AGICode | AT3G08700 |
Description | ubiquitin-conjugating enzyme 12 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G08700 | ubiquitin-conjugating enzyme 12 | ubiquitin-conjugating enzyme 12 | 1 | 0.34 | -0.31 | ||
2 | AT1G26370 | RNA helicase family protein | 0.69 | 0.31 | -0.31 | |||
3 | AT2G26970 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.69 | 0.34 | -0.3 | |||
4 | AT2G03690 | coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein |
-0.68 | 0.33 | -0.29 | |||
5 | AT4G02710 | Kinase interacting (KIP1-like) family protein | 0.68 | 0.33 | -0.34 | |||
6 | AT5G53635 | F-box/RNI-like/FBD-like domains-containing protein | 0.68 | 0.35 | -0.31 | |||
7 | AT4G30480 | Tetratricopeptide repeat (TPR)-like superfamily protein | AtTPR1, tetratricopeptide repeat 1 | -0.67 | 0.3 | -0.31 | ||
8 | AT5G13070 | MSF1-like family protein | -0.67 | 0.3 | -0.31 | |||
9 | AT3G20020 | protein arginine methyltransferase 6 | ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 6, protein arginine methyltransferase 6 |
0.66 | 0.31 | -0.31 | ||
10 | AT1G32030 | Domain of unknown function (DUF313) | 0.65 | 0.32 | -0.32 | |||
11 | AT1G63730 | Disease resistance protein (TIR-NBS-LRR class) family | 0.65 | 0.32 | -0.3 | |||
12 | AT5G50410 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.65 | 0.29 | -0.31 | |||
13 | AT1G68750 | phosphoenolpyruvate carboxylase 4 | phosphoenolpyruvate carboxylase 4, phosphoenolpyruvate carboxylase 4 |
0.64 | 0.31 | -0.3 | ||
14 | AT2G17270 | phosphate transporter 3;3 | phosphate transporter 3;3 | 0.64 | 0.3 | -0.31 | ||
15 | AT1G76290 | AMP-dependent synthetase and ligase family protein | 0.64 | 0.29 | -0.33 | |||
16 | AT2G27395 | pseudogene of cysteine protease-related | 0.64 | 0.32 | -0.33 | |||
17 | AT1G17350 | NADH:ubiquinone oxidoreductase intermediate-associated protein 30 |
-0.63 | 0.32 | -0.31 | |||
18 | AT2G36060 | MMS ZWEI homologue 3 | MMS ZWEI homologue 3, UBIQUITIN E2 VARIANT 1C |
-0.62 | 0.29 | -0.31 | ||
19 | AT2G19310 | HSP20-like chaperones superfamily protein | -0.62 | 0.33 | -0.32 | |||
20 | AT4G16280 | RNA binding;abscisic acid binding | FCA | 0.62 | 0.35 | -0.3 | ||
21 | AT2G31340 | embryo defective 1381 | embryo defective 1381 | 0.62 | 0.29 | -0.32 | ||
22 | AT1G49480 | related to vernalization1 1 | related to vernalization1 1 | -0.62 | 0.33 | -0.3 | ||
23 | AT1G48820 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
-0.62 | 0.33 | -0.31 | |||
24 | AT5G47400 | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.62 | 0.33 | -0.31 | |||
25 | AT1G80930 | MIF4G domain-containing protein / MA3 domain-containing protein |
0.62 | 0.33 | -0.32 | |||
26 | AT2G33870 | RAB GTPase homolog A1H | RAB GTPase homolog A1H | 0.61 | 0.3 | -0.33 | ||
27 | AT2G32560 | F-box family protein | -0.61 | 0.3 | -0.32 | |||
28 | AT3G60480 | unknown protein; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.31 | -0.31 | |||
29 | AT1G61150 | LisH and RanBPM domains containing protein | -0.61 | 0.31 | -0.31 | |||
30 | AT5G49440 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.61 | 0.32 | -0.31 | |||
31 | AT5G64950 | Mitochondrial transcription termination factor family protein |
0.6 | 0.31 | -0.3 | |||
32 | AT5G25990 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.6 | 0.33 | -0.29 | |||
33 | AT4G30760 | Putative endonuclease or glycosyl hydrolase | -0.6 | 0.31 | -0.32 | |||
34 | AT5G63135 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.6 | 0.33 | -0.33 | |||
