AT3G04220 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G04220
Description Disease resistance protein (TIR-NBS-LRR class) family
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G04220 Disease resistance protein (TIR-NBS-LRR class) family 1 0.32 -0.33
2 AT1G17350 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 -0.73 0.31 -0.31
3 AT2G15720 transposable element gene 0.71 0.29 -0.32
4 AT5G43550 F-box associated ubiquitination effector family protein 0.71 0.3 -0.31
5 AT3G45810 ferric reductase-like transmembrane component family
protein		 0.7 0.31 -0.3
6 AT3G15355 ubiquitin-conjugating enzyme 25 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 1, ubiquitin-conjugating
enzyme 25		 -0.69 0.34 -0.32
7 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 0.68 0.31 -0.3
8 AT2G46000 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Mesoderm development candidate 2 (InterPro:IPR019330); Has
31 Blast hits to 31 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.32 -0.33
9 AT4G11950 Protein of unknown function (DUF1191) 0.65 0.34 -0.32
10 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 0.64 0.33 -0.33
11 AT1G10520 DNA polymerase lambda (POLL) AtPol{lambda}, DNA polymerase
{lambda}		 -0.64 0.3 -0.31
12 AT3G14570 glucan synthase-like 4 glucan synthase-like 4, atgsl4,
gsl04, glucan synthase-like 4		 0.64 0.31 -0.32
13 AT1G64570 Homeodomain-like superfamily protein DUO POLLEN 3 0.64 0.33 -0.31
14 AT3G47800 Galactose mutarotase-like superfamily protein -0.63 0.32 -0.34
15 AT5G13390 no exine formation 1 NO EXINE FORMATION 1 0.63 0.31 -0.29
16 AT1G54280 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.63 0.33 -0.32
17 AT4G28720 Flavin-binding monooxygenase family protein YUCCA 8 -0.63 0.33 -0.32
18 AT3G55030 phosphatidylglycerolphosphate synthase 2 phosphatidylglycerolphosphate
synthase 2		 -0.63 0.3 -0.34
19 AT2G02400 NAD(P)-binding Rossmann-fold superfamily protein -0.63 0.33 -0.31
20 AT3G10220 tubulin folding cofactor B EMBRYO DEFECTIVE 2804 -0.63 0.31 -0.32
21 AT4G00560 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.32 -0.32
22 AT1G28640 GDSL-like Lipase/Acylhydrolase superfamily protein 0.62 0.33 -0.32
23 AT1G44910 pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A,
pre-mRNA-processing protein 40A		 0.62 0.33 -0.32
24 AT1G09020 homolog of yeast sucrose nonfermenting 4 ATSNF4, homolog of yeast sucrose
nonfermenting 4		 0.62 0.31 -0.31
25 AT3G13280 Putative endonuclease or glycosyl hydrolase 0.62 0.3 -0.32
26 AT5G58460 cation/H+ exchanger 25 ARABIDOPSIS THALIANA CATION/H+
EXCHANGER 25, cation/H+ exchanger
25		 0.62 0.33 -0.3
27 AT1G60270 beta glucosidase 6 beta glucosidase 6 0.62 0.3 -0.33
28 AT5G23520 smr (Small MutS Related) domain-containing protein 0.61 0.33 -0.33
29 AT4G04760 Major facilitator superfamily protein 0.61 0.32 -0.28
30 AT1G56100 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.61 0.31 -0.3
31 AT1G03410 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 2A6 0.61 0.33 -0.32
32 AT3G19320 Leucine-rich repeat (LRR) family protein 0.61 0.31 -0.32
33 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 -0.61 0.3 -0.3
34 AT4G11650 osmotin 34 osmotin 34, osmotin 34 -0.61 0.34 -0.29
35 AT5G36870 glucan synthase-like 9 glucan synthase-like 9, atgsl9,
gsl09, glucan synthase-like 9		 0.61 0.34 -0.31
36 AT3G25910 Protein of unknown function (DUF1644) -0.61 0.31 -0.31
37 AT5G46140 Protein of unknown function (DUF295) 0.6 0.32 -0.32
38 AT3G44340 clone eighty-four clone eighty-four 0.6 0.33 -0.32
39 AT1G24240 Ribosomal protein L19 family protein -0.6 0.3 -0.34
40 AT5G19380 CRT (chloroquine-resistance transporter)-like transporter 1 CRT (chloroquine-resistance
transporter)-like transporter 1		 0.6 0.31 -0.31
41 AT1G13200 F-box and associated interaction domains-containing protein 0.6 0.31 -0.32
42 AT2G35550 basic pentacysteine 7 BASIC PENTACYSTEINE 7, BBR, basic
pentacysteine 7		 0.6 0.31 -0.32
43 AT3G53090 ubiquitin-protein ligase 7 ubiquitin-protein ligase 7 0.59 0.32 -0.3
44 AT2G36980 Tetratricopeptide repeat (TPR)-like superfamily protein 0.59 0.34 -0.31
45 AT3G61390 RING/U-box superfamily protein 0.59 0.34 -0.34
