AT3G09500 : -
Query Information
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AGICode AT3G09500
Description Ribosomal L29 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G09500 Ribosomal L29 family protein 1 0.33 -0.31
2 AT5G27770 Ribosomal L22e protein family 0.94 0.32 -0.31
3 AT1G69620 ribosomal protein L34 ribosomal protein L34 0.92 0.33 -0.33
4 AT4G31985 Ribosomal protein L39 family protein 0.92 0.3 -0.31
5 AT5G02450 Ribosomal protein L36e family protein 0.92 0.31 -0.32
6 AT3G07910 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Reactive oxygen species modulator 1 (InterPro:IPR018450);
Has 192 Blast hits to 192 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).		 0.91 0.32 -0.33
7 AT1G34030 Ribosomal protein S13/S18 family 0.91 0.32 -0.31
8 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.91 0.31 -0.32
9 AT3G47370 Ribosomal protein S10p/S20e family protein 0.91 0.32 -0.31
10 AT5G23900 Ribosomal protein L13e family protein 0.91 0.33 -0.34
11 AT5G03850 Nucleic acid-binding, OB-fold-like protein 0.91 0.3 -0.32
12 AT1G04480 Ribosomal protein L14p/L23e family protein 0.9 0.32 -0.34
13 AT1G67430 Ribosomal protein L22p/L17e family protein 0.9 0.33 -0.3
14 AT2G36160 Ribosomal protein S11 family protein 0.9 0.33 -0.29
15 AT4G33865 Ribosomal protein S14p/S29e family protein 0.9 0.32 -0.3
16 AT5G27850 Ribosomal protein L18e/L15 superfamily protein 0.89 0.3 -0.33
17 AT5G57290 60S acidic ribosomal protein family 0.89 0.33 -0.31
18 AT3G56340 Ribosomal protein S26e family protein 0.89 0.31 -0.32
19 AT4G09800 S18 ribosomal protein S18 ribosomal protein 0.89 0.32 -0.32
20 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 0.89 0.31 -0.32
21 AT3G62870 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.89 0.31 -0.29
22 AT5G41520 RNA binding Plectin/S10 domain-containing protein 0.89 0.33 -0.32
23 AT5G19510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.89 0.3 -0.3
24 AT4G00100 ribosomal protein S13A ribosomal protein S13A, POINTED
FIRST LEAF 2, RPS13, ribosomal
protein S13A		 0.89 0.32 -0.33
25 AT5G07090 Ribosomal protein S4 (RPS4A) family protein 0.89 0.31 -0.33
26 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 0.89 0.32 -0.3
27 AT4G16720 Ribosomal protein L23/L15e family protein 0.88 0.32 -0.3
28 AT3G23390 Zinc-binding ribosomal protein family protein 0.88 0.3 -0.34
29 AT2G25210 Ribosomal protein L39 family protein 0.88 0.33 -0.32
30 AT1G74270 Ribosomal protein L35Ae family protein 0.88 0.32 -0.31
31 AT5G06360 Ribosomal protein S8e family protein 0.88 0.33 -0.31
32 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.88 0.32 -0.3
33 AT5G47700 60S acidic ribosomal protein family 0.88 0.32 -0.33
34 AT1G48830 Ribosomal protein S7e family protein 0.88 0.33 -0.3
35 AT4G15000 Ribosomal L27e protein family 0.88 0.28 -0.33
36 AT2G19730 Ribosomal L28e protein family 0.88 0.32 -0.32
37 AT2G44120 Ribosomal protein L30/L7 family protein 0.87 0.31 -0.31
38 AT5G56670 Ribosomal protein S30 family protein 0.87 0.31 -0.31
39 AT3G25520 ribosomal protein L5 ribosomal protein L5, OLIGOCELLULA
5, PIGGYBACK3, RIBOSOMAL PROTEIN
L5 A		 0.87 0.3 -0.32
40 AT3G09200 Ribosomal protein L10 family protein 0.87 0.31 -0.31
41 AT2G39990 eukaryotic translation initiation factor 2 Arabidopsis thaliana eukaryotic
translation initiation factor 3
subunit F, eukaryotic translation
initiation factor 2, eukaryotic
translation initiation factor 3
subunit F		 0.87 0.33 -0.33
42 AT2G34480 Ribosomal protein L18ae/LX family protein 0.87 0.31 -0.31
