AT3G02780 : ATISOPENTENYL DIPHOSPHE ISOMERASE 2
Query Information
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AGICode AT3G02780
Description isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G02780 isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase 2		 ATISOPENTENYL DIPHOSPHE ISOMERASE
2, IPIAT1, isopentenyl
pyrophosphate:dimethylallyl
pyrophosphate isomerase 2		 1 0.3 -0.32
2 AT4G34700 LYR family of Fe/S cluster biogenesis protein AtCIB22, B22 subunit of eukaryotic
mitochondrial Complex I		 0.83 0.33 -0.33
3 AT4G02620 vacuolar ATPase subunit F family protein 0.82 0.3 -0.31
4 AT1G14450 NADH dehydrogenase (ubiquinone)s 0.8 0.32 -0.29
5 AT3G10920 manganese superoxide dismutase 1 ARABIDOPSIS MANGANESE SUPEROXIDE
DISMUTASE 1, MATERNAL EFFECT
EMBRYO ARREST 33, manganese
superoxide dismutase 1		 0.8 0.3 -0.31
6 AT1G06200 Peptidase S24/S26A/S26B/S26C family protein 0.79 0.32 -0.31
7 AT1G08480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane, plastid, vacuole; EXPRESSED
IN: 27 plant structures; EXPRESSED DURING: 15 growth
stages; Has 39 Blast hits to 39 proteins in 13 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 succinate dehydrogenase 6 0.79 0.31 -0.34
8 AT3G10860 Cytochrome b-c1 complex, subunit 8 protein 0.79 0.31 -0.35
9 AT5G16440 isopentenyl diphosphate isomerase 1 isopentenyl diphosphate isomerase
1		 0.78 0.31 -0.3
10 AT5G42980 thioredoxin 3 thioredoxin H-type 3, thioredoxin
3, ATTRXH3, thioredoxin 3,
THIOREDOXIN H3		 0.78 0.32 -0.31
11 AT2G35010 thioredoxin O1 thioredoxin O1, thioredoxin O1 0.77 0.32 -0.33
12 AT3G52730 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family
protein		 0.77 0.31 -0.31
13 AT1G27530 CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating
enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold
modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269
Blast hits to 269 proteins in 110 species: Archae - 0;
Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).		 0.77 0.33 -0.31
14 AT5G47890 NADH-ubiquinone oxidoreductase B8 subunit, putative 0.77 0.31 -0.33
15 AT5G07220 BCL-2-associated athanogene 3 BCL-2-associated athanogene 3,
BCL-2-associated athanogene 3		 0.77 0.33 -0.29
16 AT2G18040 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 peptidylprolyl cis/trans
isomerase, NIMA-interacting 1		 0.77 0.31 -0.33
17 AT3G62790 NADH-ubiquinone oxidoreductase-related 0.76 0.29 -0.31
18 AT2G25610 ATPase, F0/V0 complex, subunit C protein 0.76 0.31 -0.3
19 AT2G20820 unknown protein; Has 44 Blast hits to 44 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.76 0.29 -0.31
20 AT2G39780 ribonuclease 2 ribonuclease 2 0.76 0.32 -0.32
21 AT3G61690 nucleotidyltransferases -0.75 0.31 -0.34
22 AT3G43520 Transmembrane proteins 14C 0.75 0.3 -0.32
23 AT2G40960 Single-stranded nucleic acid binding R3H protein -0.75 0.32 -0.3
24 AT4G37830 cytochrome c oxidase-related 0.75 0.31 -0.32
25 AT3G03270 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.75 0.33 -0.31
26 AT3G03100 NADH:ubiquinone oxidoreductase, 17.2kDa subunit 0.75 0.3 -0.31
27 AT5G01730 SCAR family protein 4 ATSCAR4, SCAR family protein 4,
WAVE3		 -0.74 0.33 -0.33
28 AT4G14970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 6 growth stages; Has 257 Blast hits to 164 proteins
