AGICode | AT3G02790 |
Description | zinc finger (C2H2 type) family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G02790 | zinc finger (C2H2 type) family protein | 1 | 0.33 | -0.31 | |||
2 | AT3G02080 | Ribosomal protein S19e family protein | 0.85 | 0.32 | -0.31 | |||
3 | AT3G04920 | Ribosomal protein S24e family protein | 0.84 | 0.32 | -0.31 | |||
4 | AT5G35530 | Ribosomal protein S3 family protein | 0.82 | 0.31 | -0.3 | |||
5 | AT3G18740 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | receptor-like kinase 902 | 0.81 | 0.32 | -0.33 | ||
6 | AT1G79610 | Na+/H+ antiporter 6 | ARABIDOPSIS NA+/H+ ANTIPORTER 6, Na+/H+ antiporter 6 |
-0.81 | 0.3 | -0.32 | ||
7 | AT3G07270 | GTP cyclohydrolase I | 0.8 | 0.32 | -0.35 | |||
8 | AT3G18210 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.8 | 0.31 | -0.34 | |||
9 | AT1G23030 | ARM repeat superfamily protein | 0.8 | 0.33 | -0.33 | |||
10 | AT3G16940 | calmodulin binding;transcription regulators | -0.79 | 0.28 | -0.29 | |||
11 | AT3G52580 | Ribosomal protein S11 family protein | 0.79 | 0.31 | -0.3 | |||
12 | AT1G22920 | COP9 signalosome 5A | ARABIDOPSIS JAB1 HOMOLOG 1, COP9 signalosome 5A, JAB1 |
0.78 | 0.34 | -0.32 | ||
13 | AT1G02310 | Glycosyl hydrolase superfamily protein | endo-beta-mannanase 1 | -0.78 | 0.31 | -0.33 | ||
14 | AT3G54970 | D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein |
0.78 | 0.32 | -0.31 | |||
15 | AT3G61960 | Protein kinase superfamily protein | -0.78 | 0.32 | -0.31 | |||
16 | AT5G20280 | sucrose phosphate synthase 1F | sucrose phosphate synthase 1F, sucrose phosphate synthase 1F, sucrose-phosphate synthase A1 |
-0.77 | 0.31 | -0.31 | ||
17 | AT4G33240 | 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases |
FORMS APLOID AND BINUCLEATE CELLS 1A |
-0.77 | 0.32 | -0.33 | ||
18 | AT4G28570 | Long-chain fatty alcohol dehydrogenase family protein | -0.77 | 0.31 | -0.31 | |||
19 | AT3G23880 | F-box and associated interaction domains-containing protein | 0.77 | 0.31 | -0.3 | |||
20 | AT1G02640 | beta-xylosidase 2 | BETA-XYLOSIDASE 2, beta-xylosidase 2 |
0.77 | 0.34 | -0.31 | ||
21 | AT3G55380 | ubiquitin-conjugating enzyme 14 | ubiquitin-conjugating enzyme 14 | 0.77 | 0.32 | -0.33 | ||
22 | AT1G16920 | RAB GTPase homolog A1B | RAB GTPase homolog A1B, RAB11, RAB GTPase homolog A1B |
0.76 | 0.31 | -0.31 | ||
23 | AT2G18400 | ribosomal protein L6 family protein | 0.76 | 0.34 | -0.31 | |||
24 | AT2G42850 | cytochrome P450, family 718 | cytochrome P450, family 718 | 0.76 | 0.31 | -0.31 | ||
25 | AT5G66920 | SKU5 similar 17 | SKU5 similar 17 | 0.76 | 0.31 | -0.31 | ||
26 | AT5G35560 | DENN (AEX-3) domain-containing protein | -0.76 | 0.33 | -0.35 | |||
27 | AT5G20820 | SAUR-like auxin-responsive protein family | 0.76 | 0.31 | -0.31 | |||
28 | AT5G05430 | RNA-binding protein | 0.76 | 0.3 | -0.3 | |||
29 | AT3G50070 | CYCLIN D3;3 | CYCLIN D3;3 | 0.75 | 0.32 | -0.32 | ||
30 | AT5G05420 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
0.75 | 0.34 | -0.3 | |||
31 | AT5G16470 | zinc finger (C2H2 type) family protein | 0.75 | 0.3 | -0.31 | |||
32 | AT5G13960 | SU(VAR)3-9 homolog 4 | KRYPTONITE, SET DOMAIN PROTEIN 33, SU(VAR)3-9 homolog 4 |
0.75 | 0.32 | -0.31 | ||
33 | AT4G18800 | RAB GTPase homolog A1D | ATHSGBP, ATRAB11B, RAB GTPase homolog A1D, RAB GTPase homolog A1D |
0.74 | 0.29 | -0.32 | ||
34 | AT1G80560 | isopropylmalate dehydrogenase 2 | ARABIDOPSIS ISOPROPYLMALATE DEHYDROGENASE 2, isopropylmalate dehydrogenase 2 |
