AT3G08800 : SHORT-ROOT interacting embryonic lethal
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G08800
Description ARM repeat superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G08800 ARM repeat superfamily protein SHORT-ROOT interacting embryonic
lethal		 1 0.33 -0.32
2 AT2G35590 pseudogene, serpin (serine protease inhibitor), putative,
similar to protein zx (Hordeum vulgare subsp. vulgare)
GI:19071, serpin (Triticum aestivum) GI:1885346; contains
Pfam profile PF00079: Serpin (serine protease inhibitor);
this is very likely a pseudogene.; blastp match of 52%
identity and 2.2e-73 P-value to
GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein
{Citrus x paradisi}		 0.69 0.33 -0.33
3 AT2G30840 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.66 0.3 -0.33
4 AT4G10880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10870.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.65 0.33 -0.32
5 AT3G50000 casein kinase II, alpha chain 2 ATCKA2, casein kinase II, alpha
chain 2		 -0.64 0.33 -0.32
6 AT5G56450 Mitochondrial substrate carrier family protein PM-ANT 0.64 0.31 -0.31
7 AT2G37320 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.3 -0.33
8 AT1G66480 plastid movement impaired 2 -0.63 0.31 -0.3
9 AT2G16190 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT1G49330.1); Has 77 Blast hits to 77 proteins in 25
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13;
Plants - 56; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.63 0.3 -0.31
10 AT4G13780 methionine--tRNA ligase, putative / methionyl-tRNA
synthetase, putative / MetRS, putative		 -0.62 0.31 -0.31
11 AT4G31970 cytochrome P450, family 82, subfamily C, polypeptide 2 cytochrome P450, family 82,
subfamily C, polypeptide 2		 -0.62 0.31 -0.33
12 AT2G31910 cation/H+ exchanger 21 cation/H+ exchanger 21, cation/H+
exchanger 21		 -0.61 0.33 -0.3
13 AT2G34330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G29540.1); Has 10 Blast hits
to 10 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.3 -0.3
14 AT2G04032 zinc transporter 7 precursor zinc transporter 7 precursor 0.6 0.33 -0.33
15 AT2G25340 vesicle-associated membrane protein 712 vesicle-associated membrane
protein 712, VAMP712,
vesicle-associated membrane
protein 712		 0.6 0.32 -0.32
16 AT3G05090 Transducin/WD40 repeat-like superfamily protein LATERAL ROOT STIMULATOR 1 -0.6 0.32 -0.3
17 AT2G07728 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cultured cell;
Has 1 Blast hits to 1 proteins in 1 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.31 -0.32
18 AT4G04440 transposable element gene 0.59 0.32 -0.31
19 AT4G35500 Protein kinase superfamily protein -0.59 0.31 -0.28
20 AT1G05770 Mannose-binding lectin superfamily protein 0.59 0.32 -0.32
21 AT1G02540 unknown protein; Has 3327 Blast hits to 2216 proteins in
265 species: Archae - 18; Bacteria - 202; Metazoa - 802;
Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes -
1751 (source: NCBI BLink).		 -0.59 0.32 -0.32
22 AT5G49320 Protein of unknown function (DUF1218) -0.58 0.32 -0.32
23 AT5G42340 Plant U-Box 15 Plant U-Box 15 0.58 0.31 -0.31
24 AT3G27473 Cysteine/Histidine-rich C1 domain family protein -0.58 0.32 -0.32
25 AT5G42640 C2H2 and C2HC zinc fingers superfamily protein 0.58 0.31 -0.31
26 AT3G06000 RNI-like superfamily protein -0.57 0.29 -0.34
27 ATMG00060 NADH dehydrogenase subunit 5C NADH DEHYDROGENASE SUBUNIT 5, NADH
DEHYDROGENASE SUBUNIT 5.3, NADH
dehydrogenase subunit 5C		 -0.57 0.32 -0.3
28 AT4G31750 HOPW1-1-interacting 2 HOPW1-1-interacting 2 -0.57 0.34 -0.29
29 AT3G21470 Pentatricopeptide repeat (PPR-like) superfamily protein 0.56 0.31 -0.33
30 AT2G14830 Regulator of Vps4 activity in the MVB pathway protein 0.56 0.31 -0.33
31 AT4G39610 Protein of unknown function, DUF617 0.56 0.28 -0.33
32 AT2G05390 transposable element gene 0.56 0.32 -0.31
33 AT2G31440 INVOLVED IN: positive regulation of catalytic activity,
protein processing; LOCATED IN: integral to membrane;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Aph-1
(InterPro:IPR009294); Has 268 Blast hits to 262 proteins in
79 species: Archae - 0; Bacteria - 0; Metazoa - 212; Fungi
- 0; Plants - 34; Viruses - 0; Other Eukaryotes - 22
(source: NCBI BLink).		 0.56 0.28 -0.32
34 AT3G30750 transposable element gene 0.56 0.31 -0.32
35 AT4G39410 WRKY DNA-binding protein 13 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 13, WRKY
DNA-binding protein 13		 0.56 0.33 -0.3
36 AT4G00232 DNA-binding storekeeper protein-related transcriptional
regulator		 0.55 0.31 -0.3
37 AT3G54510 Early-responsive to dehydration stress protein (ERD4) -0.55 0.29 -0.33
38 AT4G38670 Pathogenesis-related thaumatin superfamily protein 0.55 0.31 -0.31
39 AT2G17860 Pathogenesis-related thaumatin superfamily protein -0.55 0.33 -0.31
40 AT2G01700 transposable element gene 0.54 0.3 -0.3
41 AT2G35740 nositol transporter 3 NOSITOL TRANSPORTER 3, nositol
transporter 3		 0.53 0.31 -0.32
42 AT5G57260 cytochrome P450, family 71, subfamily B, polypeptide 10 cytochrome P450, family 71,
subfamily B, polypeptide 10		 0.52 0.33 -0.31
43 AT4G02550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02210.2); Has 370 Blast hits
to 300 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 10; Plants - 354; Viruses - 0; Other
Eukaryotes - 6 (source: NCBI BLink).		 -0.52 0.34 -0.31
44 AT3G20850 proline-rich family protein 0.52 0.31 -0.33
45 AT5G63830 HIT-type Zinc finger family protein -0.52 0.33 -0.3
46 AT1G36020 BEST Arabidopsis thaliana protein match is: DEAD/DEAH box
RNA helicase family protein (TAIR:AT1G35530.1); Has 18
Blast hits to 18 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.51 0.3 -0.31
47 AT5G61720 Protein of unknown function (DUF1216) 0.51 0.33 -0.33
48 AT3G18670 Ankyrin repeat family protein 0.51 0.31 -0.31
49 AT5G63730 IBR domain-containing protein ARIADNE 14, ARABIDOPSIS ARIADNE 14 0.51 0.32 -0.31
50 AT5G55720 Pectin lyase-like superfamily protein 0.5 0.34 -0.32
51 AT1G61720 NAD(P)-binding Rossmann-fold superfamily protein BANYULS -0.5 0.34 -0.32
52 AT3G43860 glycosyl hydrolase 9A4 glycosyl hydrolase 9A4, glycosyl
hydrolase 9A4		 0.5 0.3 -0.34