43 AT2G01250 Ribosomal protein L30/L7 family protein 0.86 0.32 -0.3
44 AT1G26880 Ribosomal protein L34e superfamily protein 0.86 0.31 -0.31
45 AT4G29410 Ribosomal L28e protein family 0.86 0.31 -0.32
46 AT1G44835 YbaK/aminoacyl-tRNA synthetase-associated domain 0.86 0.34 -0.3
47 AT1G75560 zinc knuckle (CCHC-type) family protein 0.86 0.31 -0.32
48 AT3G53020 Ribosomal protein L24e family protein RIBOSOMAL PROTEIN L24, RPL24B,
SHORT VALVE1		 0.86 0.32 -0.31
49 AT1G22780 Ribosomal protein S13/S18 family POINTED FIRST LEAVES, POINTED
FIRST LEAVES 1, 40S RIBOSOMAL
PROTEIN S18		 0.86 0.32 -0.3
50 AT2G44860 Ribosomal protein L24e family protein 0.86 0.34 -0.32
51 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.86 0.31 -0.29
52 AT2G43460 Ribosomal L38e protein family 0.86 0.32 -0.31
53 AT1G18540 Ribosomal protein L6 family protein 0.86 0.3 -0.32
54 AT2G39390 Ribosomal L29 family protein 0.86 0.28 -0.33
55 AT4G33250 eukaryotic translation initiation factor 3K ATTIF3K1, eukaryotic translation
initiation factor 3K, TIF3K1		 0.86 0.31 -0.31
56 AT3G02560 Ribosomal protein S7e family protein 0.86 0.34 -0.32
57 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.86 0.33 -0.29
58 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 0.86 0.31 -0.3
59 AT3G49010 breast basic conserved 1 breast basic conserved 1, breast
basic conserved 1, 40S RIBOSOMAL
PROTEIN		 0.85 0.32 -0.31
60 AT2G27710 60S acidic ribosomal protein family 0.85 0.32 -0.31
61 AT5G35620 Eukaryotic initiation factor 4E protein EUKARYOTIC INITIATION FACTOR
(ISO)4E, EUKARYOTIC TRANSLATION
INITATION FACTOR 4E2, eukaryotic
translation Initiation Factor
isoform 4E, LSP, LOSS OF
SUSCEPTIBILITY TO POTYVIRUS 1		 0.85 0.31 -0.34
62 AT5G23140 nuclear-encoded CLP protease P7 CLPP2, nuclear-encoded CLP
protease P7		 0.85 0.33 -0.28
63 AT3G05560 Ribosomal L22e protein family 0.85 0.31 -0.32
64 AT1G17880 basic transcription factor 3 ATBTF3, basic transcription factor
3		 0.85 0.33 -0.32
65 AT2G46230 PIN domain-like family protein 0.85 0.31 -0.31
66 AT3G61110 ribosomal protein S27 ribosomal protein S27, ribosomal
protein S27		 0.85 0.33 -0.32
67 AT5G09510 Ribosomal protein S19 family protein 0.85 0.32 -0.33
68 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 0.85 0.34 -0.32
69 AT3G13920 eukaryotic translation initiation factor 4A1 eukaryotic translation initiation
factor 4A1, RH4, TIF4A1		 0.85 0.3 -0.31
70 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 0.85 0.32 -0.32
71 AT3G53890 Ribosomal protein S21e 0.84 0.31 -0.3
72 AT1G76160 SKU5 similar 5 SKU5 similar 5 0.84 0.32 -0.31
73 AT1G18080 Transducin/WD40 repeat-like superfamily protein ATARCA, RACK1A, RECEPTOR FOR
ACTIVATED C KINASE 1 A		 0.84 0.33 -0.31
74 AT1G73230 Nascent polypeptide-associated complex NAC 0.84 0.33 -0.31
75 AT1G23290 Ribosomal protein L18e/L15 superfamily protein RIBOSOMAL PROTEIN L27A, RPL27AB 0.84 0.32 -0.31
76 AT4G34670 Ribosomal protein S3Ae 0.84 0.32 -0.32
77 AT1G01100 60S acidic ribosomal protein family 0.84 0.34 -0.31
78 AT2G41840 Ribosomal protein S5 family protein 0.84 0.32 -0.31
79 AT3G02080 Ribosomal protein S19e family protein 0.84 0.32 -0.32
80 AT5G26360 TCP-1/cpn60 chaperonin family protein 0.84 0.34 -0.3
81 AT5G22440 Ribosomal protein L1p/L10e family 0.84 0.3 -0.33
82 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.84 0.33 -0.33
83 AT1G31817 Ribosomal L18p/L5e family protein NUCLEAR FUSION DEFECTIVE 3 0.84 0.3 -0.32
