AT3G09840 : ATCDC48
Query Information
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AGICode AT3G09840
Description cell division cycle 48
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G09840 cell division cycle 48 ATCDC48, cell division cycle 48,
CDC48A		 1 0.32 -0.3
2 AT3G26280 cytochrome P450, family 71, subfamily B, polypeptide 4 cytochrome P450, family 71,
subfamily B, polypeptide 4		 -0.82 0.3 -0.31
3 AT1G20200 PAM domain (PCI/PINT associated module) protein EMBRYO DEFECTIVE 2719, HAPLESS 15 0.81 0.32 -0.31
4 AT2G34630 geranyl diphosphate synthase 1 GERANYLPYROPHOSPHATE SYNTHASE,
geranyl diphosphate synthase 1		 0.81 0.33 -0.35
5 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A 0.8 0.34 -0.32
6 AT5G42790 proteasome alpha subunit F1 ARSENIC TOLERANCE 5, ATPSM30,
proteasome alpha subunit F1		 0.8 0.31 -0.33
7 AT5G15640 Mitochondrial substrate carrier family protein 0.8 0.32 -0.31
8 AT4G02570 cullin 1 cullin 1, AUXIN RESISTANT 6,
cullin 1		 0.8 0.31 -0.32
9 AT1G49500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G19030.1); Has 24 Blast hits to 24 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.79 0.31 -0.3
10 AT5G20570 RING-box 1 RING-BOX 1, HRT1, RING-box 1,
REGULATOR OF CULLINS-1		 0.79 0.32 -0.3
11 AT2G16365 F-box family protein 0.78 0.33 -0.32
12 AT5G35680 Nucleic acid-binding, OB-fold-like protein 0.78 0.32 -0.3
13 AT5G66140 proteasome alpha subunit D2 proteasome alpha subunit D2 0.78 0.3 -0.33
14 AT2G36300 Integral membrane Yip1 family protein 0.78 0.32 -0.32
15 AT1G43640 tubby like protein 5 tubby like protein 5, tubby like
protein 5		 0.77 0.3 -0.32
16 AT5G04170 Calcium-binding EF-hand family protein 0.77 0.33 -0.3
17 AT5G52200 phosphoprotein phosphatase inhibitors AtI-2, inhibitor-2 0.77 0.32 -0.31
18 AT2G02860 sucrose transporter 2 ARABIDOPSIS THALIANA SUCROSE
TRANSPORTER 3, ATSUT2, SUCROSE
TRANSPORTER 3, sucrose transporter
2		 0.76 0.32 -0.29
19 AT2G20580 26S proteasome regulatory subunit S2 1A 26S PROTEASOME REGULATORY SUBUNIT
S2 1A, 26S proteasome regulatory
subunit S2 1A		 0.76 0.32 -0.36
20 AT3G43240 ARID/BRIGHT DNA-binding domain-containing protein 0.76 0.32 -0.3
21 AT4G03120 C2H2 and C2HC zinc fingers superfamily protein 0.76 0.31 -0.3
22 AT2G26990 proteasome family protein ATCSN2, CONSTITUTIVE
PHOTOMORPHOGENIC 12, CSN2, FUSCA
12		 0.76 0.3 -0.29
23 AT1G77440 20S proteasome beta subunit C2 20S proteasome beta subunit C2 0.76 0.3 -0.32
24 AT3G08710 thioredoxin H-type 9 thioredoxin H-type 9, thioredoxin
H-type 9, THIOREDOXIN TYPE H 9		 0.76 0.31 -0.31
25 AT1G07310 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.75 0.32 -0.29
26 AT5G42150 Glutathione S-transferase family protein 0.75 0.33 -0.31
27 AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein 0.75 0.3 -0.3
28 AT1G43860 sequence-specific DNA binding transcription factors 0.75 0.3 -0.32
29 AT3G13520 arabinogalactan protein 12 arabinogalactan protein 12,
ATAGP12		 0.75 0.32 -0.3
30 AT4G31340 myosin heavy chain-related 0.75 0.32 -0.31
31 AT3G12570 FYD FYD 0.75 0.31 -0.32
32 AT4G34450 coatomer gamma-2 subunit, putative / gamma-2 coat protein,
