AT3G04200 : -
Query Information
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AGICode AT3G04200
Description RmlC-like cupins superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G04200 RmlC-like cupins superfamily protein 1 0.31 -0.31
2 AT1G19060 Protein of unknown function (DUF626) 0.77 0.34 -0.35
3 AT5G11360 Interleukin-1 receptor-associated kinase 4 protein 0.75 0.31 -0.32
4 AT5G43800 transposable element gene 0.74 0.32 -0.3
5 AT1G76290 AMP-dependent synthetase and ligase family protein 0.74 0.32 -0.31
6 AT3G17290 transposable element gene 0.73 0.32 -0.33
7 AT2G20850 STRUBBELIG-receptor family 1 STRUBBELIG-receptor family 1 0.73 0.32 -0.3
8 AT2G07000 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.72 0.32 -0.29
9 AT4G02170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.32 -0.31
10 AT3G16060 ATP binding microtubule motor family protein 0.72 0.32 -0.33
11 AT3G21175 ZIM-like 1 GATA TRANSCRIPTION FACTOR 24,
TIFY2B, ZIM LIKE 1, ZIM-like 1		 -0.71 0.32 -0.33
12 AT2G15880 Leucine-rich repeat (LRR) family protein -0.7 0.29 -0.31
13 AT5G38950 RmlC-like cupins superfamily protein 0.7 0.31 -0.31
14 AT3G49950 GRAS family transcription factor 0.7 0.32 -0.34
15 AT4G13020 Protein kinase superfamily protein MHK 0.7 0.3 -0.34
16 AT1G70920 homeobox-leucine zipper protein 18 homeobox-leucine zipper protein
18, homeobox-leucine zipper
protein 18		 -0.69 0.32 -0.31
17 AT4G16500 Cystatin/monellin superfamily protein -0.69 0.31 -0.32
18 AT4G13790 SAUR-like auxin-responsive protein family -0.68 0.32 -0.34
19 AT3G19880 F-box and associated interaction domains-containing protein 0.68 0.32 -0.34
20 AT1G13260 related to ABI3/VP1 1 ETHYLENE RESPONSE DNA BINDING
FACTOR 4, related to ABI3/VP1 1		 -0.68 0.32 -0.31
21 AT3G25560 NSP-interacting kinase 2 NSP-interacting kinase 2 0.68 0.31 -0.31
22 AT3G18560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits
to 95 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.33 -0.31
23 AT3G21810 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.68 0.32 -0.31
24 AT2G30090 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.68 0.3 -0.32
25 AT4G39930 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.33 -0.33
26 AT5G02410 DIE2/ALG10 family homolog of yeast ALG10 0.67 0.32 -0.32
27 AT3G19950 RING/U-box superfamily protein -0.67 0.32 -0.3
28 AT5G62910 RING/U-box superfamily protein -0.67 0.32 -0.29
29 AT1G18510 tetraspanin 16 tetraspanin 16 0.67 0.29 -0.32
30 AT4G33440 Pectin lyase-like superfamily protein 0.67 0.3 -0.29
31 AT1G02320 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.67 0.32 -0.32
32 AT1G66660 Protein with RING/U-box and TRAF-like domains -0.67 0.32 -0.33
33 AT2G26990 proteasome family protein ATCSN2, CONSTITUTIVE
PHOTOMORPHOGENIC 12, CSN2, FUSCA
12		 -0.67 0.31 -0.3
34 AT2G22570 nicotinamidase 1 A. THALIANA NICOTINAMIDASE 1,
nicotinamidase 1		 -0.67 0.34 -0.29
35 AT2G22880 VQ motif-containing protein -0.67 0.33 -0.33
36 AT3G44740 Class II aaRS and biotin synthetases superfamily protein 0.67 0.32 -0.33
37 AT5G38670 Galactose oxidase/kelch repeat superfamily protein -0.67 0.34 -0.32
38 AT4G28395 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 ANTHER 7, ARABIDOPSIS THALIANA
ANTHER 7		 0.67 0.32 -0.32
