AGICode | AT3G04720 |
Description | pathogenesis-related 4 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G04720 | pathogenesis-related 4 | HEVEIN-LIKE, PR-4, pathogenesis-related 4 |
1 | 0.31 | -0.29 | ||
2 | AT4G16260 | Glycosyl hydrolase superfamily protein | 0.83 | 0.34 | -0.32 | |||
3 | AT1G06160 | octadecanoid-responsive Arabidopsis AP2/ERF 59 | octadecanoid-responsive Arabidopsis AP2/ERF 59 |
0.8 | 0.32 | -0.31 | ||
4 | AT2G38860 | Class I glutamine amidotransferase-like superfamily protein | YLS5 | 0.76 | 0.32 | -0.32 | ||
5 | AT2G44910 | homeobox-leucine zipper protein 4 | ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4, homeobox-leucine zipper protein 4, homeobox-leucine zipper protein 4 |
-0.75 | 0.33 | -0.33 | ||
6 | AT2G01930 | basic pentacysteine1 | BASIC PENTACYSTEINE1, BBR, basic pentacysteine1 |
-0.74 | 0.33 | -0.31 | ||
7 | AT1G50300 | TBP-associated factor 15 | TBP-associated factor 15 | -0.73 | 0.32 | -0.31 | ||
8 | AT3G11490 | rac GTPase activating protein | -0.73 | 0.33 | -0.31 | |||
9 | AT3G61260 | Remorin family protein | -0.72 | 0.35 | -0.3 | |||
10 | AT5G36880 | acetyl-CoA synthetase | acetyl-CoA synthetase | 0.72 | 0.3 | -0.3 | ||
11 | AT4G36530 | alpha/beta-Hydrolases superfamily protein | -0.71 | 0.3 | -0.32 | |||
12 | AT4G08330 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17705.1); Has 98 Blast hits to 98 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.71 | 0.32 | -0.32 | |||
13 | AT4G31140 | O-Glycosyl hydrolases family 17 protein | -0.71 | 0.34 | -0.3 | |||
14 | AT1G30440 | Phototropic-responsive NPH3 family protein | -0.71 | 0.33 | -0.3 | |||
15 | AT3G53180 | glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases |
nodulin/glutamine synthase-like protein |
0.71 | 0.3 | -0.32 | ||
16 | AT4G08770 | Peroxidase superfamily protein | peroxidase 37 | 0.7 | 0.31 | -0.31 | ||
17 | AT5G55560 | Protein kinase superfamily protein | 0.69 | 0.31 | -0.29 | |||
18 | AT2G31230 | ethylene-responsive element binding factor 15 | ethylene-responsive element binding factor 15, ethylene-responsive element binding factor 15 |
0.69 | 0.33 | -0.32 | ||
19 | AT5G53550 | YELLOW STRIPE like 3 | YELLOW STRIPE LIKE 3, YELLOW STRIPE like 3 |
0.69 | 0.31 | -0.32 | ||
20 | AT3G28930 | AIG2-like (avirulence induced gene) family protein | AVRRPT2-INDUCED GENE 2 | 0.69 | 0.33 | -0.31 | ||
21 | AT3G12500 | basic chitinase | basic chitinase, B-CHI, CHI-B, basic chitinase, PATHOGENESIS-RELATED 3, PATHOGENESIS-RELATED 3 |
0.68 | 0.31 | -0.31 | ||
22 | AT5G11670 | NADP-malic enzyme 2 | Arabidopsis thaliana NADP-malic enzyme 2, NADP-malic enzyme 2 |
0.68 | 0.32 | -0.3 | ||
23 | AT5G44420 | plant defensin 1.2 | LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 77, plant defensin 1.2, PLANT DEFENSIN 1.2A |
0.68 | 0.3 | -0.3 | ||
24 | AT2G45290 | Transketolase | 0.68 | 0.31 | -0.32 | |||
25 | AT2G26020 | plant defensin 1.2b | plant defensin 1.2b | 0.68 | 0.3 | -0.3 | ||
26 | AT1G43910 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.68 | 0.32 | -0.33 | |||
