -0.62 0.29 -0.31
13 AT5G42950 GYF domain-containing protein 0.62 0.32 -0.31
14 AT1G17210 IAP-like protein 1 ARABIDOPSIS IAP-LIKE PROTEIN,
IAP-like protein 1		 0.62 0.31 -0.28
15 AT4G34430 DNA-binding family protein SWITCH/SUCROSE NONFERMENTING 3D,
CHB3		 0.62 0.33 -0.32
16 AT2G07330 transposable element gene 0.62 0.31 -0.28
17 AT2G29250 Concanavalin A-like lectin protein kinase family protein -0.62 0.3 -0.31
18 AT3G12890 activator of spomin::LUC2 activator of spomin::LUC2 -0.61 0.33 -0.32
19 AT1G48120 hydrolases;protein serine/threonine phosphatases 0.61 0.31 -0.3
20 AT1G35790 transposable element gene 0.6 0.32 -0.32
21 AT5G47580 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17250.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 ALTERED SEED GERMINATION 7 0.59 0.32 -0.32
22 AT5G38840 SMAD/FHA domain-containing protein 0.59 0.32 -0.3
23 AT3G24360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.59 0.33 -0.34
24 AT3G24490 Alcohol dehydrogenase transcription factor Myb/SANT-like
family protein		 0.59 0.32 -0.3
25 AT2G06630 transposable element gene 0.59 0.3 -0.3
26 AT4G24680 modifier of snc1 MODIFIER OF snc1 0.59 0.3 -0.32
27 AT2G47120 NAD(P)-binding Rossmann-fold superfamily protein -0.59 0.33 -0.29
28 AT1G07300 josephin protein-related -0.59 0.34 -0.31
29 AT1G22810 Integrase-type DNA-binding superfamily protein -0.58 0.31 -0.33
30 AT3G14860 NHL domain-containing protein 0.58 0.32 -0.31
31 AT5G58120 Disease resistance protein (TIR-NBS-LRR class) family -0.58 0.32 -0.33
32 AT2G46400 WRKY DNA-binding protein 46 WRKY DNA-BINDING PROTEIN 46, WRKY
DNA-binding protein 46		 -0.57 0.32 -0.34
33 AT5G42700 AP2/B3-like transcriptional factor family protein -0.57 0.33 -0.31
34 AT5G46620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.57 0.33 -0.32
35 AT1G22460 O-fucosyltransferase family protein -0.57 0.31 -0.31
36 AT4G18260 Cytochrome b561/ferric reductase transmembrane protein
family		 0.57 0.32 -0.32
37 AT1G48560 unknown protein; Has 75 Blast hits to 71 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 69; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.57 0.31 -0.32
38 AT5G67550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: 4 anthesis; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits
to 154 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.32 -0.3
39 AT2G38350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; Has 1 Blast hits to 1 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.32 -0.31
40 AT2G13810 AGD2-like defense response protein 1 AGD2-like defense response protein
1, eds two suppressor 5		 -0.56 0.33 -0.31
41 AT5G51170 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0406
(InterPro:IPR019146); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.56 0.34 -0.32
42 AT4G27280 Calcium-binding EF-hand family protein -0.56 0.29 -0.3
43 AT4G04550 transposable element gene 0.56 0.32 -0.33
44 AT2G33540 C-terminal domain phosphatase-like 3 ATCPL3, C-terminal domain
phosphatase-like 3		 0.56 0.31 -0.31
45 AT5G61600 ethylene response factor 104 ethylene response factor 104 -0.56 0.3 -0.29
46 AT4G19660 NPR1-like protein 4 ATNPR4, NPR1-like protein 4 -0.55 0.33 -0.31
47 AT1G21550 Calcium-binding EF-hand family protein -0.55 0.32 -0.33
48 AT1G15920 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.55 0.3 -0.31
49 AT5G24440 CTC-interacting domain 13 CTC-interacting domain 13 -0.55 0.3 -0.32
50 AT5G54480 Protein of unknown function (DUF630 and DUF632) 0.55 0.3 -0.3
51 AT3G42250 transposable element gene -0.55 0.3 -0.33