46 AT3G20040 Hexokinase ATHXK4, HEXOKINASE-LIKE 2 0.59 0.31 -0.32
47 AT4G01210 glycosyl transferase family 1 protein 0.59 0.32 -0.32
48 AT3G03980 NAD(P)-binding Rossmann-fold superfamily protein -0.59 0.32 -0.32
49 AT4G38760 Protein of unknown function (DUF3414) 0.59 0.32 -0.3
50 AT2G39400 alpha/beta-Hydrolases superfamily protein -0.59 0.33 -0.31
51 AT1G09520 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, PHD-type, conserved site
(InterPro:IPR019786); BEST Arabidopsis thaliana protein
match is: PHD finger family protein (TAIR:AT3G17460.1); Has
56 Blast hits to 56 proteins in 17 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 -0.59 0.31 -0.31
52 AT3G03810 O-fucosyltransferase family protein embryo sac development arrest 30 0.59 0.3 -0.32
53 AT3G61530 Phosphoenolpyruvate carboxylase family protein PANB2 -0.59 0.32 -0.32
54 AT1G12720 transposable element gene 0.59 0.3 -0.31
55 AT5G16110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast
hits to 133 proteins in 18 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.32 -0.34
56 AT2G32990 glycosyl hydrolase 9B8 glycosyl hydrolase 9B8, glycosyl
hydrolase 9B8		 0.58 0.31 -0.34
57 AT1G27650 U2 snRNP auxiliary factor small subunit, putative ATU2AF35A -0.58 0.31 -0.31
58 AT5G18500 Protein kinase superfamily protein 0.58 0.3 -0.33
59 AT4G22250 RING/U-box superfamily protein -0.58 0.32 -0.32
60 AT5G14670 ADP-ribosylation factor A1B ADP-ribosylation factor A1B,
ADP-ribosylation factor A1B		 0.58 0.29 -0.32
61 AT5G51030 NAD(P)-binding Rossmann-fold superfamily protein 0.58 0.32 -0.29
62 AT1G06540 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G30930.1); Has 16 Blast hits
to 16 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.33 -0.3
63 AT5G37370 PRP38 family protein ATSRL1 0.58 0.31 -0.31
64 AT1G54370 sodium hydrogen exchanger 5 NA+/H+ ANTIPORTER 5, sodium
hydrogen exchanger 5		 0.58 0.31 -0.3
65 AT5G02150 Fes1C Fes1C -0.57 0.31 -0.32
66 AT5G37180 sucrose synthase 5 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 5, sucrose synthase 5		 0.57 0.31 -0.3
67 AT1G48360 zinc ion binding;nucleic acid binding;hydrolases, acting on
acid anhydrides, in phosphorus-containing anhydrides		 0.57 0.31 -0.32
68 AT1G22990 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 22		 -0.57 0.29 -0.29
69 AT2G29340 NAD-dependent epimerase/dehydratase family protein -0.57 0.32 -0.32
70 AT5G14390 alpha/beta-Hydrolases superfamily protein -0.57 0.32 -0.31
71 AT3G60850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 11 growth stages; Has 42
Blast hits to 42 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 37; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 -0.57 0.3 -0.28
72 AT3G29220 transposable element gene 0.57 0.31 -0.3
73 AT1G09575 Protein of unknown function (DUF607) -0.57 0.3 -0.3
74 AT3G59270 FBD-like domain family protein 0.57 0.31 -0.3
75 AT3G54230 suppressor of abi3-5 suppressor of abi3-5 0.57 0.32 -0.32
76 AT5G09360 laccase 14 laccase 14 0.57 0.29 -0.32
77 AT2G31760 RING/U-box superfamily protein ARIADNE 10, ARABIDOPSIS ARIADNE 10 0.57 0.32 -0.31
78 AT5G59070 UDP-Glycosyltransferase superfamily protein -0.57 0.32 -0.31
79 AT3G24480 Leucine-rich repeat (LRR) family protein 0.57 0.32 -0.32
80 AT5G59060 BEST Arabidopsis thaliana protein match is: RNA-directed
DNA polymerase (reverse transcriptase)-related family
protein (TAIR:AT5G18880.1); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.57 0.3 -0.32
81 AT4G36000 Pathogenesis-related thaumatin superfamily protein -0.57 0.31 -0.32
82 AT5G04890 HSP20-like chaperones superfamily protein RESTRICTED TEV MOVEMENT 2 0.57 0.31 -0.33
83 AT4G25950 vacuolar ATP synthase G3 vacuolar ATP synthase G3 0.57 0.35 -0.32
84 AT2G43150 Proline-rich extensin-like family protein 0.57 0.33 -0.32
85 AT4G10510 Subtilase family protein 0.56 0.32 -0.32
86 AT1G67100 LOB domain-containing protein 40 LOB domain-containing protein 40 -0.56 0.32 -0.34
87 AT5G44510 target of AVRB operation1 target of AVRB operation1 0.56 0.31 -0.36
88 AT4G32970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32960.1); Has 552 Blast hits
to 489 proteins in 85 species: Archae - 4; Bacteria - 14;