0.74 | 0.33 | -0.32 | ||
35 | AT1G70310 | spermidine synthase 2 | spermidine synthase 2 | 0.74 | 0.3 | -0.31 | ||
36 | AT3G12710 | DNA glycosylase superfamily protein | 0.74 | 0.31 | -0.31 | |||
37 | AT4G13550 | triglyceride lipases;triglyceride lipases | -0.73 | 0.3 | -0.33 | |||
38 | AT2G26780 | ARM repeat superfamily protein | -0.73 | 0.31 | -0.32 | |||
39 | AT5G02540 | NAD(P)-binding Rossmann-fold superfamily protein | 0.73 | 0.28 | -0.29 | |||
40 | AT4G34750 | SAUR-like auxin-responsive protein family | 0.73 | 0.32 | -0.3 | |||
41 | AT1G15250 | Zinc-binding ribosomal protein family protein | 0.73 | 0.31 | -0.31 | |||
42 | AT4G30130 | Protein of unknown function (DUF630 and DUF632) | 0.73 | 0.32 | -0.32 | |||
43 | AT2G02470 | alfin-like 6 | alfin-like 6 | 0.73 | 0.35 | -0.33 | ||
44 | AT5G03720 | heat shock transcription factor A3 | ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A3, heat shock transcription factor A3 |
0.73 | 0.3 | -0.3 | ||
45 | AT1G64580 | Pentatricopeptide repeat (PPR) superfamily protein | 0.72 | 0.3 | -0.3 | |||
46 | AT3G62590 | alpha/beta-Hydrolases superfamily protein | -0.72 | 0.3 | -0.34 | |||
47 | AT5G20640 | Protein of unknown function (DUF567) | 0.72 | 0.31 | -0.31 | |||
48 | AT2G38465 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.72 | 0.31 | -0.34 | |||
49 | AT4G11370 | RING-H2 finger A1A | RING-H2 finger A1A | -0.72 | 0.31 | -0.3 | ||
50 | AT3G49940 | LOB domain-containing protein 38 | LOB domain-containing protein 38 | 0.72 | 0.31 | -0.3 | ||
51 | AT3G51895 | sulfate transporter 3;1 | AST12, sulfate transporter 3;1 | -0.72 | 0.31 | -0.33 | ||
52 | AT3G15880 | WUS-interacting protein 2 | TOPLESS-RELATED 4, WUS-interacting protein 2 |
-0.72 | 0.32 | -0.32 | ||
53 | AT1G69610 | Protein of unknown function (DUF1666) | -0.71 | 0.31 | -0.32 | |||
54 | AT3G21670 | Major facilitator superfamily protein | -0.71 | 0.32 | -0.32 | |||
55 | AT1G68710 | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein |
-0.71 | 0.32 | -0.32 | |||
56 | AT3G13040 | myb-like HTH transcriptional regulator family protein | -0.71 | 0.31 | -0.3 | |||
57 | AT1G51340 | MATE efflux family protein | -0.71 | 0.34 | -0.32 | |||
58 | AT5G58670 | phospholipase C1 | ARABIDOPSIS THALIANA PHOSPHOLIPASE C, phospholipase C1, phospholipase C 1, phospholipase C1 |
-0.71 | 0.33 | -0.32 | ||
59 | AT5G51770 | Protein kinase superfamily protein | -0.7 | 0.32 | -0.3 | |||
60 | AT3G05880 | Low temperature and salt responsive protein family | RARE-COLD-INDUCIBLE 2A | -0.7 | 0.33 | -0.31 | ||
61 | AT4G32940 | gamma vacuolar processing enzyme | gamma vacuolar processing enzyme, GAMMAVPE |
-0.7 | 0.31 | -0.31 | ||
62 | AT5G52430 | hydroxyproline-rich glycoprotein family protein | -0.7 | 0.32 | -0.31 | |||
63 | AT5G40210 | nodulin MtN21 /EamA-like transporter family protein | -0.69 | 0.32 | -0.3 | |||
64 | AT4G32770 | tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1) |
SUCROSE EXPORT DEFECTIVE 1, VITAMIN E DEFICIENT 1 |
-0.69 | 0.3 | -0.33 | ||
65 | AT2G47180 | galactinol synthase 1 | galactinol synthase 1, galactinol synthase 1 |
-0.69 | 0.31 | -0.32 | ||
66 | AT5G26240 | chloride channel D | ATCLC-D, chloride channel D | -0.68 | 0.31 | -0.32 | ||
67 | AT1G79270 | evolutionarily conserved C-terminal region 8 | evolutionarily conserved C-terminal region 8 |
-0.68 | 0.3 | -0.31 | ||
