AT3G04150 : -
Query Information
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AGICode AT3G04150
Description RmlC-like cupins superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G04150 RmlC-like cupins superfamily protein 1 0.3 -0.32
2 AT4G10280 RmlC-like cupins superfamily protein -0.7 0.31 -0.32
3 AT3G48425 DNAse I-like superfamily protein -0.66 0.33 -0.3
4 AT5G49140 Disease resistance protein (TIR-NBS-LRR class) family -0.66 0.32 -0.32
5 AT3G19780 LOCATED IN: endomembrane system; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF179
(InterPro:IPR003774), Thioredoxin fold
(InterPro:IPR012335), Thioredoxin-like fold
(InterPro:IPR012336); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF179)
(TAIR:AT1G33780.1); Has 74 Blast hits to 72 proteins in 32
species: Archae - 0; Bacteria - 24; Metazoa - 11; Fungi -
3; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.65 0.32 -0.31
6 AT3G42820 transposable element gene 0.65 0.31 -0.33
7 AT5G27050 AGAMOUS-like 101 AGAMOUS-like 101 0.64 0.29 -0.32
8 AT5G22910 cation/H+ exchanger 9 ARABIDOPSIS THALIANA CATION/H+
EXCHANGER 9, cation/H+ exchanger
9		 0.64 0.33 -0.29
9 AT4G15040 Subtilisin-like serine endopeptidase family protein 0.64 0.33 -0.32
10 AT2G15600 transposable element gene -0.64 0.32 -0.31
11 AT1G30560 Major facilitator superfamily protein glycerol-3-phosphate permease 3,
glycerol-3-phosphate permease 3		 0.64 0.31 -0.28
12 AT1G12310 Calcium-binding EF-hand family protein -0.63 0.28 -0.33
13 AT3G16550 DEGP protease 12 DEGP protease 12 0.63 0.33 -0.31
14 AT1G76510 ARID/BRIGHT DNA-binding domain-containing protein -0.63 0.32 -0.3
15 AT3G16100 RAB GTPase homolog G3C ATRAB7D, RAB GTPase homolog G3C,
RAB GTPase homolog G3C		 -0.63 0.34 -0.32
16 AT1G78720 SecY protein transport family protein 0.62 0.33 -0.29
17 AT5G11050 myb domain protein 64 myb domain protein 64, myb domain
protein 64		 0.62 0.33 -0.33
18 AT3G32100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1 Blast hits to 1 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.31 -0.32
19 AT1G12720 transposable element gene 0.62 0.32 -0.31
20 AT1G17010 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.61 0.3 -0.32
21 AT1G30010 Intron maturase, type II family protein 0.61 0.32 -0.31
22 AT1G08860 Calcium-dependent phospholipid-binding Copine family
protein		 BONZAI 3 0.61 0.32 -0.3
23 AT5G25990 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
(TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.61 0.31 -0.31
24 AT5G45010 DSS1 homolog on chromosome V DSS1 homolog on chromosome V, DSS1
homolog on chromosome V		 -0.61 0.33 -0.31
25 AT5G57200 ENTH/ANTH/VHS superfamily protein 0.61 0.33 -0.3
26 AT1G55410 pseudogene, CHP-rich zinc finger protein, putative, similar
to putative CHP-rich zinc finger protein GB:CAB77744
GI:7268217 from (Arabidopsis thaliana)		 0.61 0.34 -0.28
27 AT2G04410 RPM1-interacting protein 4 (RIN4) family protein -0.6 0.31 -0.31
28 AT1G67450 F-box and associated interaction domains-containing protein 0.6 0.3 -0.31
29 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 0.59 0.32 -0.32
30 AT1G10000 Ribonuclease H-like superfamily protein 0.59 0.31 -0.31
31 AT2G01260 Protein of unknown function (DUF789) -0.59 0.32 -0.3
32 AT2G42310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G57785.1); Has 115 Blast hits
to 115 proteins in 48 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 44; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.29 -0.31
33 AT1G11740 ankyrin repeat family protein -0.59 0.3 -0.32
34 AT4G18593 dual specificity protein phosphatase-related -0.58 0.3 -0.31
35 AT1G36020 BEST Arabidopsis thaliana protein match is: DEAD/DEAH box
RNA helicase family protein (TAIR:AT1G35530.1); Has 18
Blast hits to 18 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.31 -0.32
36 AT5G35660 Glycine-rich protein family 0.58 0.32 -0.32
37 AT5G17970 Disease resistance protein (TIR-NBS-LRR class) family -0.58 0.29 -0.31
38 AT2G06190 transposable element gene 0.57 0.32 -0.32
39 AT5G40600 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G27420.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.57 0.32 -0.32
40 AT3G21590 Senescence/dehydration-associated protein-related -0.56 0.33 -0.3
41 AT5G18810 SC35-like splicing factor 28 SC35-like splicing factor 28,
SC35-like splicing factor 28		 -0.56 0.32 -0.3