in 70 species: Archae - 0; Bacteria - 4; Metazoa - 189;
Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 -0.74 0.33 -0.32
29 AT3G12290 Amino acid dehydrogenase family protein 0.74 0.32 -0.33
30 AT3G28480 Oxoglutarate/iron-dependent oxygenase 0.74 0.33 -0.3
31 AT2G40070 BEST Arabidopsis thaliana protein match is: proline-rich
family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.74 0.33 -0.32
32 AT1G10700 phosphoribosyl pyrophosphate (PRPP) synthase 3 phosphoribosyl pyrophosphate
(PRPP) synthase 3		 0.73 0.31 -0.33
33 AT2G20360 NAD(P)-binding Rossmann-fold superfamily protein 0.73 0.28 -0.33
34 AT5G10800 RNA recognition motif (RRM)-containing protein -0.73 0.32 -0.29
35 AT3G17710 F-box and associated interaction domains-containing protein 0.73 0.3 -0.31
36 AT5G20090 Uncharacterised protein family (UPF0041) 0.73 0.31 -0.32
37 AT3G19300 Protein kinase superfamily protein -0.73 0.31 -0.3
38 AT3G51480 glutamate receptor 3.6 glutamate receptor 3.6, GLR3.6,
glutamate receptor 3.6		 -0.73 0.33 -0.34
39 AT2G44525 Protein of unknown function (DUF498/DUF598) 0.72 0.3 -0.31
40 AT3G20920 translocation protein-related 0.72 0.32 -0.29
41 AT2G02050 NADH-ubiquinone oxidoreductase B18 subunit, putative 0.72 0.31 -0.31
42 AT1G18680 HNH endonuclease domain-containing protein 0.72 0.32 -0.32
43 AT5G64350 FK506-binding protein 12 ARABIDOPSIS THALIANA FK506-BINDING
PROTEIN 12, FK506-binding protein
12, FKP12		 0.72 0.32 -0.3
44 AT5G51510 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1352 (InterPro:IPR009787); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.72 0.31 -0.3
45 AT1G23960 Protein of unknown function (DUF626) 0.72 0.31 -0.31
46 AT1G16680 Chaperone DnaJ-domain superfamily protein -0.71 0.3 -0.29
47 AT1G79230 mercaptopyruvate sulfurtransferase 1 ATMST1, ARABIDOPSIS THALIANA
RHODANESE HOMOLOGUE 1,
mercaptopyruvate sulfurtransferase
1, SULFURTRANSFERASE 1, STR1		 0.71 0.3 -0.33
48 AT5G49980 auxin F-box protein 5 auxin F-box protein 5 -0.71 0.31 -0.31
49 AT5G64180 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.71 0.33 -0.33
50 AT5G06710 homeobox from Arabidopsis thaliana homeobox from Arabidopsis thaliana -0.71 0.34 -0.33
51 AT4G32470 Cytochrome bd ubiquinol oxidase, 14kDa subunit 0.71 0.32 -0.33
52 AT1G02110 Protein of unknown function (DUF630 and DUF632) -0.71 0.3 -0.34
53 AT2G29960 cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
5, CYCLOPHILIN 19-4, cyclophilin 5		 0.71 0.31 -0.33
54 AT5G52840 NADH-ubiquinone oxidoreductase-related 0.71 0.34 -0.32
55 AT5G47740 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.7 0.33 -0.31
56 AT3G52300 ATP synthase D chain, mitochondrial ATP synthase D chain,
mitochondrial		 0.7 0.32 -0.33
57 AT1G69440 Argonaute family protein ARGONAUTE7, ZIPPY -0.7 0.31 -0.32
58 AT3G13410 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G55546.1); Has 49 Blast hits to 49 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.7 0.31 -0.31
59 AT1G35670 calcium-dependent protein kinase 2 calcium-dependent protein kinase
2, ATCPK11, calcium-dependent
protein kinase 2, CPK11		 0.7 0.33 -0.32
60 AT2G02510 NADH dehydrogenase (ubiquinone)s 0.7 0.32 -0.32
61 AT2G33220 GRIM-19 protein 0.7 0.3 -0.34
62 AT3G53240 receptor like protein 45 receptor like protein 45, receptor
like protein 45		 -0.69 0.29 -0.31
