AT3G11945 : homogentisate prenyltransferase
Query Information
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AGICode AT3G11945
Description homogentisate prenyltransferase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G11945 homogentisate prenyltransferase homogentisate prenyltransferase,
homogentisate prenyltransferase,
PHYTOENE DESATURATION 2		 1 0.33 -0.32
2 AT4G33520 P-type ATP-ase 1 Arabidopsis thaliana heavy metal
ATPase 6, HEAVY METAL ATPASE 6,
P-type ATP-ase 1		 0.84 0.33 -0.32
3 AT1G04530 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 4 0.81 0.34 -0.32
4 AT5G18430 GDSL-like Lipase/Acylhydrolase superfamily protein 0.79 0.32 -0.3
5 AT1G79790 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 Arabidopsis thaliana chloroplast
FMN hydrolase 1, flavin
mononucleotide hydrolase 1		 0.78 0.32 -0.31
6 AT4G31530 NAD(P)-binding Rossmann-fold superfamily protein 0.78 0.33 -0.3
7 AT1G56500 haloacid dehalogenase-like hydrolase family protein 0.77 0.3 -0.31
8 AT2G01110 Sec-independent periplasmic protein translocase ALBINO AND PALE GREEN 2, PGA2,
TWIN-ARGININE TRANSLOCATION C,
unfertilized embryo sac 3		 0.77 0.35 -0.3
9 AT1G32070 nuclear shuttle interacting nuclear shuttle interacting,
nuclear shuttle interacting		 0.76 0.32 -0.32
10 AT3G17350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G50290.1); Has 203 Blast hits to 203 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.76 0.32 -0.33
11 AT1G33930 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.76 0.31 -0.3
12 AT1G32220 NAD(P)-binding Rossmann-fold superfamily protein 0.76 0.32 -0.32
13 AT1G63170 Zinc finger, C3HC4 type (RING finger) family protein 0.75 0.32 -0.31
14 AT5G03040 IQ-domain 2 IQ-domain 2 0.75 0.32 -0.32
15 AT3G01920 DHBP synthase RibB-like alpha/beta domain 0.75 0.3 -0.35
16 AT1G53790 F-box and associated interaction domains-containing protein -0.75 0.33 -0.32
17 AT4G16140 proline-rich family protein 0.75 0.3 -0.3
18 AT4G32590 2Fe-2S ferredoxin-like superfamily protein 0.74 0.3 -0.32
19 AT1G77490 thylakoidal ascorbate peroxidase thylakoidal ascorbate peroxidase 0.74 0.34 -0.32
20 AT4G17040 CLP protease R subunit 4 CLP protease R subunit 4, happy on
norflurazon 5		 0.74 0.31 -0.32
21 AT4G25370 Double Clp-N motif protein 0.74 0.32 -0.3
22 AT2G14260 proline iminopeptidase proline iminopeptidase 0.73 0.3 -0.33
23 AT1G04110 Subtilase family protein STOMATAL DENSITY AND DISTRIBUTION 0.73 0.31 -0.3
24 AT3G06750 hydroxyproline-rich glycoprotein family protein 0.73 0.31 -0.3
25 AT1G09795 ATP phosphoribosyl transferase 2 ATP phosphoribosyl transferase 2,
ATP phosphoribosyl transferase 2,
HISN1B		 0.73 0.3 -0.31
26 AT1G68000 phosphatidylinositol synthase 1 PHOSPHATIDYLINOSITOL SYNTHASE,
phosphatidylinositol synthase 1,
phosphatidylinositol synthase 1		 0.73 0.32 -0.3
27 AT5G20060 alpha/beta-Hydrolases superfamily protein 0.73 0.32 -0.32
28 AT2G18245 alpha/beta-Hydrolases superfamily protein 0.73 0.33 -0.32
29 AT4G16240 unknown protein; Has 17010 Blast hits to 4557 proteins in
509 species: Archae - 32; Bacteria - 2889; Metazoa - 6537;
Fungi - 648; Plants - 4769; Viruses - 447; Other Eukaryotes
- 1688 (source: NCBI BLink).		 -0.73 0.33 -0.32
30 AT5G14970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits
to 397 proteins in 95 species: Archae - 0; Bacteria - 294;
Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other
Eukaryotes - 199 (source: NCBI BLink).		 0.73 0.31 -0.31
31 AT3G01860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to cadmium ion; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast
hits to 66 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.32 -0.33
32 AT1G20090 RHO-related protein from plants 2 Arabidopsis RAC-like 4, ATRAC4,
ATROP2, RHO-related protein from
plants 2		 0.73 0.31 -0.32
33 AT3G09980 Family of unknown function (DUF662) 0.72 0.33 -0.32
