AT3G02900 : -
Query Information
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AGICode AT3G02900
Description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast hits to 80 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G02900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast
hits to 80 proteins in 21 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 1 0.32 -0.31
2 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 0.82 0.33 -0.32
3 AT2G20270 Thioredoxin superfamily protein 0.79 0.34 -0.31
4 AT4G33350 Tic22-like family protein translocon at the inner envelope
membrane of chloroplasts 22-IV,
translocon at the inner envelope
membrane of chloroplasts 22-IV		 0.78 0.32 -0.32
5 AT3G03860 APR-like 5 APR-like 5, APR-like 5 0.77 0.31 -0.32
6 AT4G22310 Uncharacterised protein family (UPF0041) 0.75 0.32 -0.31
7 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 0.75 0.31 -0.3
8 AT1G18680 HNH endonuclease domain-containing protein 0.73 0.3 -0.32
9 AT5G06580 FAD-linked oxidases family protein 0.73 0.28 -0.32
10 AT1G11750 CLP protease proteolytic subunit 6 CLP protease proteolytic subunit
6, NUCLEAR-ENCODED CLPP 1, NCLPP6		 0.73 0.31 -0.32
11 AT4G34720 ATPase, F0/V0 complex, subunit C protein ATVHA-C1, AVA-P1, VACUOLAR
H+-PUMPING ATPASE C1		 0.71 0.34 -0.3
12 AT1G09130 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.71 0.33 -0.31
13 AT2G44620 mitochondrial acyl carrier protein 1 mitochondrial acyl carrier protein
1, MITOCHONDRIAL ACYL CARRIER
PROTEIN 1		 0.71 0.33 -0.31
14 AT4G17300 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 ATNS1, NS1, ovule abortion 8 0.71 0.31 -0.32
15 AT2G25310 Protein of unknown function (DUF2012) 0.71 0.33 -0.33
16 AT5G17560 BolA-like family protein 0.71 0.32 -0.34
17 AT1G61780 postsynaptic protein-related 0.71 0.31 -0.31
18 AT3G57810 Cysteine proteinases superfamily protein 0.71 0.32 -0.32
19 AT1G09250 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.7 0.34 -0.3
20 AT2G28430 unknown protein; Has 28 Blast hits to 28 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.32 -0.33
21 AT5G23570 XS domain-containing protein / XS zinc finger
domain-containing protein-related		 SUPPRESSOR OF GENE SILENCING 3,
SUPPRESSOR OF GENE SILENCING 3		 -0.7 0.32 -0.31
22 AT5G47870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
cobalt ion binding (TAIR:AT1G71310.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 radiation sensitive 51-2, RAD52-2B 0.7 0.32 -0.31
23 AT4G31990 aspartate aminotransferase 5 ASPARTATE AMINOTRANSFERASE
DEFICIENT 3, aspartate
aminotransferase 5, ATAAT1		 0.7 0.33 -0.29
24 AT1G78260 RNA-binding (RRM/RBD/RNP motifs) family protein 0.7 0.3 -0.33
25 AT4G25700 beta-hydroxylase 1 B1, BETA CAROTENOID HYDROXYLASE 1,
beta-hydroxylase 1, chy1		 0.7 0.32 -0.32
26 AT1G50670 OTU-like cysteine protease family protein 0.69 0.32 -0.3
27 AT1G22520 Domain of unknown function (DUF543) 0.69 0.31 -0.31
28 AT5G10450 G-box regulating factor 6 14-3-3 PROTEIN G-BOX FACTOR14
LAMBDA, AFT1, G-box regulating
factor 6		 0.69 0.33 -0.3
29 AT4G17040 CLP protease R subunit 4 CLP protease R subunit 4, happy on
norflurazon 5		 0.69 0.32 -0.32
30 AT5G20060 alpha/beta-Hydrolases superfamily protein 0.69 0.33 -0.32
31 AT1G19580 gamma carbonic anhydrase 1 gamma carbonic anhydrase 1 0.69 0.31 -0.33
32 AT3G01850 Aldolase-type TIM barrel family protein 0.69 0.32 -0.31
33 AT4G34350 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CHLOROPLAST BIOGENESIS 6,
4-hydroxy-3-methylbut-2-enyl
diphosphate reductase, ISPH		 0.68 0.32 -0.31
34 AT5G06130 chaperone protein dnaJ-related 0.68 0.3 -0.33
35 AT2G46505 succinate dehydrogenase subunit 4 succinate dehydrogenase subunit 4 0.68 0.3 -0.3
36 AT1G27385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF493 (InterPro:IPR007454);
Has 76 Blast hits to 76 proteins in 23 species: Archae - 0;
Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.68 0.31 -0.31
37 AT5G40810 Cytochrome C1 family 0.67 0.33 -0.31
38 AT3G58630 sequence-specific DNA binding transcription factors 0.67 0.32 -0.31
39 AT5G58240 FRAGILE HISTIDINE TRIAD FRAGILE HISTIDINE TRIAD 0.67 0.31 -0.31
40 AT4G31720 TBP-associated factor II 15 SALT TOLERANCE DURING GERMINATION