42 AT3G19080 SWIB complex BAF60b domain-containing protein -0.56 0.32 -0.33
43 AT1G60540 pseudogene of the dynamin family Dynamin related protein 4B 0.56 0.33 -0.3
44 AT1G31620 unknown protein; Has 9 Blast hits to 9 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.56 0.31 -0.33
45 AT5G14380 arabinogalactan protein 6 arabinogalactan protein 6 0.56 0.29 -0.31
46 AT2G44590 DYNAMIN-like 1D DYNAMIN-like 1D, DYNAMIN-like 1D 0.55 0.3 -0.3
47 AT2G45640 SIN3 associated polypeptide P18 SIN3 ASSOCIATED POLYPEPTIDE 18,
SIN3 associated polypeptide P18		 -0.55 0.33 -0.31
48 AT1G06970 cation/hydrogen exchanger 14 ATCHX14, cation/hydrogen exchanger
14		 -0.55 0.32 -0.31
49 AT1G22010 unknown protein; Has 12 Blast hits to 12 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.32 -0.3
50 AT1G27550 F-box family protein -0.55 0.32 -0.29
51 AT1G55330 arabinogalactan protein 21 arabinogalactan protein 21,
ARABINOGALACTAN PROTEIN 21		 -0.54 0.31 -0.31
52 AT2G11370 transposable element gene 0.54 0.3 -0.31
53 AT3G18460 PLAC8 family protein 0.54 0.33 -0.32
54 AT3G11530 Vacuolar protein sorting 55 (VPS55) family protein -0.54 0.32 -0.31
55 AT5G64470 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 12 -0.54 0.33 -0.31
56 AT5G47770 farnesyl diphosphate synthase 1 farnesyl diphosphate synthase 1 -0.54 0.31 -0.3
57 AT5G43680 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.54 0.31 -0.31
58 AT5G57830 Protein of unknown function, DUF593 -0.53 0.32 -0.33
59 AT5G17400 endoplasmic reticulum-adenine nucleotide transporter 1 endoplasmic reticulum-adenine
nucleotide transporter 1		 -0.53 0.3 -0.3
60 AT5G40260 Nodulin MtN3 family protein AtSWEET8, SWEET8 0.53 0.33 -0.32
61 AT1G33710 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 -0.53 0.3 -0.32
62 AT1G76860 Small nuclear ribonucleoprotein family protein -0.53 0.32 -0.31
63 AT3G14490 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.53 0.33 -0.32
64 AT3G53650 Histone superfamily protein -0.52 0.31 -0.35
65 AT3G14640 cytochrome P450, family 72, subfamily A, polypeptide 10 cytochrome P450, family 72,
subfamily A, polypeptide 10		 0.52 0.29 -0.32
66 AT3G17590 transcription regulatory protein SNF5, putative (BSH) BUSHY GROWTH, CHE1 -0.52 0.3 -0.32
67 AT1G44510 transposable element gene -0.52 0.31 -0.32
68 AT2G29920 unknown protein; Has 14 Blast hits to 9 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink).		 0.51 0.32 -0.3
69 AT4G18870 E2F/DP family winged-helix DNA-binding domain 0.51 0.31 -0.29
70 AT5G58830 Subtilisin-like serine endopeptidase family protein 0.51 0.31 -0.29
71 AT4G26050 plant intracellular ras group-related LRR 8 plant intracellular ras
group-related LRR 8		 0.51 0.31 -0.32
72 AT1G56030 RING/U-box superfamily protein -0.5 0.32 -0.32
73 AT4G36730 G-box binding factor 1 G-box binding factor 1 -0.5 0.31 -0.32
74 AT2G31370 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.5 0.31 -0.32
75 AT2G26460 RED family protein SUPPRESSORS OF MEC-8 AND UNC-52 2 -0.5 0.32 -0.32
76 AT4G08450 Disease resistance protein (TIR-NBS-LRR class) family -0.5 0.33 -0.32
77 AT3G51040 RTE1-homolog RTE1-homolog -0.5 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
78 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate -0.8 0.46 -0.46 C0136
79 C0131 Kaempferol-3-O-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside Kaempferol-3-glucoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.75 0.45 -0.47 C0131
80 C0216 Proline L-Proline L-Proline proline degradation II,
arginine degradation VI (arginase 2 pathway),
L-Ndelta-acetylornithine biosynthesis,
tRNA charging,
citrulline biosynthesis,
proline biosynthesis III 		0.57 0.3 -0.32 C0216
81 C0061 Aspartic acid L-Aspartic acid L-Aspartate purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging,
indole-3-acetyl-amino acid biosynthesis,
citrulline-nitric oxide cycle,
asparagine degradation I,
cyanide detoxification II,
asparagine biosynthesis I,
asparagine biosynthesis III (tRNA-dependent),
arginine biosynthesis I,
inosine-5'-phosphate biosynthesis II,
uridine-5'-phosphate biosynthesis,
aspartate biosynthesis,
homoserine biosynthesis,
lysine biosynthesis VI,
aspartate degradation II,
urea cycle,
purine nucleotides de novo biosynthesis II,
NAD biosynthesis I (from aspartate),
IAA degradation IV,
arginine biosynthesis II (acetyl cycle) 		0.53 0.31 -0.34 C0061