AT3G05860 : -
Query Information
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AGICode AT3G05860
Description MADS-box transcription factor family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G05860 MADS-box transcription factor family protein 1 0.31 -0.33
2 AT3G29080 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.76 0.31 -0.31
3 AT4G30760 Putative endonuclease or glycosyl hydrolase 0.68 0.32 -0.31
4 AT5G51980 Transducin/WD40 repeat-like superfamily protein 0.64 0.32 -0.33
5 AT4G10750 Phosphoenolpyruvate carboxylase family protein 0.63 0.33 -0.3
6 AT3G42600 transposable element gene -0.62 0.31 -0.33
7 AT5G53635 F-box/RNI-like/FBD-like domains-containing protein -0.62 0.3 -0.35
8 AT2G33490 hydroxyproline-rich glycoprotein family protein -0.62 0.33 -0.32
9 AT1G22520 Domain of unknown function (DUF543) 0.61 0.33 -0.31
10 AT3G44770 Protein of unknown function (DUF626) -0.61 0.32 -0.3
11 AT1G44910 pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A,
pre-mRNA-processing protein 40A		 -0.6 0.32 -0.3
12 AT3G13175 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 18 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G16400.1); Has 29 Blast hits to 29 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.32 -0.31
13 AT1G74320 Protein kinase superfamily protein 0.59 0.32 -0.3
14 AT4G03340 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.59 0.32 -0.33
15 AT5G39790 5'-AMP-activated protein kinase-related 0.58 0.32 -0.33
16 AT1G62850 Class I peptide chain release factor 0.58 0.32 -0.3
17 AT5G56460 Protein kinase superfamily protein -0.58 0.35 -0.29
18 AT1G60060 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 0.58 0.33 -0.33
19 AT1G78810 unknown protein; Has 75 Blast hits to 52 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2;
Plants - 66; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.58 0.3 -0.33
20 AT1G36020 BEST Arabidopsis thaliana protein match is: DEAD/DEAH box
RNA helicase family protein (TAIR:AT1G35530.1); Has 18
Blast hits to 18 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.32 -0.33
21 AT1G11270 F-box and associated interaction domains-containing protein 0.57 0.32 -0.33
22 AT1G69180 Plant-specific transcription factor YABBY family protein CRABS CLAW -0.57 0.32 -0.33
23 AT5G07510 glycine-rich protein 14 ARABIDOPSIS THALIANA GLYCINE-RICH
PROTEIN 4, ARABIDOPSIS THALIANA
GLYCINE-RICH PROTEIN 14,
GLYCINE-RICH PROTEIN 4,
glycine-rich protein 14		 -0.56 0.33 -0.32
24 AT4G25800 Calmodulin-binding protein -0.56 0.33 -0.31
25 AT1G69380 Protein of unknown function (DUF155) RETARDED ROOT GROWTH 0.56 0.34 -0.33
26 AT1G03840 C2H2 and C2HC zinc fingers superfamily protein Magpie -0.56 0.31 -0.31
27 AT5G42880 Plant protein of unknown function (DUF827) -0.56 0.32 -0.32
28 AT1G18910 zinc ion binding;zinc ion binding -0.56 0.34 -0.34
29 AT2G14800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44713.1); Has 41 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 7; Fungi - 2; Plants - 16; Viruses - 0; Other
Eukaryotes - 16 (source: NCBI BLink).		 -0.56 0.31 -0.32
30 AT5G43550 F-box associated ubiquitination effector family protein -0.56 0.3 -0.31
31 AT1G18180 Protein of unknown function (DUF1295) 0.56 0.33 -0.31
32 AT5G61580 phosphofructokinase 4 phosphofructokinase 4 0.55 0.32 -0.31
33 AT4G28700 ammonium transporter 1;4 ammonium transporter 1;4 0.55 0.31 -0.29
34 AT5G23710 DNA binding;DNA-directed RNA polymerases 0.54 0.31 -0.31
35 AT5G59120 subtilase 4.13 subtilase 4.13, subtilase 4.13 0.54 0.31 -0.31
36 AT1G60985 SCR-like 6 SCR-like 6 0.53 0.3 -0.3
37 AT3G62170 VANGUARD 1 homolog 2 VANGUARD 1 homolog 2 -0.53 0.31 -0.3
38 AT5G35090 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.53 0.32 -0.34
39 AT3G14950 tetratricopetide-repeat thioredoxin-like 2 tetratricopetide-repeat
thioredoxin-like 2		 0.53 0.32 -0.3
40 AT3G01620 beta-1,4-N-acetylglucosaminyltransferase family protein 0.53 0.33 -0.3
41 AT4G20050 Pectin lyase-like superfamily protein QUARTET 3 -0.53 0.32 -0.3
42 AT1G36230 unknown protein; Has 5786 Blast hits to 627 proteins in 69
species: Archae - 0; Bacteria - 5701; Metazoa - 46; Fungi -
22; Plants - 13; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.53 0.34 -0.31
43 AT1G25580 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 8, SUPPRESSOR OF GAMMA
RADIATION 1		 -0.52 0.29 -0.31
44 AT5G12100 pentatricopeptide (PPR) repeat-containing protein -0.52 0.31 -0.31
45 AT5G45220 Disease resistance protein (TIR-NBS-LRR class) family 0.52 0.32 -0.33
46 AT5G61720 Protein of unknown function (DUF1216) 0.52 0.31 -0.33
47 AT5G22730 F-box/RNI-like/FBD-like domains-containing protein 0.52 0.33 -0.31
48 AT4G36560 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.3 -0.3
49 AT5G51930 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 -0.52 0.33 -0.34
50 AT2G23740 nucleic acid binding;sequence-specific DNA binding
transcription factors;zinc ion binding		 0.52 0.32 -0.32
51 AT3G06000 RNI-like superfamily protein -0.51 0.3 -0.3
52 AT4G07600 transposable element gene -0.51 0.28 -0.3
53 AT1G61720 NAD(P)-binding Rossmann-fold superfamily protein BANYULS -0.51 0.33 -0.31
54 AT5G22980 serine carboxypeptidase-like 47 serine carboxypeptidase-like 47 -0.51 0.32 -0.3
55 AT5G61750 RmlC-like cupins superfamily protein -0.5 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
56 C0124 Isonicotinic acid - - - -0.64 0.47 -0.46
57 C0058 Arginine D,L-Arginine L-Arginine arginine degradation VI (arginase 2 pathway),
arginine degradation I (arginase pathway),
arginine biosynthesis I,
putrescine biosynthesis II,
nitric oxide biosynthesis I (in plants),
citrulline biosynthesis,
putrescine biosynthesis I,
tRNA charging,
arginine biosynthesis II (acetyl cycle),
citrulline-nitric oxide cycle,
urea cycle,
L-Ndelta-acetylornithine biosynthesis 		-0.51 0.32 -0.33 C0058