68 | AT1G32130 | Transcription elongation factor (TFIIS) family protein | ARABIDOPSIS THALIANA IWS1 (FROM YEAST INTERACTS WITH SPT6), HIGH NITROGEN INSENSITIVE 9, IWS1 |
-0.68 | 0.29 | -0.29 | ||
69 | AT1G23230 | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
-0.68 | 0.31 | -0.32 | |||
70 | AT4G32160 | Phox (PX) domain-containing protein | -0.68 | 0.31 | -0.32 | |||
71 | AT1G53100 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
-0.68 | 0.31 | -0.31 | |||
72 | AT5G43560 | TRAF-like superfamily protein | -0.67 | 0.31 | -0.34 | |||
73 | AT4G01210 | glycosyl transferase family 1 protein | -0.67 | 0.34 | -0.33 | |||
74 | AT5G12270 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.67 | 0.33 | -0.32 | |||
75 | AT4G01290 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1744 Blast hits to 1308 proteins in 219 species: Archae - 0; Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink). |
-0.67 | 0.33 | -0.31 | |||
76 | AT3G53980 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.67 | 0.28 | -0.31 | |||
77 | AT3G07160 | glucan synthase-like 10 | glucan synthase-like 10, CALS9, gsl10, glucan synthase-like 10 |
-0.66 | 0.31 | -0.31 | ||
78 | AT2G48060 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). |
-0.66 | 0.3 | -0.31 | |||
79 | AT1G34420 | leucine-rich repeat transmembrane protein kinase family protein |
-0.66 | 0.33 | -0.32 | |||
80 | AT2G23980 | cyclic nucleotide-gated channel 6 | cyclic nucleotide-gated channel 6, CYCLIC NUCLEOTIDE GATED CHANNEL 6, cyclic nucleotide-gated channel 6 |
-0.66 | 0.34 | -0.3 | ||
81 | AT1G33270 | Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein |
-0.66 | 0.34 | -0.3 | |||
82 | AT5G67210 | Protein of unknown function (DUF579) | IRX15-LIKE | -0.66 | 0.31 | -0.31 | ||
83 | AT3G14720 | MAP kinase 19 | ARABIDOPSIS THALIANA MAP KINASE 19, MAP kinase 19 |
-0.66 | 0.31 | -0.31 | ||
84 | AT4G33040 | Thioredoxin superfamily protein | -0.66 | 0.32 | -0.3 | |||
85 | AT1G59640 | BIG PETAL P | BIG PETAL, BIG PETAL P, BIG PETAL UB, ZCW32 |
-0.66 | 0.33 | -0.31 | ||
86 | AT5G50800 | Nodulin MtN3 family protein | AtSWEET13, SWEET13 | -0.66 | 0.33 | -0.34 | ||
87 | AT3G08870 | Concanavalin A-like lectin protein kinase family protein | -0.66 | 0.33 | -0.29 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
88 | C0225 | Raffinose | D-(+)-Raffinose | Raffinose | ajugose biosynthesis II (galactinol-independent), stachyose biosynthesis, stachyose degradation |
-0.77 | 0.43 | -0.43 | ||
89 | C0106 | Glyceric acid | D,L-Glyceric acid | Glycerate | photorespiration | -0.74 | 0.3 | -0.31 | ||
90 | C0107 | Glycine | - | Glycine | 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, folate polyglutamylation, gamma-glutamyl cycle (plant pathway), glutathione biosynthesis, glutathione-mediated detoxification II, folate transformations II, indole glucosinolate breakdown (active in intact plant cell), glycine cleavage complex, camalexin biosynthesis, thiamine biosynthesis II, tRNA charging, glycine biosynthesis, glutathione degradation, photorespiration |
-0.72 | 0.43 | -0.45 | ||
91 | C0257 | Tryptophan | L-Tryptophan | L-Tryptophan | glucosinolate biosynthesis from tryptophan, IAA biosynthesis I, tryptophan biosynthesis, camalexin biosynthesis, tRNA charging |
-0.7 | 0.3 | -0.3 | ||
92 | C0014 | O-Acetylserine | O-Acetyl-L-serine | O-Acetyl-L-serine | cysteine biosynthesis I, seleno-amino acid biosynthesis |
-0.69 | 0.3 | -0.32 |