84 AT2G45710 Zinc-binding ribosomal protein family protein 0.83 0.31 -0.3
85 AT5G67510 Translation protein SH3-like family protein 0.83 0.31 -0.32
86 AT1G14320 Ribosomal protein L16p/L10e family protein ribosomal protein L10, ribosomal
protein L10 A, SUPPRESSOR OF
ACAULIS 52		 0.83 0.3 -0.32
87 AT2G27720 60S acidic ribosomal protein family 0.83 0.32 -0.31
88 AT4G17970 aluminum-activated, malate transporter 12 aluminum-activated, malate
transporter 12, ATALMT12		 -0.83 0.32 -0.31
89 AT3G05810 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: IGR protein
motif (InterPro:IPR019083); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G26800.1); Has
62 Blast hits to 62 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.83 0.3 -0.31
90 AT5G44340 tubulin beta chain 4 tubulin beta chain 4 0.83 0.33 -0.31
91 AT2G46680 homeobox 7 homeobox 7, ARABIDOPSIS THALIANA
HOMEOBOX 7, homeobox 7		 -0.83 0.34 -0.32
92 AT1G26740 Ribosomal L32p protein family 0.83 0.31 -0.3
93 AT2G19740 Ribosomal protein L31e family protein 0.83 0.31 -0.32
94 AT3G14600 Ribosomal protein L18ae/LX family protein 0.82 0.32 -0.31
95 AT1G08360 Ribosomal protein L1p/L10e family 0.82 0.32 -0.3
96 AT2G21290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.82 0.31 -0.31
97 AT1G72770 homology to ABI1 HYPERSENSITIVE TO ABA1 -0.82 0.31 -0.31
98 AT5G23740 ribosomal protein S11-beta ribosomal protein S11-beta 0.82 0.3 -0.31
99 AT2G17360 Ribosomal protein S4 (RPS4A) family protein 0.82 0.3 -0.34
100 AT3G18740 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein receptor-like kinase 902 0.82 0.31 -0.3
101 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 0.82 0.29 -0.33
102 AT5G43970 translocase of outer membrane 22-V ATTOM22-V, translocase of outer
membrane 22-V, TRANSLOCASE OUTER
MITOCHONDRIAL MEMBRANE 22-V		 0.82 0.31 -0.31
103 AT4G26230 Ribosomal protein L31e family protein 0.82 0.3 -0.32
104 AT1G22370 UDP-glucosyl transferase 85A5 UDP-glucosyl transferase 85A5,
UDP-glucosyl transferase 85A5		 -0.81 0.31 -0.32
105 AT4G28490 Leucine-rich receptor-like protein kinase family protein HAESA, RECEPTOR-LIKE PROTEIN
KINASE 5		 -0.8 0.33 -0.32
106 AT5G23050 acyl-activating enzyme 17 acyl-activating enzyme 17 -0.79 0.32 -0.29
107 AT1G62540 flavin-monooxygenase glucosinolate S-oxygenase 2 flavin-monooxygenase glucosinolate
S-oxygenase 2		 -0.79 0.32 -0.32
108 AT4G36210 Protein of unknown function (DUF726) -0.79 0.33 -0.33
109 AT3G11410 protein phosphatase 2CA AHG3, ARABIDOPSIS THALIANA PROTEIN
PHOSPHATASE 2CA, protein
phosphatase 2CA		 -0.79 0.33 -0.34
110 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.78 0.33 -0.32
111 AT3G15790 methyl-CPG-binding domain 11 ATMBD11, methyl-CPG-binding domain
11		 -0.78 0.31 -0.3
112 AT1G51140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.78 0.33 -0.3
113 AT2G37870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.77 0.31 -0.31
114 AT3G61890 homeobox 12 homeobox 12, ARABIDOPSIS THALIANA
HOMEOBOX 12, homeobox 12		 -0.76 0.33 -0.3
115 AT1G80310 sulfate transmembrane transporters molybdate transporter 2 -0.76 0.29 -0.3
116 AT5G28520 Mannose-binding lectin superfamily protein -0.76 0.33 -0.32
117 AT2G35060 K+ uptake permease 11 K+ uptake permease 11 -0.75 0.3 -0.3
118 AT3G13784 cell wall invertase 5 cell wall invertase 5, cell wall
invertase 5		 -0.75 0.32 -0.3
119 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 -0.75 0.31 -0.32
120 AT1G07430 highly ABA-induced PP2C gene 2 highly ABA-induced PP2C gene 2 -0.74 0.32 -0.3