34 AT1G73530 RNA-binding (RRM/RBD/RNP motifs) family protein 0.72 0.32 -0.31
35 AT1G33811 GDSL-like Lipase/Acylhydrolase superfamily protein 0.72 0.3 -0.32
36 AT1G80080 Leucine-rich repeat (LRR) family protein Receptor Like Protein 17, TOO MANY
MOUTHS		 0.72 0.31 -0.3
37 AT5G54530 Protein of unknown function, DUF538 0.72 0.29 -0.32
38 AT3G57160 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.72 0.31 -0.33
39 AT5G06430 Thioredoxin superfamily protein 0.72 0.31 -0.34
40 AT5G60880 breaking of asymmetry in the stomatal lineage BREAKING OF ASYMMETRY IN THE
STOMATAL LINEAGE		 0.71 0.3 -0.32
41 AT2G17340 Uncharacterised conserved protein (UCP030210) 0.71 0.31 -0.3
42 AT1G11750 CLP protease proteolytic subunit 6 CLP protease proteolytic subunit
6, NUCLEAR-ENCODED CLPP 1, NCLPP6		 0.71 0.3 -0.31
43 AT4G34600 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: pollen tube growth; LOCATED IN: endomembrane
system; EXPRESSED IN: 11 plant structures; EXPRESSED
DURING: M germinated pollen stage, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT2G16385.1); Has 17 Blast hits to 17
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.71 0.33 -0.31
44 AT2G01870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
Has 11 Blast hits to 11 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.32 -0.3
45 AT2G34610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits
to 279 proteins in 74 species: Archae - 0; Bacteria - 7;
Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.7 0.32 -0.32
46 AT2G31040 ATP synthase protein I -related 0.7 0.31 -0.31
47 AT5G20140 SOUL heme-binding family protein 0.7 0.32 -0.32
48 AT5G67370 Protein of unknown function (DUF1230) 0.7 0.31 -0.33
49 AT1G33240 GT-2-like 1 GT2-LIKE 1, GT-2-like 1 0.7 0.32 -0.34
50 AT1G03440 Leucine-rich repeat (LRR) family protein 0.7 0.32 -0.31
51 AT2G30170 Protein phosphatase 2C family protein 0.7 0.3 -0.32
52 AT4G20760 NAD(P)-binding Rossmann-fold superfamily protein 0.7 0.3 -0.31
53 AT2G21600 endoplasmatic reticulum retrieval protein 1B endoplasmatic reticulum retrieval
protein 1B, endoplasmatic
reticulum retrieval protein 1B		 0.7 0.33 -0.32
54 AT1G61900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
anchored to plasma membrane, plasma membrane, anchored to
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G30700.1); Has 65 Blast
hits to 65 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.33 -0.32
55 AT1G64980 Nucleotide-diphospho-sugar transferases superfamily protein 0.69 0.33 -0.31
56 AT3G24140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 FAMA 0.69 0.34 -0.32
57 AT5G19250 Glycoprotein membrane precursor GPI-anchored 0.69 0.31 -0.32
58 AT3G12500 basic chitinase basic chitinase, B-CHI, CHI-B,
basic chitinase,
PATHOGENESIS-RELATED 3,
PATHOGENESIS-RELATED 3		 -0.68 0.31 -0.31
59 AT1G61810 beta-glucosidase 45 beta-glucosidase 45 -0.68 0.33 -0.31
60 AT3G03170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits
to 184 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.35 -0.29
61 AT2G45290 Transketolase -0.68 0.32 -0.31
62 AT5G58940 calmodulin-binding receptor-like cytoplasmic kinase 1 calmodulin-binding receptor-like
cytoplasmic kinase 1		 -0.68 0.33 -0.33
63 AT4G22770 AT hook motif DNA-binding family protein -0.68 0.32 -0.32
64 AT3G14360 alpha/beta-Hydrolases superfamily protein -0.67 0.31 -0.35
65 AT3G14280 unknown protein; Has 51 Blast hits to 51 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.35 -0.32
66 AT1G68270 AMP-dependent synthetase and ligase family protein -0.66 0.32 -0.31
67 AT1G59650 Protein of unknown function (DUF1336) CW14 -0.66 0.33 -0.31
68 AT4G38440 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: RNA polymerase II-associated protein 1,
C-terminal (InterPro:IPR013929), RNA polymerase
II-associated protein 1, N-terminal (InterPro:IPR013930);
Has 276 Blast hits to 220 proteins in 102 species: Archae -