putative / gamma-2 COP, putative		 0.74 0.31 -0.31
33 AT2G46220 Uncharacterized conserved protein (DUF2358) -0.74 0.31 -0.32
34 AT5G56350 Pyruvate kinase family protein 0.74 0.3 -0.33
35 AT1G10390 Nucleoporin autopeptidase 0.74 0.32 -0.32
36 AT1G02000 UDP-D-glucuronate 4-epimerase 2 UDP-D-glucuronate 4-epimerase 2 0.74 0.31 -0.32
37 AT1G15860 Domain of unknown function (DUF298) 0.74 0.3 -0.3
38 AT3G51580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; Has 1768 Blast hits to
1607 proteins in 294 species: Archae - 2; Bacteria - 552;
Metazoa - 381; Fungi - 236; Plants - 306; Viruses - 38;
Other Eukaryotes - 253 (source: NCBI BLink).		 0.74 0.3 -0.32
39 AT3G63460 transducin family protein / WD-40 repeat family protein 0.74 0.34 -0.3
40 AT1G80040 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system
component Cue (InterPro:IPR003892); BEST Arabidopsis
thaliana protein match is: Ubiquitin system component Cue
protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.73 0.33 -0.31
41 AT5G37600 glutamine synthase clone R1 ARABIDOPSIS GLUTAMINE SYNTHASE
1;1, ARABIDOPSIS THALIANA
GLUTAMINE SYNTHASE CLONE R1,
GLUTAMINE SYNTHASE 1;1, glutamine
synthase clone R1		 0.73 0.34 -0.33
42 AT3G51260 20S proteasome alpha subunit PAD1 20S proteasome alpha subunit PAD1 0.73 0.32 -0.33
43 AT1G21920 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.73 0.3 -0.33
44 AT4G34560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits
to 66 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.32 -0.33
45 AT5G15490 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 3 0.73 0.32 -0.34
46 AT5G22060 DNAJ homologue 2 ARABIDOPSIS THALIANA DNAJ
HOMOLOGUE 2, DNAJ homologue 2		 0.73 0.33 -0.31
47 AT1G47750 peroxin 11A peroxin 11A 0.73 0.32 -0.32
48 AT4G02080 secretion-associated RAS super family 2 ASAR1, secretion-associated RAS
super family 2, ATSARA1C,
secretion-associated RAS super
family 2		 0.72 0.33 -0.32
49 AT4G29040 regulatory particle AAA-ATPase 2A regulatory particle AAA-ATPase 2A 0.72 0.32 -0.3
50 AT4G33650 dynamin-related protein 3A ARABIDOPSIS DYNAMIN-LIKE 2,
ABERRANT PEROXISOME MORPHOLOGY 1,
dynamin-related protein 3A		 0.72 0.33 -0.31
51 AT4G23040 Ubiquitin-like superfamily protein 0.72 0.31 -0.32
52 AT5G45550 Mob1/phocein family protein MOB1-like 0.72 0.29 -0.3
53 AT1G49180 protein kinase family protein -0.72 0.3 -0.3
54 AT5G58020 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF602 (InterPro:IPR006735); Has 385 Blast
hits to 385 proteins in 189 species: Archae - 0; Bacteria -
0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0;
Other Eukaryotes - 65 (source: NCBI BLink).		 0.72 0.33 -0.33
55 AT1G13020 eukaryotic initiation factor 4B2 eukaryotic initiation factor 4B2 0.72 0.32 -0.31
56 AT5G01800 saposin B domain-containing protein 0.72 0.33 -0.3
57 AT5G39510 Vesicle transport v-SNARE family protein VESICLE TRANSPORT V-SNARE 11,
ATVTI1A, SHOOT GRAVITROPSIM 4,
VESICLE TRANSPORT V-SNARE 11,
VTI1A, ZIG, ZIG1		 0.72 0.31 -0.29
58 AT1G21080 DNAJ heat shock N-terminal domain-containing protein 0.72 0.33 -0.3
59 AT1G28210 DNAJ heat shock family protein ATJ1 0.72 0.3 -0.31