27 | AT3G28940 | AIG2-like (avirulence induced gene) family protein | 0.67 | 0.33 | -0.3 | |||
28 | AT2G39030 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | N-acetyltransferase activity 1 | 0.67 | 0.3 | -0.31 | ||
29 | AT3G29970 | B12D protein | 0.67 | 0.31 | -0.32 | |||
30 | AT4G27300 | S-locus lectin protein kinase family protein | 0.67 | 0.31 | -0.32 | |||
31 | AT3G42170 | BED zinc finger ;hAT family dimerisation domain | -0.67 | 0.31 | -0.31 | |||
32 | AT5G45250 | Disease resistance protein (TIR-NBS-LRR class) family | RESISTANT TO P. SYRINGAE 4 | 0.67 | 0.3 | -0.32 | ||
33 | AT3G50740 | UDP-glucosyl transferase 72E1 | UDP-glucosyl transferase 72E1 | 0.67 | 0.31 | -0.3 | ||
34 | AT3G26590 | MATE efflux family protein | 0.66 | 0.3 | -0.31 | |||
35 | AT5G65640 | beta HLH protein 93 | beta HLH protein 93 | 0.66 | 0.31 | -0.3 | ||
36 | AT1G51890 | Leucine-rich repeat protein kinase family protein | 0.66 | 0.3 | -0.31 | |||
37 | AT5G11530 | embryonic flower 1 (EMF1) | embryonic flower 1 | -0.66 | 0.3 | -0.29 | ||
38 | AT1G56010 | NAC domain containing protein 1 | Arabidopsis NAC domain containing protein 21, Arabidopsis NAC domain containing protein 22, NAC domain containing protein 1 |
0.66 | 0.31 | -0.3 | ||
39 | AT3G09490 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.66 | 0.3 | -0.33 | |||
40 | AT5G55170 | small ubiquitin-like modifier 3 | ATSUMO3, SMALL UBIQUITIN-LIKE MODIFIER 3, SMALL UBIQUITIN-LIKE MODIFIER 3, small ubiquitin-like modifier 3 |
0.66 | 0.31 | -0.29 | ||
41 | AT5G04590 | sulfite reductase | sulfite reductase | 0.66 | 0.31 | -0.32 | ||
42 | AT3G52710 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36220.1); Has 64 Blast hits to 64 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.65 | 0.34 | -0.33 | |||
43 | AT1G43800 | Plant stearoyl-acyl-carrier-protein desaturase family protein |
0.65 | 0.32 | -0.32 | |||
44 | AT1G80830 | natural resistance-associated macrophage protein 1 | ATNRAMP1, natural resistance-associated macrophage protein 1, PMIT1 |
0.65 | 0.31 | -0.33 | ||
45 | AT1G25275 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 18 Blast hits to 18 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.65 | 0.32 | -0.32 | |||
46 | AT1G79990 | structural molecules | -0.65 | 0.32 | -0.32 | |||
47 | AT4G20110 | VACUOLAR SORTING RECEPTOR 7 | binding protein of 80 kDa 3;1, VACUOLAR SORTING RECEPTOR 3;1, VACUOLAR SORTING RECEPTOR 7 |
0.65 | 0.29 | -0.32 | ||
48 | AT5G15330 | SPX domain gene 4 | ARABIDOPSIS THALIANA SPX DOMAIN GENE 4, SPX domain gene 4 |
-0.65 | 0.31 | -0.34 | ||
49 | AT3G09020 | alpha 1,4-glycosyltransferase family protein | 0.64 | 0.3 | -0.33 | |||
50 | AT1G01900 | subtilase family protein | ATSBT1.1, SBTI1.1 | -0.64 | 0.31 | -0.32 | ||
51 | AT4G10380 | NOD26-like intrinsic protein 5;1 | AtNIP5;1, NOD26-like intrinsic protein 5;1, NOD26-LIKE MIP 6, NOD26-LIKE MIP 8 |
0.64 | 0.34 | -0.3 | ||
52 | AT5G13300 | ARF GTPase-activating protein | ARF-GAP DOMAIN3, SCARFACE, ASCULAR NETWORK DEFECTIVE 3 |
-0.64 | 0.33 | -0.32 | ||
53 | AT4G10910 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.63 | 0.29 | -0.32 | |||