52 AT2G01610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.55 0.31 -0.32
53 AT3G42310 unknown protein; Has 66 Blast hits to 66 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0;
Plants - 18; Viruses - 31; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.55 0.31 -0.3
54 AT5G25060 RNA recognition motif (RRM)-containing protein 0.55 0.31 -0.32
55 AT3G32260 Nucleic acid-binding proteins superfamily -0.54 0.3 -0.29
56 AT2G06510 replication protein A 1A ARABIDOPSIS THALIANA REPLICATION
PROTEIN A 1A, ARABIDOPSIS THALIANA
RPA70-KDA SUBUNIT A, replication
protein A 1A, RPA70-KDA SUBUNIT A		 0.54 0.31 -0.34
57 AT2G44430 DNA-binding bromodomain-containing protein 0.54 0.31 -0.29
58 AT2G42090 actin 9 actin 9 0.54 0.31 -0.31
59 AT1G48820 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.54 0.32 -0.32
60 AT5G60320 Concanavalin A-like lectin protein kinase family protein -0.53 0.31 -0.29
61 AT3G04750 Tetratricopeptide repeat (TPR)-like superfamily protein 0.53 0.3 -0.32
62 AT2G45040 Matrixin family protein -0.53 0.31 -0.33
63 AT1G79630 Protein phosphatase 2C family protein 0.53 0.3 -0.3
64 AT5G60110 pumilio 18 pumilio 18, pumilio 18 0.53 0.32 -0.31
65 AT4G16710 glycosyltransferase family protein 28 -0.53 0.32 -0.33
66 AT4G27930 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.53 0.31 -0.32
67 AT3G13370 unknown protein; Has 84 Blast hits to 50 proteins in 21
species: Archae - 0; Bacteria - 2; Metazoa - 51; Fungi - 6;
Plants - 20; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.52 0.31 -0.3
68 AT5G59270 Concanavalin A-like lectin protein kinase family protein -0.52 0.31 -0.32
69 AT1G29780 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.52 0.32 -0.31
70 AT1G06270 Pentatricopeptide repeat (PPR) superfamily protein 0.52 0.31 -0.31
71 AT1G31620 unknown protein; Has 9 Blast hits to 9 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.32 -0.34
72 AT1G73540 nudix hydrolase homolog 21 nudix hydrolase homolog 21, nudix
hydrolase homolog 21		 -0.51 0.31 -0.33
73 AT5G57730 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.51 0.33 -0.31
74 AT1G16705 p300/CBP acetyltransferase-related protein-related -0.51 0.31 -0.3
75 AT2G05820 transposable element gene -0.51 0.32 -0.32
76 AT3G06280 F-box associated ubiquitination effector family protein -0.51 0.31 -0.3
77 AT1G30473 Heavy metal transport/detoxification superfamily protein -0.51 0.35 -0.34
78 AT3G28400 transposable element gene -0.51 0.33 -0.31
79 AT5G07570 glycine/proline-rich protein -0.5 0.3 -0.3
80 AT5G51190 Integrase-type DNA-binding superfamily protein -0.5 0.33 -0.33
81 AT4G38560 Arabidopsis phospholipase-like protein (PEARLI 4) family -0.5 0.3 -0.32
82 AT2G06010 OBP3-responsive gene 4 OBP3-responsive gene 4 -0.5 0.33 -0.32
83 AT2G20625 Protein of unknown function (DUF626) -0.5 0.32 -0.33
84 AT2G33260 Tryptophan/tyrosine permease -0.49 0.33 -0.32
85 AT3G58290 TRAF-like superfamily protein -0.49 0.33 -0.31
86 AT5G63060 Sec14p-like phosphatidylinositol transfer family protein -0.49 0.3 -0.31
87 AT2G14610 pathogenesis-related gene 1 PATHOGENESIS-RELATED GENE 1,
PATHOGENESIS-RELATED GENE 1,
pathogenesis-related gene 1		 -0.48 0.3 -0.32
88 AT2G18580 transposable element gene -0.48 0.32 -0.32
89 AT4G08250 GRAS family transcription factor -0.48 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
90 C0126 Isorhamnetin-dirhamnoside - - - 0.72 0.42 -0.44
91 C0080 Digalactosyldiacylglycerol-34:6 - Digalactosyldiacylglycerol-34:6 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.64 0.45 -0.48 C0080