39 AT1G68750 phosphoenolpyruvate carboxylase 4 phosphoenolpyruvate carboxylase 4,
phosphoenolpyruvate carboxylase 4		 0.66 0.3 -0.34
40 AT4G14180 putative recombination initiation defect 1 putative recombination initiation
defect 1, putative recombination
initiation defect 1		 0.65 0.33 -0.31
41 AT3G45440 Concanavalin A-like lectin protein kinase family protein 0.65 0.33 -0.31
42 AT1G63960 Copper transport protein family 0.65 0.29 -0.3
43 AT3G17360 phragmoplast orienting kinesin 1 phragmoplast orienting kinesin 1 0.65 0.32 -0.33
44 AT3G03410 EF hand calcium-binding protein family -0.65 0.32 -0.33
45 AT4G34560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits
to 66 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.33
46 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.65 0.31 -0.31
47 AT3G53610 RAB GTPase homolog 8 RAB GTPase homolog 8, AtRab8B,
AtRABE1a, RAB GTPase homolog 8		 -0.64 0.34 -0.33
48 AT2G06840 transposable element gene -0.64 0.31 -0.31
49 AT3G20860 NIMA-related kinase 5 NIMA-related kinase 5,
NIMA-related kinase 5		 0.64 0.32 -0.31
50 AT2G26630 transposable element gene 0.64 0.33 -0.3
51 AT5G65710 HAESA-like 2 HAESA-like 2 0.64 0.33 -0.31
52 AT3G22360 alternative oxidase 1B alternative oxidase 1B -0.64 0.32 -0.33
53 AT1G74160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits
to 2217 proteins in 314 species: Archae - 0; Bacteria -
264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses -
34; Other Eukaryotes - 1149 (source: NCBI BLink).		 0.64 0.3 -0.31
54 AT1G34080 transposable element gene 0.64 0.31 -0.3
55 AT5G54490 pinoid-binding protein 1 pinoid-binding protein 1 -0.64 0.3 -0.29
56 AT3G60260 ELMO/CED-12 family protein -0.64 0.32 -0.33
57 AT2G06640 transposable element gene -0.64 0.32 -0.3
58 AT4G10850 Nodulin MtN3 family protein AtSWEET7, SWEET7 0.64 0.3 -0.32
59 AT5G20880 transposable element gene -0.63 0.33 -0.27
60 AT2G41580 transposable element gene -0.63 0.33 -0.32
61 AT1G36910 transposable element gene -0.63 0.31 -0.32
62 AT2G18190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.32 -0.32
63 AT3G20620 F-box family protein-related 0.63 0.33 -0.31
64 AT5G40260 Nodulin MtN3 family protein AtSWEET8, SWEET8 0.63 0.3 -0.32
65 AT5G51480 SKU5 similar 2 SKU5 similar 2 -0.63 0.33 -0.31
66 AT4G03480 Ankyrin repeat family protein -0.63 0.33 -0.32
67 AT3G29690 HXXXD-type acyl-transferase family protein -0.63 0.31 -0.33
68 AT4G13130 Cysteine/Histidine-rich C1 domain family protein -0.63 0.3 -0.31
69 AT4G00340 receptor-like protein kinase 4 receptor-like protein kinase 4 0.63 0.3 -0.31
70 AT1G12260 NAC 007 NAC 007, EMBRYO DEFECTIVE 2749,
NAC 007, VASCULAR RELATED
NAC-DOMAIN PROTEIN 4		 0.63 0.3 -0.29
71 AT5G10880 tRNA synthetase-related / tRNA ligase-related 0.63 0.3 -0.31
72 AT2G35635 ubiquitin 7 RELATED TO UBIQUITIN 2, ubiquitin
7		 -0.63 0.32 -0.3
73 AT5G38770 glutamine dumper 7 glutamine dumper 7, glutamine
dumper 7		 0.63 0.32 -0.32
74 AT1G75160 Protein of unknown function (DUF620) -0.62 0.32 -0.34
75 AT2G32360 Ubiquitin-like superfamily protein 0.62 0.32 -0.32
76 AT3G05500 Rubber elongation factor protein (REF) -0.62 0.34 -0.31
77 AT1G54140 TATA binding protein associated factor 21kDa subunit TBP-ASSOCIATED FACTOR 9, TATA