35 | AT3G61860 | RNA-binding (RRM/RBD/RNP motifs) family protein | arginine/serine-rich splicing factor 31, arginine/serine-rich splicing factor 31, arginine/serine-rich splicing factor 31, arginine/serine-rich splicing factor 31 |
-0.6 | 0.32 | -0.32 | ||
36 | AT5G09920 | RNA polymerase II, Rpb4, core protein | ATRPB15.9, NRPB4, RPB15.9, RPB15.9.9 |
-0.6 | 0.32 | -0.33 | ||
37 | AT3G03080 | Zinc-binding dehydrogenase family protein | 0.59 | 0.29 | -0.3 | |||
38 | AT5G46030 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF701, zinc-binding putative (InterPro:IPR007808); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.59 | 0.29 | -0.32 | |||
39 | AT2G15720 | transposable element gene | 0.59 | 0.31 | -0.31 | |||
40 | AT2G01700 | transposable element gene | -0.59 | 0.3 | -0.33 | |||
41 | AT1G12550 | D-isomer specific 2-hydroxyacid dehydrogenase family protein |
hydroxypyruvate reductase 3 | -0.59 | 0.31 | -0.31 | ||
42 | AT3G31380 | transposable element gene | 0.58 | 0.36 | -0.31 | |||
43 | AT1G03900 | non-intrinsic ABC protein 4 | ATP-binding cassette I18, non-intrinsic ABC protein 4, non-intrinsic ABC protein 4 |
-0.58 | 0.31 | -0.32 | ||
44 | AT1G22040 | Galactose oxidase/kelch repeat superfamily protein | -0.58 | 0.31 | -0.32 | |||
45 | AT1G77790 | Glycosyl hydrolase superfamily protein | -0.58 | 0.31 | -0.31 | |||
46 | AT5G09740 | histone acetyltransferase of the MYST family 2 | histone acetyltransferase of the MYST family 2 |
-0.58 | 0.31 | -0.33 | ||
47 | AT1G77020 | DNAJ heat shock N-terminal domain-containing protein | -0.58 | 0.32 | -0.32 | |||
48 | AT1G30910 | Molybdenum cofactor sulfurase family protein | -0.58 | 0.31 | -0.32 | |||
49 | AT2G42670 | Protein of unknown function (DUF1637) | -0.58 | 0.33 | -0.33 | |||
50 | AT5G27240 | DNAJ heat shock N-terminal domain-containing protein | 0.58 | 0.31 | -0.32 | |||
51 | AT3G52510 | F-box associated ubiquitination effector family protein | 0.57 | 0.32 | -0.31 | |||
52 | AT5G12100 | pentatricopeptide (PPR) repeat-containing protein | 0.57 | 0.3 | -0.33 | |||
53 | AT4G34340 | TBP-associated factor 8 | TBP-associated factor 8 | 0.57 | 0.3 | -0.31 | ||
54 | AT1G52720 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.3 | -0.32 | |||
55 | AT5G03430 | phosphoadenosine phosphosulfate (PAPS) reductase family protein |
-0.57 | 0.33 | -0.31 | |||
56 | AT1G43870 | transposable element gene | -0.57 | 0.33 | -0.31 | |||
57 | AT5G41770 | crooked neck protein, putative / cell cycle protein, putative |
0.56 | 0.34 | -0.31 | |||
58 | AT5G37180 | sucrose synthase 5 | ARABIDOPSIS THALIANA SUCROSE SYNTHASE 5, sucrose synthase 5 |
0.56 | 0.32 | -0.29 | ||
59 | AT1G28640 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.56 | 0.3 | -0.3 | |||
60 | AT4G31940 | cytochrome P450, family 82, subfamily C, polypeptide 4 | cytochrome P450, family 82, subfamily C, polypeptide 4 |
0.56 | 0.31 | -0.31 | ||
61 | AT1G53165 | Protein kinase superfamily protein | ATMAP4K ALPHA1 | 0.56 | 0.31 | -0.32 | ||
62 | AT5G36140 | cytochrome P450, family 716, subfamily A, polypeptide 2 | cytochrome P450, family 716, subfamily A, polypeptide 2 |
0.56 | 0.33 | -0.33 | ||
63 | AT2G25520 | Drug/metabolite transporter superfamily protein | 0.56 | 0.3 | -0.32 | |||
64 | AT5G10880 | tRNA synthetase-related / tRNA ligase-related | 0.56 | 0.32 | -0.32 | |||
65 | AT3G09700 | Chaperone DnaJ-domain superfamily protein | -0.56 | 0.31 | -0.3 | |||
66 | ATMG00890 | hypothetical protein | ORF106D | 0.55 | 0.32 | -0.3 | ||