Metazoa - 187; Fungi - 12; Plants - 225; Viruses - 0; Other
Eukaryotes - 110 (source: NCBI BLink).		 0.56 0.31 -0.3
89 AT1G33350 Pentatricopeptide repeat (PPR) superfamily protein 0.56 0.33 -0.32
90 AT3G22910 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.56 0.31 -0.3
91 AT5G20330 beta-1,3-glucanase 4 beta-1,3-glucanase 4 0.56 0.31 -0.32
92 AT4G12040 A20/AN1-like zinc finger family protein AtSAP7, stress-associated protein
7		 -0.56 0.3 -0.31
93 AT1G33430 Galactosyltransferase family protein 0.56 0.33 -0.28
94 AT1G35513 pseudogene of isochorismate synthase-related /
isochorismate mutase-related		 0.56 0.34 -0.32
95 AT5G12100 pentatricopeptide (PPR) repeat-containing protein 0.55 0.34 -0.31
96 AT2G21230 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.55 0.31 -0.34
97 AT5G27670 histone H2A 7 histone H2A 7 -0.55 0.33 -0.32
98 AT1G28340 receptor like protein 4 receptor like protein 4, receptor
like protein 4		 0.55 0.32 -0.32
99 AT1G44414 unknown protein; Has 29 Blast hits to 29 proteins in 12
species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.55 0.3 -0.32
100 AT4G00760 pseudo-response regulator 8 pseudo-response regulator 8,
PSEUDO-RESPONSE REGULATOR 8		 0.55 0.31 -0.3
101 AT1G75550 glycine-rich protein 0.55 0.3 -0.31
102 AT3G47630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325
Blast hits to 325 proteins in 172 species: Archae - 0;
Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43;
Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).		 -0.55 0.31 -0.34
103 AT1G33060 NAC 014 NAC 014, NAC 014 -0.55 0.31 -0.31
104 AT5G25210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.55 0.33 -0.32
105 AT3G50500 SNF1-related protein kinase 2.2 SNF1-RELATED PROTEIN KINASE 2-2,
SNF1-related protein kinase 2.2,
SNF1-RELATED PROTEIN KINASE 2-2,
SRK2D		 -0.55 0.32 -0.33
106 AT5G05950 maternal effect embryo arrest 60 maternal effect embryo arrest 60 -0.55 0.32 -0.33
107 AT5G25190 Integrase-type DNA-binding superfamily protein ethylene and salt inducible 3 -0.54 0.32 -0.31
108 AT3G18030 HAL3-like protein A ATHAL3, ARABIDOPSIS THALIANA
HAL3-LIKE PROTEIN A, HALOTOLERANCE
DETERMINANT 3, HAL3-like protein A		 -0.54 0.33 -0.32
109 AT3G23030 indole-3-acetic acid inducible 2 indole-3-acetic acid inducible 2 -0.54 0.3 -0.33
110 AT5G51800 Protein kinase superfamily protein -0.54 0.32 -0.31
111 AT2G26870 non-specific phospholipase C2 non-specific phospholipase C2 -0.54 0.31 -0.34
112 AT4G24210 F-box family protein SLEEPY1 -0.54 0.34 -0.28
113 AT5G39070 transposable element gene -0.53 0.33 -0.33
114 AT5G42190 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family
protein		 Arabidopsis SKP-like 2, SKP1B -0.53 0.31 -0.37
115 AT1G49350 pfkB-like carbohydrate kinase family protein -0.53 0.32 -0.34
116 AT4G00231 ARM repeat superfamily protein maternal effect embryo arrest 50 -0.53 0.31 -0.32
117 AT4G04530 transposable element gene -0.53 0.32 -0.3
118 AT2G16870 Disease resistance protein (TIR-NBS-LRR class) family -0.53 0.31 -0.33
119 AT5G43480 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.53 0.32 -0.32
120 AT4G34970 actin depolymerizing factor 9 actin depolymerizing factor 9 -0.53 0.32 -0.32
121 AT3G54310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G38430.1); Has 44 Blast hits
to 41 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.32 -0.32
122 AT3G17590 transcription regulatory protein SNF5, putative (BSH) BUSHY GROWTH, CHE1 -0.52 0.34 -0.29
123 AT2G40970 Homeodomain-like superfamily protein MYBC1 -0.52 0.31 -0.32
124 AT1G34090 transposable element gene -0.5 0.35 -0.33
125 AT2G24410 BEST Arabidopsis thaliana protein match is: SMAD/FHA
domain-containing protein (TAIR:AT3G20550.1); Has 194
Blast hits to 194 proteins in 92 species: Archae - 0;
Bacteria - 0; Metazoa - 118; Fungi - 33; Plants - 30;
Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).		 -0.5 0.31 -0.32
126 AT4G26400 RING/U-box superfamily protein -0.5 0.32 -0.31
127 AT3G28790 Protein of unknown function (DUF1216) -0.5 0.32 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
128 C0096 Gluconic acid - D-Gluconate - 0.61 0.46 -0.47 C0096