binding protein associated factor
21kDa subunit		 -0.62 0.31 -0.32
78 AT3G20020 protein arginine methyltransferase 6 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 6,
protein arginine methyltransferase
6		 0.62 0.34 -0.32
79 AT1G28560 snRNA activating complex family protein SHOOT REDIFFERENTIATION DEFECTIVE
2		 0.62 0.34 -0.32
80 AT3G62330 Zinc knuckle (CCHC-type) family protein 0.62 0.34 -0.31
81 AT1G23610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23640.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.62 0.32 -0.32
82 AT1G34480 Cysteine/Histidine-rich C1 domain family protein 0.62 0.31 -0.32
83 AT4G10820 F-box family protein 0.62 0.28 -0.32
84 AT4G04970 glucan synthase-like 1 GLUCAN SYNTHASE LIKE 1, GLUCAN
SYNTHASE LIKE-1, GSL01, glucan
synthase-like 1		 0.62 0.32 -0.31
85 AT5G66960 Prolyl oligopeptidase family protein 0.62 0.32 -0.31
86 AT3G51780 BCL-2-associated athanogene 4 BCL-2-associated athanogene 4,
BCL-2-associated athanogene 4		 -0.62 0.31 -0.31
87 AT3G46360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44755.1); Has 4 Blast hits to
4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.62 0.31 -0.34
88 AT1G21360 glycolipid transfer protein 2 glycolipid transfer protein 2 -0.62 0.32 -0.34
89 AT3G15060 RAB GTPase homolog A1G RAB GTPase homolog A1G, RAB GTPase
homolog A1G		 -0.62 0.33 -0.32
90 AT2G25420 transducin family protein / WD-40 repeat family protein 0.62 0.32 -0.32
91 AT1G18970 germin-like protein 4 germin-like protein 4 -0.62 0.35 -0.3
92 AT4G13450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.61 0.34 -0.32
93 AT4G18500 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.3 -0.32
94 AT4G08650 transposable element gene 0.61 0.3 -0.3
95 AT4G39610 Protein of unknown function, DUF617 -0.61 0.31 -0.32
96 AT3G42290 transposable element gene -0.61 0.32 -0.3
97 AT2G02700 Cysteine/Histidine-rich C1 domain family protein -0.61 0.31 -0.33
98 AT1G10980 Lung seven transmembrane receptor family protein 0.61 0.32 -0.35
99 AT5G58910 laccase 16 laccase 16 -0.61 0.34 -0.29
100 AT3G07400 lipase class 3 family protein 0.61 0.3 -0.3
101 AT1G61750 Receptor-like protein kinase-related family protein -0.61 0.32 -0.33
102 AT3G05490 ralf-like 22 ralf-like 22 -0.61 0.31 -0.33
103 AT4G37840 hexokinase-like 3 hexokinase-like 3 0.61 0.3 -0.3
104 AT4G25980 Peroxidase superfamily protein 0.61 0.29 -0.3
105 AT5G37610 Eukaryotic porin family protein 0.61 0.29 -0.3
106 AT1G77730 Pleckstrin homology (PH) domain superfamily protein 0.61 0.31 -0.28
107 AT1G71697 choline kinase 1 choline kinase 1, CHOLINE KINASE,
choline kinase 1		 -0.61 0.3 -0.31
108 AT3G12950 Trypsin family protein 0.6 0.32 -0.32
109 AT1G43680 BEST Arabidopsis thaliana protein match is: nucleic acid
binding;zinc ion binding (TAIR:AT5G36228.1); Has 59 Blast
hits to 57 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.3 -0.3
110 AT5G61360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G07730.1); Has 20 Blast hits
to 20 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 -0.6 0.31 -0.31
111 AT1G73970 unknown protein; Has 34 Blast hits to 33 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.6 0.31 -0.34
112 AT3G24680 transposable element gene 0.6 0.33 -0.32
113 AT4G21110 G10 family protein -0.6 0.3 -0.33