121 AT2G18050 histone H1-3 histone H1-3 -0.74 0.31 -0.3
122 AT3G19620 Glycosyl hydrolase family protein -0.74 0.31 -0.3
123 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 -0.74 0.31 -0.33
124 AT5G08380 alpha-galactosidase 1 alpha-galactosidase 1,
alpha-galactosidase 1		 -0.74 0.33 -0.32
125 AT1G79520 Cation efflux family protein -0.73 0.3 -0.3
126 AT2G35680 Phosphotyrosine protein phosphatases superfamily protein -0.73 0.3 -0.3
127 AT1G28260 Telomerase activating protein Est1 -0.73 0.29 -0.34
128 AT4G17030 expansin-like B1 AT-EXPR, expansin-like B1,
ATEXPR1, ATHEXP BETA 3.1,
expansin-like B1, EXPR		 -0.72 0.31 -0.32
129 AT5G59310 lipid transfer protein 4 lipid transfer protein 4 -0.72 0.32 -0.3
130 AT3G57540 Remorin family protein -0.71 0.31 -0.34
131 AT5G43840 heat shock transcription factor A6A heat shock transcription factor
A6A, heat shock transcription
factor A6A		 -0.71 0.31 -0.3
132 AT5G45310 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: stem, inflorescence meristem, root, leaf; EXPRESSED
DURING: LP.04 four leaves visible; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.71 0.32 -0.33
133 AT3G08870 Concanavalin A-like lectin protein kinase family protein -0.71 0.31 -0.33
134 AT2G25590 Plant Tudor-like protein -0.7 0.31 -0.32
135 AT2G30550 alpha/beta-Hydrolases superfamily protein -0.7 0.31 -0.29
136 AT4G03200 catalytics -0.7 0.31 -0.31
137 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 -0.7 0.31 -0.29
138 AT4G19960 K+ uptake permease 9 ATKUP9, HAK9, KT9, K+ uptake
permease 9		 -0.69 0.31 -0.32
139 AT2G47770 TSPO(outer membrane tryptophan-rich sensory
protein)-related		 TSPO(outer membrane
tryptophan-rich sensory
protein)-related, TSPO(outer
membrane tryptophan-rich sensory
protein)-related		 -0.69 0.33 -0.3
140 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 -0.68 0.3 -0.31
141 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 -0.68 0.33 -0.34
142 AT1G09510 NAD(P)-binding Rossmann-fold superfamily protein -0.68 0.32 -0.32
143 AT1G02310 Glycosyl hydrolase superfamily protein endo-beta-mannanase 1 -0.68 0.31 -0.34
144 AT5G44310 Late embryogenesis abundant protein (LEA) family protein -0.68 0.33 -0.33
145 AT4G33550 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.67 0.34 -0.33
146 AT3G53980 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.67 0.29 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
147 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		-0.8 0.44 -0.45 C0109
148 C0057 Anthranilic acid - Anthranilate tryptophan biosynthesis,
benzoylanthranilate biosynthesis 		-0.76 0.41 -0.48 C0057
149 C0054 Agmatine - Agmatine putrescine biosynthesis I,
putrescine biosynthesis II,
superpathway of polyamine biosynthesis 		-0.74 0.31 -0.33 C0054
150 C0137 Leucine L-Leucine L-Leucine indole-3-acetyl-amino acid biosynthesis,
leucine biosynthesis,
jasmonoyl-amino acid conjugates biosynthesis I,
IAA biosynthesis II,
tRNA charging,
leucine degradation I 		-0.69 0.32 -0.31 C0137
151 C0175 MST_2379.9 - - - -0.68 0.47 -0.46
152 C0260 Tyrosine L-(-)-Tyrosine L-Tyrosine tyrosine biosynthesis II,
4-hydroxyphenylpyruvate biosynthesis,
tyrosine degradation I,
tyrosine biosynthesis I,
tRNA charging,
hydroxycinnamic acid tyramine amides biosynthesis 		-0.68 0.32 -0.31 C0260
153 C0052 Adenosine - Adenosine adenine and adenosine salvage VI,
S-adenosyl-L-methionine cycle II,
cytokinins degradation,
methionine degradation I (to homocysteine),
adenine and adenosine salvage II 		-0.67 0.31 -0.33 C0052