60 AT3G46060 RAB GTPase homolog 8A ARA-3, ARA3, RAB GTPase homolog
8A, ATRABE1C, RAB GTPase homolog
8A, RABE1c		 0.72 0.32 -0.32
61 AT5G03340 ATPase, AAA-type, CDC48 protein 0.72 0.3 -0.3
62 AT4G04210 plant UBX domain containing protein 4 plant UBX domain containing
protein 4		 0.72 0.3 -0.3 NAS
63 AT4G14230 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.72 0.32 -0.32
64 AT4G24820 26S proteasome, regulatory subunit Rpn7;Proteasome
component (PCI) domain		 0.72 0.33 -0.3
65 AT1G69570 Dof-type zinc finger DNA-binding family protein 0.72 0.34 -0.31
66 AT3G14200 Chaperone DnaJ-domain superfamily protein 0.71 0.31 -0.33
67 AT5G05820 Nucleotide-sugar transporter family protein 0.71 0.32 -0.3
68 AT3G51100 unknown protein; Has 48 Blast hits to 48 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.32 -0.31
69 AT1G78300 general regulatory factor 2 14-3-3 PROTEIN G-BOX FACTOR14
OMEGA, GF14 OMEGA, general
regulatory factor 2		 0.71 0.31 -0.31
70 AT4G26750 hydroxyproline-rich glycoprotein family protein extensin-like 0.71 0.33 -0.32
71 AT5G25760 peroxin4 peroxin4, ubiquitin-conjugating
enzyme 21		 0.71 0.32 -0.32
72 AT5G49380 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana
protein match is: binding (TAIR:AT3G06670.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.71 0.29 -0.31
73 AT4G00570 NAD-dependent malic enzyme 2 NAD-dependent malic enzyme 2 0.71 0.32 -0.32
74 AT2G03510 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 0.71 0.3 -0.31
75 AT1G69640 sphingoid base hydroxylase 1 sphingoid base hydroxylase 1 0.71 0.32 -0.33
76 AT2G32970 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 -0.71 0.33 -0.28
77 AT1G61140 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 embryo sac development arrest 16 0.71 0.32 -0.31
78 AT3G03950 evolutionarily conserved C-terminal region 1 evolutionarily conserved
C-terminal region 1		 0.71 0.31 -0.31
79 AT1G21720 proteasome beta subunit C1 proteasome beta subunit C1 0.71 0.32 -0.31
80 AT1G18460 alpha/beta-Hydrolases superfamily protein -0.7 0.32 -0.31
81 AT1G13560 aminoalcoholphosphotransferase 1 aminoalcoholphosphotransferase 1,
ATAAPT1		 0.7 0.33 -0.32
82 AT4G12590 Protein of unknown function DUF106, transmembrane 0.7 0.33 -0.32
83 AT3G05500 Rubber elongation factor protein (REF) 0.7 0.32 -0.3
84 AT1G52730 Transducin/WD40 repeat-like superfamily protein 0.7 0.31 -0.3
85 AT5G40470 RNI-like superfamily protein -0.7 0.32 -0.32
86 AT3G58570 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.32 -0.34
87 AT5G24460 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.7 0.33 -0.32
88 AT4G30150 CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA
processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast
hits to 49 proteins in 21 species: Archae - 0; Bacteria -
2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.7 0.31 -0.3
89 AT3G12130 KH domain-containing protein / zinc finger (CCCH type)
family protein		 0.7 0.3 -0.33
90 AT5G01960 RING/U-box superfamily protein 0.7 0.32 -0.3
91 AT4G33660 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.69 0.3 -0.31
92 AT3G11280 Duplicated homeodomain-like superfamily protein -0.69 0.33 -0.32