67 | AT2G44590 | DYNAMIN-like 1D | DYNAMIN-like 1D, DYNAMIN-like 1D | 0.55 | 0.33 | -0.32 | ||
68 | AT1G16590 | DNA-binding HORMA family protein | ATREV7, REV7 | -0.55 | 0.3 | -0.3 | ||
69 | AT2G38660 | Amino acid dehydrogenase family protein | -0.55 | 0.33 | -0.32 | |||
70 | AT4G38480 | Transducin/WD40 repeat-like superfamily protein | -0.55 | 0.29 | -0.31 | |||
71 | AT5G16160 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.55 | 0.33 | -0.3 | |||
72 | AT2G21770 | cellulose synthase A9 | CESA09, cellulose synthase A9 | 0.55 | 0.34 | -0.31 | ||
73 | AT1G35570 | transposable element gene | 0.55 | 0.31 | -0.3 | |||
74 | AT4G04880 | adenosine/AMP deaminase family protein | -0.55 | 0.31 | -0.3 | |||
75 | AT4G05620 | Galactose oxidase/kelch repeat superfamily protein | 0.55 | 0.31 | -0.33 | |||
76 | AT1G62410 | MIF4G domain-containing protein | -0.55 | 0.31 | -0.33 | |||
77 | AT3G44070 | Glycosyl hydrolase family 35 protein | 0.54 | 0.31 | -0.31 | |||
78 | AT3G17890 | unknown protein; Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 10; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.32 | -0.3 | |||
79 | AT1G08860 | Calcium-dependent phospholipid-binding Copine family protein |
BONZAI 3 | 0.54 | 0.33 | -0.31 | ||
80 | AT1G18600 | RHOMBOID-like protein 12 | ARABIDOPSIS RHOMBOID-LIKE PROTEIN 12, RHOMBOID-like protein 12 |
-0.54 | 0.32 | -0.32 | ||
81 | AT2G16340 | unknown protein; Has 64 Blast hits to 48 proteins in 21 species: Archae - 2; Bacteria - 36; Metazoa - 11; Fungi - 6; Plants - 3; Viruses - 2; Other Eukaryotes - 4 (source: NCBI BLink). |
0.54 | 0.31 | -0.3 | |||
82 | AT3G53200 | myb domain protein 27 | myb domain protein 27, myb domain protein 27 |
-0.54 | 0.32 | -0.32 | ||
83 | AT3G51940 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03990.1); Has 215 Blast hits to 164 proteins in 38 species: Archae - 0; Bacteria - 35; Metazoa - 16; Fungi - 18; Plants - 121; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). |
0.54 | 0.31 | -0.29 | |||
84 | AT2G38280 | AMP deaminase, putative / myoadenylate deaminase, putative | ADENOSINE 5'-MONOPHOSPHATE DEAMINASE, EMBRYONIC FACTOR1 |
0.54 | 0.3 | -0.31 | ||
85 | AT4G30970 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.54 | 0.32 | -0.32 | |||
86 | AT4G25950 | vacuolar ATP synthase G3 | vacuolar ATP synthase G3 | 0.54 | 0.31 | -0.31 | ||
87 | AT1G68510 | LOB domain-containing protein 42 | LOB domain-containing protein 42 | 0.54 | 0.3 | -0.31 | ||
88 | AT3G19780 | LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT1G33780.1); Has 74 Blast hits to 72 proteins in 32 species: Archae - 0; Bacteria - 24; Metazoa - 11; Fungi - 3; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.53 | 0.32 | -0.31 | |||
89 | AT5G18650 | CHY-type/CTCHY-type/RING-type Zinc finger protein | -0.53 | 0.31 | -0.33 | |||
90 | AT2G22370 | unknown protein; Has 127 Blast hits to 127 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 87; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.53 | 0.33 | -0.31 | |||
91 | AT4G08430 | Ulp1 protease family protein | -0.53 | 0.32 | -0.33 | |||
92 | AT1G02680 | TBP-associated factor 13 | TBP-associated factor 13 | -0.52 | 0.29 | -0.31 | ||
93 | AT1G77780 | Glycosyl hydrolase superfamily protein | -0.52 | 0.31 | -0.32 | |||
94 | AT5G53840 | F-box/RNI-like/FBD-like domains-containing protein | -0.52 | 0.32 | -0.31 | |||
95 | AT5G23330 | Nucleotidylyl transferase superfamily protein | -0.52 | 0.3 | -0.3 |