63 AT1G26150 proline-rich extensin-like receptor kinase 10 proline-rich extensin-like
receptor kinase 10, proline-rich
extensin-like receptor kinase 10		 -0.69 0.31 -0.31
64 AT4G20150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane, mitochondrial respiratory
chain complex I, respiratory chain complex I; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.69 0.32 -0.33
65 AT4G26520 Aldolase superfamily protein -0.69 0.31 -0.32
66 AT5G55340 MBOAT (membrane bound O-acyl transferase) family protein -0.69 0.33 -0.33
67 AT5G11810 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.69 0.29 -0.32
68 AT1G27880 DEAD/DEAH box RNA helicase family protein -0.69 0.31 -0.33
69 AT4G09970 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18
plant structures; EXPRESSED DURING: 13 growth stages; Has
15 Blast hits to 15 proteins in 6 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 13; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.31 -0.31
70 AT1G71810 Protein kinase superfamily protein -0.68 0.32 -0.31
71 AT5G07880 synaptosomal-associated protein SNAP25-like 29 ARABIDOPSIS THALIANA
SYNAPTOSOMAL-ASSOCIATED PROTEIN
SNAP25-LIKE 29,
synaptosomal-associated protein
SNAP25-like 29		 -0.67 0.29 -0.31
72 AT2G42920 Pentatricopeptide repeat (PPR-like) superfamily protein -0.67 0.32 -0.32
73 AT1G13050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits
to 510 proteins in 88 species: Archae - 0; Bacteria - 23;
Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other
Eukaryotes - 29 (source: NCBI BLink).		 -0.66 0.29 -0.32
74 AT5G65460 kinesin like protein for actin based chloroplast movement 2 kinesin like protein for actin
based chloroplast movement 2,
kinesin CDKA ;1 associated 2		 -0.66 0.31 -0.31
75 AT5G34800 transposable element gene -0.66 0.3 -0.33
76 AT2G35110 transcription activators GNARLED, NCK-ASSOCIATED PROTEIN 1,
NAPP		 -0.66 0.31 -0.3
77 AT1G05160 cytochrome P450, family 88, subfamily A, polypeptide 3 ATKAO1, cytochrome P450, family
88, subfamily A, polypeptide 3,
ENT-KAURENOIC ACID OXYDASE 1		 -0.65 0.31 -0.28
78 AT5G06670 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.64 0.3 -0.32
79 AT1G70550 Protein of Unknown Function (DUF239) -0.64 0.31 -0.34
80 AT1G70895 CLAVATA3/ESR-RELATED 17 CLAVATA3/ESR-RELATED 17 -0.64 0.3 -0.33
81 AT3G60400 Mitochondrial transcription termination factor family
protein		 -0.63 0.33 -0.3
82 AT3G18100 myb domain protein 4r1 myb domain protein 4R1, myb domain
protein 4r1		 -0.63 0.3 -0.31
83 AT3G33530 Transducin family protein / WD-40 repeat family protein -0.63 0.31 -0.33
84 AT3G10180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.63 0.33 -0.34
85 AT5G55670 RNA-binding (RRM/RBD/RNP motifs) family protein -0.62 0.33 -0.32
86 AT3G05750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G26910.1); Has 2317
Blast hits to 1467 proteins in 247 species: Archae - 4;
Bacteria - 750; Metazoa - 557; Fungi - 182; Plants - 180;
Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).		 -0.62 0.3 -0.34
87 AT5G61070 histone deacetylase of the RPD3/HDA1 superfamily 18 A. THALIANA HISTONE DEACETYLASE OF
THE RPD3/HDA1 SUPERFAMILY 18,
histone deacetylase of the
RPD3/HDA1 superfamily 18		 -0.62 0.31 -0.33
88 AT4G38340 Plant regulator RWP-RK family protein -0.62 0.32 -0.31