93 AT4G33666 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 11 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.69 0.3 -0.33
94 AT1G06110 SKP1/ASK-interacting protein 16 SKP1/ASK-interacting protein 16 -0.69 0.32 -0.33
95 AT1G22540 Major facilitator superfamily protein -0.69 0.3 -0.33
96 AT4G30993 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.69 0.31 -0.33
97 AT1G23050 hydroxyproline-rich glycoprotein family protein -0.68 0.32 -0.32
98 AT4G10060 Beta-glucosidase, GBA2 type family protein -0.68 0.33 -0.32
99 AT5G15170 tyrosyl-DNA phosphodiesterase-related tyrosyl-DNA phosphodiesterase 1 -0.68 0.3 -0.3
100 AT1G53170 ethylene response factor 8 ATERF-8, ETHYLENE RESPONSE ELEMENT
BINDING FACTOR 4, ethylene
response factor 8		 -0.68 0.31 -0.34
101 AT1G30550 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.67 0.31 -0.33
102 AT5G59340 WUSCHEL related homeobox 2 WUSCHEL related homeobox 2 -0.67 0.31 -0.31
103 AT2G22980 serine carboxypeptidase-like 13 serine carboxypeptidase-like 13 -0.67 0.31 -0.3
104 AT2G45150 cytidinediphosphate diacylglycerol synthase 4 cytidinediphosphate diacylglycerol
synthase 4		 -0.67 0.3 -0.33
105 AT1G67080 abscisic acid (aba)-deficient 4 abscisic acid (ABA)-deficient 4 -0.66 0.32 -0.31
106 AT1G68190 B-box zinc finger family protein -0.66 0.31 -0.32
107 AT4G01330 Protein kinase superfamily protein -0.66 0.31 -0.32
108 AT2G06410 transposable element gene -0.66 0.32 -0.33
109 AT2G29300 NAD(P)-binding Rossmann-fold superfamily protein -0.65 0.31 -0.31
110 AT3G04890 Uncharacterized conserved protein (DUF2358) -0.65 0.31 -0.31
111 AT3G19800 Protein of unknown function (DUF177) -0.64 0.34 -0.28
112 AT1G31370 Ubiquitin-specific protease family C19-related protein -0.64 0.3 -0.31
113 AT5G44660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G20190.1); Has 944 Blast hits
to 462 proteins in 141 species: Archae - 2; Bacteria - 370;
Metazoa - 161; Fungi - 102; Plants - 64; Viruses - 6; Other
Eukaryotes - 239 (source: NCBI BLink).		 -0.64 0.3 -0.33
114 AT3G16060 ATP binding microtubule motor family protein -0.64 0.33 -0.33
115 AT1G69490 NAC-like, activated by AP3/PI Arabidopsis NAC domain containing
protein 29, NAC-LIKE, ACTIVATED BY
AP3/PI, NAC-like, activated by
AP3/PI		 -0.64 0.3 -0.31
116 AT1G01310 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.64 0.3 -0.31
117 AT1G73970 unknown protein; Has 34 Blast hits to 33 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.63 0.3 -0.31
118 AT5G03230 Protein of unknown function, DUF584 -0.63 0.31 -0.3
119 AT1G19060 Protein of unknown function (DUF626) -0.63 0.3 -0.32
120 AT4G05210 Trimeric LpxA-like enzymes superfamily protein AtLpxD1, lipid X D1 -0.63 0.32 -0.31
121 AT2G38820 Protein of unknown function (DUF506) -0.62 0.32 -0.3
122 AT5G27080 Transducin family protein / WD-40 repeat family protein AtCDC20.3, cell division cycle
20.3		 -0.61 0.31 -0.31
123 AT1G68530 3-ketoacyl-CoA synthase 6 ECERIFERUM 6, CUTICULAR 1, G2,
3-ketoacyl-CoA synthase 6,
POLLEN-PISTIL INCOMPATIBILITY 1		 -0.61 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
124 C0215 PR_MST_2527.1 - - - 0.73 0.45 -0.41