1, TBP-ASSOCIATED FACTOR 10,
TBP-associated factor II 15		 0.67 0.3 -0.32
41 AT2G44050 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase /
lumazine synthase / riboflavin synthase		 COI1 SUPPRESSOR1, coronatine
insensitive1 suppressor		 0.67 0.31 -0.32
42 AT1G22750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1475 (InterPro:IPR009943);
Has 185 Blast hits to 155 proteins in 21 species: Archae -
0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64;
Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).		 0.66 0.34 -0.32
43 AT5G60750 CAAX amino terminal protease family protein 0.66 0.32 -0.32
44 AT1G51690 protein phosphatase 2A 55 kDa regulatory subunit B alpha
isoform		 protein phosphatase 2A 55 kDa
regulatory subunit B alpha
isoform, protein phosphatase 2A 55
kDa regulatory subunit B alpha
isoform		 0.66 0.31 -0.31
45 AT4G12060 Double Clp-N motif protein 0.65 0.32 -0.3
46 AT3G20870 ZIP metal ion transporter family zinc transporter 29 0.65 0.3 -0.32
47 AT1G63170 Zinc finger, C3HC4 type (RING finger) family protein 0.65 0.33 -0.33
48 AT4G34265 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G15000.3); Has 76 Blast
hits to 76 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.3 -0.33
49 AT3G02290 RING/U-box superfamily protein 0.64 0.31 -0.34
50 AT1G11570 NTF2-like NTF2-like 0.64 0.32 -0.36
51 AT2G20860 lipoic acid synthase 1 lipoic acid synthase 1 0.64 0.31 -0.32
52 AT3G20970 NFU domain protein 4 ARABIDOPSIS THALIANA NFU DOMAIN
PROTEIN 2, NFU domain protein 4		 0.64 0.31 -0.31
53 AT3G13550 Ubiquitin-conjugating enzyme family protein CYTOKININ-INSENSITIVE 4,
CONSTITUTIVE PHOTOMORPHOGENIC 10,
EMBRYO DEFECTIVE 144, FUSCA 9		 0.64 0.31 -0.33
54 AT5G13720 Uncharacterised protein family (UPF0114) 0.64 0.34 -0.29
55 AT4G36180 Leucine-rich receptor-like protein kinase family protein -0.64 0.31 -0.32
56 AT2G44525 Protein of unknown function (DUF498/DUF598) 0.63 0.3 -0.31
57 AT4G34330 Protein of unknown function (DUF677) -0.63 0.31 -0.3
58 AT3G26870 Plant self-incompatibility protein S1 family -0.61 0.33 -0.31
59 AT1G64320 myosin heavy chain-related -0.6 0.34 -0.31
60 AT4G30970 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.33 -0.33
61 AT3G15720 Pectin lyase-like superfamily protein -0.59 0.31 -0.32
62 AT3G14280 unknown protein; Has 51 Blast hits to 51 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.31 -0.33
63 AT5G40840 Rad21/Rec8-like family protein Sister chromatid cohesion 1 (SCC1)
protein homolog 2, SYN2		 -0.58 0.31 -0.32
64 AT1G50660 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins
in 1325 species: Archae - 461; Bacteria - 2309; Metazoa -
11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other
Eukaryotes - 4809 (source: NCBI BLink).		 -0.58 0.32 -0.31
65 AT1G68270 AMP-dependent synthetase and ligase family protein -0.57 0.31 -0.32
66 AT3G30800 transposable element gene -0.54 0.31 -0.31
67 AT2G31830 endonuclease/exonuclease/phosphatase family protein -0.51 0.32 -0.32
68 AT4G31950 cytochrome P450, family 82, subfamily C, polypeptide 3 cytochrome P450, family 82,
subfamily C, polypeptide 3		 -0.51 0.33 -0.29
69 AT3G28540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.5 0.31 -0.33
70 AT4G35700 zinc finger (C2H2 type) family protein DUO1-activated zinc finger 3 -0.49 0.33 -0.33
71 AT3G43080 transposable element gene -0.49 0.3 -0.32
72 AT1G60280 NAC domain containing protein 23 NAC domain containing protein 23,
NAC domain containing protein 23		 -0.49 0.34 -0.34
73 AT1G34070 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein
(InterPro:IPR005162); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast
hits to 647 proteins in 29 species: Archae - 0; Bacteria -
0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink).		 -0.48 0.31 -0.3
74 AT4G31890 ARM repeat superfamily protein -0.48 0.32 -0.31
75 AT4G20800 FAD-binding Berberine family protein -0.47 0.32 -0.32
76 AT1G02980 cullin 2 ATCUL2, cullin 2 -0.47 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
77 C0230 Rutin - - polyphenol biosynthesis -0.77 0.45 -0.45
78 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		-0.71 0.44 -0.44 C0035
79 C0132 Kaempferol-3-O-rutinoside - - - -0.62 0.44 -0.42