54 | AT3G19340 | Protein of unknown function (DUF3754) | -0.63 | 0.35 | -0.31 | |||
55 | AT5G15680 | ARM repeat superfamily protein | -0.63 | 0.33 | -0.32 | |||
56 | AT1G15790 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.63 | 0.3 | -0.32 | |||
57 | AT3G06450 | HCO3- transporter family | 0.63 | 0.33 | -0.33 | |||
58 | AT1G12930 | ARM repeat superfamily protein | -0.63 | 0.31 | -0.35 | |||
59 | AT4G09150 | T-complex protein 11 | -0.63 | 0.32 | -0.32 | |||
60 | AT1G59960 | NAD(P)-linked oxidoreductase superfamily protein | 0.63 | 0.3 | -0.32 | |||
61 | AT5G17300 | Homeodomain-like superfamily protein | REVEILLE 1 | -0.63 | 0.29 | -0.32 | ||
62 | AT1G22310 | methyl-CPG-binding domain 8 | ATMBD8, methyl-CPG-binding domain 8 |
-0.63 | 0.32 | -0.32 | ||
63 | AT1G18700 | DNAJ heat shock N-terminal domain-containing protein | -0.62 | 0.31 | -0.3 | |||
64 | AT4G32650 | potassium channel in Arabidopsis thaliana 3 | ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1, A. thaliana low-K+-tolerant 1, potassium channel in Arabidopsis thaliana 3, KC1 |
0.62 | 0.31 | -0.3 | ||
65 | AT1G79400 | cation/H+ exchanger 2 | cation/H+ exchanger 2, cation/H+ exchanger 2 |
0.62 | 0.34 | -0.31 | ||
66 | AT1G70140 | formin 8 | formin 8, formin 8 | 0.62 | 0.31 | -0.32 | ||
67 | AT5G07830 | glucuronidase 2 | glucuronidase 2, glucuronidase 2 | 0.61 | 0.3 | -0.32 | ||
68 | AT5G02840 | LHY/CCA1-like 1 | LHY/CCA1-like 1 | -0.61 | 0.3 | -0.33 | ||
69 | AT3G12470 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.61 | 0.31 | -0.31 | |||
70 | AT1G21310 | extensin 3 | extensin 3, extensin 3, ROOT-SHOOT-HYPOCOTYL DEFECTIVE |
0.61 | 0.31 | -0.32 | ||
71 | AT1G76930 | extensin 4 | EXTENSIN 1, extensin 4, extensin 1, extensin 4, OBP3-RESPONSIVE GENE 5 |
0.61 | 0.3 | -0.32 | ||
72 | AT3G50780 | BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G63850.1); Has 298 Blast hits to 298 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 287; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.61 | 0.32 | -0.31 | |||
73 | AT5G44820 | Nucleotide-diphospho-sugar transferase family protein | 0.61 | 0.31 | -0.33 | |||
74 | AT1G13750 | Purple acid phosphatases superfamily protein | 0.61 | 0.3 | -0.33 | |||
75 | AT3G57630 | exostosin family protein | 0.61 | 0.33 | -0.33 | |||
76 | AT3G06650 | ATP-citrate lyase B-1 | ATP-citrate lyase B-1 | -0.6 | 0.31 | -0.33 | ||
77 | AT5G17070 | CONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.6 | 0.31 | -0.32 | |||
78 | AT4G01120 | G-box binding factor 2 | BASIC REGION/LEUCINE ZIPPER MOTIF 5, G-box binding factor 2 |
-0.6 | 0.33 | -0.31 | ||
79 | AT5G45380 | solute:sodium symporters;urea transmembrane transporters | ATDUR3, DEGRADATION OF UREA 3 | 0.6 | 0.29 | -0.31 | ||
80 | AT1G03370 | C2 calcium/lipid-binding and GRAM domain containing protein | 0.6 | 0.31 | -0.33 | |||
81 | AT4G16650 | O-fucosyltransferase family protein | -0.6 | 0.33 | -0.32 | |||
82 | AT3G21630 | chitin elicitor receptor kinase 1 | chitin elicitor receptor kinase 1, LYSM DOMAIN RECEPTOR-LIKE KINASE 1 |
0.6 | 0.32 | -0.3 | ||