114 AT5G53290 cytokinin response factor 3 cytokinin response factor 3 -0.6 0.33 -0.32
115 AT5G48270 Plant protein of unknown function (DUF868) 0.6 0.3 -0.3
116 AT4G32270 Ubiquitin-like superfamily protein 0.6 0.31 -0.33
117 AT1G18610 Galactose oxidase/kelch repeat superfamily protein 0.6 0.3 -0.31
118 AT3G61640 arabinogalactan protein 20 arabinogalactan protein 20,
Arabinogalactan protein 20		 -0.6 0.3 -0.31
119 AT4G33370 DEA(D/H)-box RNA helicase family protein -0.6 0.31 -0.3
120 AT1G31050 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.6 0.31 -0.33
121 AT2G37050 Leucine-rich repeat protein kinase family protein 0.6 0.3 -0.32
122 AT5G06320 NDR1/HIN1-like 3 NDR1/HIN1-like 3 -0.6 0.31 -0.31
123 AT5G14930 senescence-associated gene 101 senescence-associated gene 101 -0.6 0.3 -0.3
124 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.6 0.33 -0.31
125 AT2G23740 nucleic acid binding;sequence-specific DNA binding
transcription factors;zinc ion binding		 0.6 0.3 -0.31
126 AT3G56520 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 -0.6 0.33 -0.33
127 AT3G26140 Cellulase (glycosyl hydrolase family 5) protein 0.6 0.33 -0.31
128 AT5G06265 hyaluronan mediated motility receptor-related 0.6 0.3 -0.32
129 AT2G10020 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.31 -0.33
130 AT1G28270 ralf-like 4 ralf-like 4 0.6 0.3 -0.33
131 AT2G40620 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.59 0.32 -0.31
132 AT1G21010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.32 -0.31
133 AT3G21400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; Has 29 Blast hits to 29 proteins in 12 species:
Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants -
27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.33 -0.32
134 AT4G25610 C2H2-like zinc finger protein -0.59 0.33 -0.32
135 AT5G48655 RING/U-box superfamily protein -0.59 0.3 -0.32
136 AT1G05990 EF hand calcium-binding protein family ROOT HAIR SPECIFIC 1 -0.58 0.3 -0.32
137 AT1G53345 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant
structures; EXPRESSED DURING: 4 anthesis, F mature embryo
stage, petal differentiation and expansion stage, E
expanded cotyledon stage, D bilateral stage; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G09580.1); Has 201 Blast hits to 201 proteins in
75 species: Archae - 6; Bacteria - 102; Metazoa - 2; Fungi
- 0; Plants - 47; Viruses - 7; Other Eukaryotes - 37
(source: NCBI BLink).		 -0.58 0.33 -0.3
138 AT5G25500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.58 0.31 -0.32
139 AT4G17490 ethylene responsive element binding factor 6 ethylene responsive element
binding factor 6, ERF-6-6,
ethylene responsive element
binding factor 6		 -0.58 0.31 -0.3
140 AT3G02270 Trimeric LpxA-like enzyme -0.58 0.32 -0.31
141 AT5G42640 C2H2 and C2HC zinc fingers superfamily protein -0.58 0.31 -0.3
142 AT3G45500 BEST Arabidopsis thaliana protein match is: RING/U-box
protein with C6HC-type zinc finger (TAIR:AT3G45580.1); Has
48 Blast hits to 46 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.31 -0.31
143 AT2G22630 AGAMOUS-like 17 AGAMOUS-like 17 -0.58 0.31 -0.31
144 AT5G30520 unknown protein; Has 50 Blast hits to 50 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.32 -0.32