AGICode | AT3G07810 |
Description | RNA-binding (RRM/RBD/RNP motifs) family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G07810 | RNA-binding (RRM/RBD/RNP motifs) family protein | 1 | 0.32 | -0.31 | |||
2 | AT3G01130 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.78 | 0.34 | -0.3 | |||
3 | AT2G43160 | ENTH/VHS family protein | 0.71 | 0.32 | -0.32 | |||
4 | AT2G19810 | CCCH-type zinc finger family protein | AtOZF1, Oxidation-related Zinc Finger 1 |
-0.71 | 0.3 | -0.33 | ||
5 | AT5G05920 | deoxyhypusine synthase | deoxyhypusine synthase, embryo sac development arrest 22 |
0.71 | 0.29 | -0.31 | ||
6 | AT5G62470 | myb domain protein 96 | MYB DOMAIN PROTEIN 96, myb domain protein 96, MYBCOV1 |
-0.71 | 0.3 | -0.32 | ||
7 | AT1G08040 | Protein of unknown function (DUF707) | -0.71 | 0.33 | -0.3 | |||
8 | AT3G59020 | ARM repeat superfamily protein | 0.7 | 0.33 | -0.3 | |||
9 | AT4G34000 | abscisic acid responsive elements-binding factor 3 | abscisic acid responsive elements-binding factor 3, AtABF3, DC3 PROMOTER-BINDING FACTOR 5 |
-0.69 | 0.3 | -0.3 | ||
10 | AT5G11430 | SPOC domain / Transcription elongation factor S-II protein | 0.68 | 0.31 | -0.32 | |||
11 | AT5G48970 | Mitochondrial substrate carrier family protein | 0.67 | 0.33 | -0.3 | |||
12 | AT3G07060 | NHL domain-containing protein | embryo defective 1974 | 0.67 | 0.32 | -0.31 | ||
13 | AT5G39760 | homeobox protein 23 | homeobox protein 23, homeobox protein 23, ZINC FINGER HOMEODOMAIN 10 |
0.67 | 0.32 | -0.33 | ||
14 | AT3G04080 | apyrase 1 | apyrase 1, apyrase 1 | 0.67 | 0.3 | -0.3 | ||
15 | AT1G51590 | alpha-mannosidase 1 | ALPHA-MANNOSIDASE IB, alpha-mannosidase 1 |
0.66 | 0.34 | -0.31 | ||
16 | AT5G15190 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 7 Blast hits to 7 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.66 | 0.34 | -0.33 | |||
17 | AT4G09630 | Protein of unknown function (DUF616) | 0.66 | 0.32 | -0.3 | |||
18 | AT2G40730 | Protein kinase family protein with ARM repeat domain | cytoplasmic tRNA export protein | 0.65 | 0.33 | -0.31 | ||
19 | AT4G08090 | transposable element gene | 0.65 | 0.32 | -0.3 | |||
20 | AT1G51350 | ARM repeat superfamily protein | 0.65 | 0.3 | -0.32 | |||
21 | AT4G05100 | myb domain protein 74 | myb domain protein 74, myb domain protein 74 |
-0.65 | 0.3 | -0.32 | ||
22 | AT4G33650 | dynamin-related protein 3A | ARABIDOPSIS DYNAMIN-LIKE 2, ABERRANT PEROXISOME MORPHOLOGY 1, dynamin-related protein 3A |
0.64 | 0.3 | -0.32 | ||
23 | AT1G55620 | chloride channel F | ATCLC-F, chloride channel F, CHLORIDE CHANNEL F |
0.64 | 0.32 | -0.32 | ||
24 | AT5G02850 | hydroxyproline-rich glycoprotein family protein | 0.64 | 0.3 | -0.3 | |||
25 | AT1G66770 | Nodulin MtN3 family protein | AtSWEET6, SWEET6 | 0.64 | 0.3 | -0.31 | ||
26 | AT1G53170 | ethylene response factor 8 | ATERF-8, ETHYLENE RESPONSE ELEMENT BINDING FACTOR 4, ethylene response factor 8 |
-0.64 | 0.32 | -0.32 | ||
27 | AT2G06000 | Pentatricopeptide repeat (PPR) superfamily protein | 0.64 | 0.32 | -0.31 | |||
28 | AT4G38880 | GLN phosphoribosyl pyrophosphate amidotransferase 3 | GLN phosphoribosyl pyrophosphate amidotransferase 3, GLN phosphoribosyl pyrophosphate amidotransferase 3 |
0.63 | 0.33 | -0.32 | ||
29 | AT4G09600 | GAST1 protein homolog 3 | GAST1 protein homolog 3 | -0.62 | 0.31 | -0.31 | ||
30 | AT3G51750 | unknown protein; Has 15 Blast hits to 14 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.32 | -0.32 | |||
31 | AT5G04840 | bZIP protein | 0.62 | 0.33 | -0.31 | |||
32 | AT2G16920 | ubiquitin-conjugating enzyme 23 | PHO2 FAMILY UBIQUITIN CONJUGATION ENZYME 2, ubiquitin-conjugating enzyme 23 |
0.62 | 0.32 | -0.33 | ||
33 | AT3G58050 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41960.1); Has 13384 Blast hits to 8116 proteins in 546 species: Archae - 41; Bacteria - 766; Metazoa - 5596; Fungi - 1431; Plants - 589; Viruses - 46; Other Eukaryotes - 4915 (source: NCBI BLink). |
0.61 | 0.32 | -0.32 | |||
34 | AT3G56110 | prenylated RAB acceptor 1.B1 | prenylated RAB acceptor 1.B1 | 0.61 | 0.31 | -0.31 | ||
35 | AT3G13870 | Root hair defective 3 GTP-binding protein (RHD3) | GOLGI MUTANT 8, ROOT HAIR DEFECTIVE 3 |
0.6 | 0.31 | -0.33 | ||
36 | AT5G16080 | carboxyesterase 17 | carboxyesterase 17, carboxyesterase 17 |
0.6 | 0.3 | -0.3 | ||
37 | AT1G60190 | ARM repeat superfamily protein | AtPUB19, plant U-box 19 | -0.6 | 0.33 | -0.3 | ||
38 | AT5G66670 | Protein of unknown function (DUF677) | -0.6 | 0.29 | -0.31 | |||
39 | AT2G44880 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.59 | 0.31 | -0.31 | |||
40 | AT5G11040 | TRS120 | AtTRS120, TRS120 | 0.59 | 0.3 | -0.31 | ||
41 | AT3G17430 | Nucleotide-sugar transporter family protein | 0.59 | 0.3 | -0.33 | |||
42 | AT2G10780 | transposable element gene | -0.58 | 0.31 | -0.32 | |||
43 | AT5G18930 | Adenosylmethionine decarboxylase family protein | BUSHY AND DWARF 2, SAMDC4 | -0.57 | 0.3 | -0.3 | ||
44 | AT5G36650 | transposable element gene | -0.57 | 0.3 | -0.31 | |||
45 | AT2G44000 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
-0.56 | 0.31 | -0.34 | |||
46 | AT5G14400 | cytochrome P450, family 724, subfamily A, polypeptide 1 | cytochrome P450, family 724, subfamily A, polypeptide 1 |
-0.56 | 0.3 | -0.33 | ||
47 | AT3G30845 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.31 | -0.31 | |||
48 | AT2G03110 | RNA binding;nucleic acid binding | -0.53 | 0.3 | -0.33 |