83 | AT3G13090 | multidrug resistance-associated protein 8 | ATP-binding cassette C6, multidrug resistance-associated protein 8, multidrug resistance-associated protein 8 |
0.6 | 0.3 | -0.31 | ||
84 | AT1G69010 | BES1-interacting Myc-like protein 2 | BES1-interacting Myc-like protein 2 |
-0.6 | 0.3 | -0.32 | ||
85 | AT5G61160 | anthocyanin 5-aromatic acyltransferase 1 | anthocyanin 5-aromatic acyltransferase 1 |
0.6 | 0.33 | -0.31 | ||
86 | AT5G60460 | Preprotein translocase Sec, Sec61-beta subunit protein | 0.6 | 0.33 | -0.32 | |||
87 | AT1G17370 | oligouridylate binding protein 1B | oligouridylate binding protein 1B | -0.6 | 0.29 | -0.3 | ||
88 | AT2G19130 | S-locus lectin protein kinase family protein | 0.59 | 0.31 | -0.32 | |||
89 | AT1G66150 | transmembrane kinase 1 | transmembrane kinase 1 | -0.59 | 0.32 | -0.33 | ||
90 | ATCG00360 | Tetratricopeptide repeat (TPR)-like superfamily protein | YCF3 | -0.59 | 0.32 | -0.3 | ||
91 | AT2G40930 | ubiquitin-specific protease 5 | ATUBP5, PIGMENT DEFECTIVE EMBRYO 323, ubiquitin-specific protease 5 |
-0.59 | 0.29 | -0.33 | ||
92 | AT3G62660 | galacturonosyltransferase-like 7 | galacturonosyltransferase-like 7 | -0.59 | 0.3 | -0.31 | ||
93 | AT5G19810 | Proline-rich extensin-like family protein | -0.59 | 0.29 | -0.31 | |||
94 | AT2G45660 | AGAMOUS-like 20 | AGAMOUS-like 20, SUPPRESSOR OF OVEREXPRESSION OF CO 1, SUPPRESSOR OF OVEREXPRESSION OF CO 1 |
-0.59 | 0.32 | -0.3 | ||
95 | AT4G31360 | selenium binding | -0.59 | 0.31 | -0.29 | |||
96 | AT5G05460 | Glycosyl hydrolase family 85 | AtENGase85A, Endo-beta-N-acetyglucosaminidase 85A |
0.59 | 0.31 | -0.32 | ||
97 | AT4G32540 | Flavin-binding monooxygenase family protein | YUCCA, YUCCA 1 | -0.59 | 0.3 | -0.31 | ||
98 | AT1G15940 | Tudor/PWWP/MBT superfamily protein | -0.59 | 0.31 | -0.36 | |||
99 | AT5G61520 | Major facilitator superfamily protein | 0.59 | 0.3 | -0.29 | |||
100 | AT3G03880 | Protein of unknown function (DUF1639) | -0.59 | 0.32 | -0.32 | |||
101 | AT1G31820 | Amino acid permease family protein | 0.59 | 0.31 | -0.3 | |||
102 | AT5G04240 | Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein |
EARLY FLOWERING 6 | -0.59 | 0.33 | -0.3 | ||
103 | AT1G67510 | Leucine-rich repeat protein kinase family protein | -0.59 | 0.32 | -0.32 | |||
104 | AT5G45980 | WUSCHEL related homeobox 8 | STIMPY-LIKE, WUSCHEL related homeobox 8, WUSCHEL related homeobox 9B |
0.58 | 0.32 | -0.3 | ||
105 | AT4G32190 | Myosin heavy chain-related protein | -0.58 | 0.32 | -0.32 | |||
106 | AT4G02050 | sugar transporter protein 7 | sugar transporter protein 7 | 0.58 | 0.3 | -0.32 | ||
107 | AT2G27110 | FAR1-related sequence 3 | FAR1-related sequence 3 | -0.58 | 0.32 | -0.3 | ||
108 | ATCG00380 | chloroplast ribosomal protein S4 | chloroplast ribosomal protein S4 | -0.58 | 0.33 | -0.31 | ||
109 | AT2G30800 | helicase in vascular tissue and tapetum | ATVT-1, helicase in vascular tissue and tapetum |
-0.57 | 0.31 | -0.3 | ||
110 | AT5G63580 | flavonol synthase 2 | ATFLS2, flavonol synthase 2 | 0.57 | 0.3 | -0.33 | ||