0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 MINIYO -0.65 0.3 -0.31
69 AT2G46950 cytochrome P450, family 709, subfamily B, polypeptide 2 cytochrome P450, family 709,
subfamily B, polypeptide 2		 -0.65 0.31 -0.32
70 AT3G46500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.65 0.3 -0.31
71 AT3G24400 pseudogene, protein kinase family, contains Pfam PF00069:
Protein kinase domain; blastp match of 72% identity and
1.7e-148 P-value to GP|13397640|emb|CAC34703.1||AX088876
unnamed protein product {Brassica napus}		 proline-rich extensin-like
receptor kinase 2, proline-rich
extensin-like receptor kinase 2		 -0.65 0.31 -0.32
72 AT1G04120 multidrug resistance-associated protein 5 ATP-binding cassette C5,
Arabidopsis thaliana ATP-binding
cassette C5, multidrug
resistance-associated protein 5,
MULTIDRUG RESISTANCE PROTEIN 5,
multidrug resistance-associated
protein 5		 -0.64 0.32 -0.31
73 AT2G24260 LJRHL1-like 1 LJRHL1-like 1 -0.64 0.34 -0.3
74 AT1G55610 BRI1 like BRI1 like -0.64 0.33 -0.32
75 AT1G68320 myb domain protein 62 myb domain protein 62, BW62B,
BW62C, myb domain protein 62		 -0.64 0.33 -0.34
76 AT3G11050 ferritin 2 ferritin 2, ferritin 2 -0.63 0.32 -0.3
77 AT1G15310 signal recognition particle 54 kDa subunit signal recognition particle 54 kDa
subunit, SIGNAL RECOGNITION
PARTICLE 54 KDA SUBUNIT		 -0.63 0.32 -0.32
78 AT1G78960 lupeol synthase 2 lupeol synthase 2, lupeol synthase
2		 -0.63 0.31 -0.31
79 AT2G25000 WRKY DNA-binding protein 60 ATWRKY60, WRKY DNA-binding protein
60		 -0.63 0.33 -0.31
80 AT1G76930 extensin 4 EXTENSIN 1, extensin 4, extensin
1, extensin 4, OBP3-RESPONSIVE
GENE 5		 -0.63 0.31 -0.31
81 AT1G48130 1-cysteine peroxiredoxin 1 1-cysteine peroxiredoxin 1,
1-cysteine peroxiredoxin 1		 -0.62 0.37 -0.3
82 AT3G14395 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.32 -0.31
83 ATMG01360 cytochrome oxidase cytochrome oxidase -0.62 0.32 -0.33
84 AT5G59305 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.62 0.33 -0.33
85 AT5G51160 Ankyrin repeat family protein -0.62 0.31 -0.32
86 AT5G12330 Lateral root primordium (LRP) protein-related LATERAL ROOT PRIMORDIUM 1 -0.62 0.31 -0.32
87 AT2G41070 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP12, DPBF4, ENHANCED EM LEVEL -0.62 0.32 -0.3
88 AT5G43780 Pseudouridine synthase/archaeosine transglycosylase-like
family protein		 APS4 -0.61 0.32 -0.32
89 ATMG00670 hypothetical protein ORF275 -0.61 0.32 -0.31
90 AT1G50760 Aminotransferase-like, plant mobile domain family protein -0.61 0.32 -0.32
91 AT1G69430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits
to 215 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.32 -0.33
92 AT2G10760 transposable element gene -0.6 0.32 -0.3
93 AT2G40900 nodulin MtN21 /EamA-like transporter family protein -0.6 0.31 -0.3
94 AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein -0.6 0.31 -0.32
95 AT3G16030 lectin protein kinase family protein CALLUS EXPRESSION OF RBCS 101 -0.6 0.33 -0.32
96 AT3G15720 Pectin lyase-like superfamily protein -0.59 0.33 -0.32
97 AT3G27473 Cysteine/Histidine-rich C1 domain family protein -0.58 0.32 -0.33
98 AT1G22960 Pentatricopeptide repeat (PPR) superfamily protein -0.58 0.32 -0.32
99 AT4G14840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22520.1); Has 1681 Blast hits
to 1532 proteins in 283 species: Archae - 19; Bacteria -
179; Metazoa - 579; Fungi - 131; Plants - 223; Viruses - 5;
Other Eukaryotes - 545 (source: NCBI BLink).		 -0.58 0.31 -0.33
100 AT4G35500 Protein kinase superfamily protein -0.58 0.34 -0.31
101 AT3G20100 cytochrome P450, family 705, subfamily A, polypeptide 19 cytochrome P450, family 705,
subfamily A, polypeptide 19		 -0.58 0.32 -0.3
102 AT3G53210 nodulin MtN21 /EamA-like transporter family protein -0.58 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
103 C0253 Threonic acid-1,4-lactone D,L-Threonic acid-1,4-lactone - - 0.8 0.45 -0.44