111 | AT1G19710 | UDP-Glycosyltransferase superfamily protein | 0.57 | 0.32 | -0.31 | |||
112 | AT4G35780 | ACT-like protein tyrosine kinase family protein | serine/threonine/tyrosine kinase 17 |
-0.57 | 0.32 | -0.31 | ||
113 | AT5G18410 | transcription activators | ATSRA1, KLUNKER, PIROGI, PIROGI 121, PIRP, SRA1 |
-0.57 | 0.31 | -0.31 | ||
114 | AT3G55400 | methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (cpMetRS) |
OVULE ABORTION 1 | -0.57 | 0.3 | -0.32 | ||
115 | AT2G45530 | RING/U-box superfamily protein | -0.57 | 0.32 | -0.32 | |||
116 | AT5G56250 | hapless 8 | HAPLESS 8 | 0.57 | 0.32 | -0.31 | ||
117 | AT4G17000 | unknown protein; Has 2862 Blast hits to 2331 proteins in 349 species: Archae - 6; Bacteria - 408; Metazoa - 833; Fungi - 223; Plants - 134; Viruses - 7; Other Eukaryotes - 1251 (source: NCBI BLink). |
-0.57 | 0.29 | -0.31 | |||
118 | AT1G10640 | Pectin lyase-like superfamily protein | -0.56 | 0.29 | -0.31 | |||
119 | AT5G49320 | Protein of unknown function (DUF1218) | 0.56 | 0.32 | -0.32 | |||
120 | AT5G18580 | tonneau 2 (TON2) | EMBRYO DEFECTIVE 40, FASS 1, FASS 2, FS1, GORDO, TONNEAU 2 |
-0.56 | 0.3 | -0.31 | ||
121 | ATCG00170 | DNA-directed RNA polymerase family protein | RPOC2 | -0.56 | 0.32 | -0.32 | ||
122 | AT2G28880 | para-aminobenzoate (PABA) synthase family protein | aminodeoxychorismate synthase, embryo defective 1997 |
-0.56 | 0.31 | -0.3 | ||
123 | AT2G27740 | Family of unknown function (DUF662) | -0.56 | 0.3 | -0.29 | |||
124 | AT2G38110 | glycerol-3-phosphate acyltransferase 6 | GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6, glycerol-3-phosphate acyltransferase 6 |
-0.56 | 0.29 | -0.29 | ||
125 | AT4G28500 | NAC domain containing protein 73 | NAC domain containing protein 73, NAC domain containing protein 73, SECONDARY WALL-ASSOCIATED NAC DOMAIN PROTEIN 2 |
-0.56 | 0.33 | -0.31 | ||
126 | AT4G33330 | plant glycogenin-like starch initiation protein 3 | glucuronic acid substitution of xylan 2, plant glycogenin-like starch initiation protein 3 |
-0.56 | 0.31 | -0.3 | ||
127 | AT4G25430 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G51850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.56 | 0.31 | -0.32 | |||
128 | AT3G20070 | titan9 | TITAN9 | -0.56 | 0.3 | -0.33 | ||
129 | ATCG00190 | RNA polymerase subunit beta | RNA polymerase subunit beta | -0.55 | 0.3 | -0.32 | ||
130 | AT2G19150 | Pectin lyase-like superfamily protein | -0.55 | 0.31 | -0.29 | |||
131 | AT5G36250 | Protein phosphatase 2C family protein | -0.55 | 0.33 | -0.29 | |||
132 | AT3G15520 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
-0.55 | 0.31 | -0.32 | |||
133 | AT1G72050 | transcription factor IIIA | transcription factor IIIA | -0.55 | 0.33 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
134 | C0256 | Tryptamine | - | Tryptamine | IAA biosynthesis I | -0.66 | 0.47 | -0.44 | ||
135 | C0035 | 4-Methoxyindol-3-ylmethylglucosinolate | - | 4-Methoxy-3-indolylmethyl glucosinolate | glucosinolate biosynthesis from tryptophan, indole glucosinolate breakdown (active in intact plant cell) |
0.64 | 0.43 | -0.43 |