AT3G04770 : 40s ribosomal protein SA B
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G04770
Description 40s ribosomal protein SA B
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G04770 40s ribosomal protein SA B 40s ribosomal protein SA B 1 0.31 -0.31
2 AT3G23940 dehydratase family 0.88 0.32 -0.29
3 AT3G16780 Ribosomal protein L19e family protein 0.88 0.33 -0.34
4 AT2G23350 poly(A) binding protein 4 poly(A) binding protein 4, POLY(A)
BINDING PROTEIN 4		 0.88 0.31 -0.29
5 AT5G67510 Translation protein SH3-like family protein 0.87 0.31 -0.32
6 AT5G47210 Hyaluronan / mRNA binding family 0.87 0.3 -0.31
7 AT4G25890 60S acidic ribosomal protein family 0.86 0.3 -0.32
8 AT3G62120 Class II aaRS and biotin synthetases superfamily protein 0.86 0.31 -0.34
9 AT3G18130 receptor for activated C kinase 1C receptor for activated C kinase
1C, receptor for activated C
kinase 1C		 0.86 0.32 -0.34
10 AT1G15810 S15/NS1, RNA-binding protein 0.85 0.33 -0.33
11 AT1G52300 Zinc-binding ribosomal protein family protein 0.85 0.32 -0.32
12 AT1G17560 Ribosomal protein L14p/L23e family protein HUELLENLOS 0.85 0.3 -0.31
13 AT1G24280 glucose-6-phosphate dehydrogenase 3 glucose-6-phosphate dehydrogenase
3		 0.85 0.29 -0.32
14 AT3G44750 histone deacetylase 3 ATHD2A, HISTONE DEACETYLASE 2A,
histone deacetylase 3, HDT1		 0.85 0.29 -0.3
15 AT3G49590 Autophagy-related protein 13 autophagy-related 13 -0.85 0.32 -0.33
16 AT3G07110 Ribosomal protein L13 family protein 0.85 0.3 -0.32
17 AT4G25740 RNA binding Plectin/S10 domain-containing protein 0.85 0.31 -0.31
18 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 0.85 0.33 -0.31
19 AT4G17520 Hyaluronan / mRNA binding family 0.84 0.33 -0.31
20 AT2G36170 Ubiquitin supergroup;Ribosomal protein L40e 0.84 0.32 -0.3
21 AT3G58700 Ribosomal L5P family protein 0.84 0.32 -0.31
22 AT3G16080 Zinc-binding ribosomal protein family protein 0.84 0.32 -0.34
23 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8		 0.84 0.32 -0.32
24 AT3G09630 Ribosomal protein L4/L1 family 0.84 0.33 -0.31
25 AT3G06700 Ribosomal L29e protein family 0.84 0.3 -0.31
26 AT3G13230 RNA-binding KH domain-containing protein 0.84 0.31 -0.31
27 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 0.83 0.31 -0.31
28 AT3G57490 Ribosomal protein S5 family protein 0.83 0.33 -0.29
29 AT3G44590 60S acidic ribosomal protein family 0.83 0.32 -0.31
30 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B 0.83 0.29 -0.31
31 AT3G06610 DNA-binding enhancer protein-related 0.83 0.33 -0.32
32 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4		 0.83 0.33 -0.33
33 AT5G59850 Ribosomal protein S8 family protein 0.83 0.32 -0.31
34 AT2G22430 homeobox protein 6 homeobox protein 6, homeobox
protein 6		 -0.83 0.3 -0.33
35 AT2G34260 transducin family protein / WD-40 repeat family protein human WDR55 (WD40 repeat) homolog 0.82 0.31 -0.33
36 AT3G49100 Signal recognition particle, SRP9/SRP14 subunit 0.81 0.32 -0.3
37 AT1G15930 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.81 0.33 -0.31
38 AT2G33370 Ribosomal protein L14p/L23e family protein 0.81 0.31 -0.29
39 AT1G28960 nudix hydrolase homolog 15 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 15, nudix
hydrolase homolog 15, nudix
hydrolase homolog 15		 -0.81 0.3 -0.33
40 AT1G79650 Rad23 UV excision repair protein family Arabidopsis thaliana aldehyde
oxidase 1, RADIATION SENSITIVE23B		 0.81 0.33 -0.32
41 AT2G40290 Eukaryotic translation initiation factor 2 subunit 1 0.81 0.32 -0.33
42 AT2G25625 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; Has 24 Blast hits to 24 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.8 0.32 -0.31
43 AT4G05400 copper ion binding 0.8 0.3 -0.32
44 AT4G38100 unknown protein; LOCATED IN: chloroplast thylakoid
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G01150.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.8 0.32 -0.32
45 AT3G55010 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast
/ phosphoribosyl-aminoimidazole synthetase / AIR synthase
(PUR5)		 ATPURM, EMBRYO DEFECTIVE 2818,
PUR5		 0.8 0.31 -0.31
46 AT1G48630 receptor for activated C kinase 1B receptor for activated C kinase
1B, receptor for activated C
kinase 1B		 0.8 0.32 -0.34
47 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 0.8 0.31 -0.33
48 AT5G12980 Cell differentiation, Rcd1-like protein 0.8 0.32 -0.31
49 AT3G10250 Plant protein 1589 of unknown function -0.79 0.31 -0.33
50 AT1G61580 R-protein L3 B ARABIDOPSIS RIBOSOMAL PROTEIN 2,
R-protein L3 B		 0.79 0.32 -0.3
51 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.79 0.31 -0.31
52 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 -0.79 0.35 -0.32
53 AT4G28490 Leucine-rich receptor-like protein kinase family protein HAESA, RECEPTOR-LIKE PROTEIN
KINASE 5		 -0.79 0.31 -0.33
54 AT3G09770 RING/U-box superfamily protein LOSS OF GDU 2 -0.79 0.3 -0.34
55 AT4G30840 Transducin/WD40 repeat-like superfamily protein 0.79 0.33 -0.32
56 AT1G62310 transcription factor jumonji (jmjC) domain-containing
protein		 -0.78 0.33 -0.31
57 AT3G56070 rotamase cyclophilin 2 rotamase cyclophilin 2 0.78 0.31 -0.32
58 AT5G18640 alpha/beta-Hydrolases superfamily protein -0.78 0.32 -0.34
59 AT1G64880 Ribosomal protein S5 family protein 0.78 0.33 -0.33
60 AT1G17550 homology to ABI2 homology to ABI2 -0.78 0.32 -0.33
61 AT3G49180 Transducin/WD40 repeat-like superfamily protein ROOT INITIATION DEFECTIVE 3 0.78 0.31 -0.31
62 AT2G19480 nucleosome assembly protein 1;2 nucleosome assembly protein 1;2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 2		 0.78 0.3 -0.32
63 AT3G21270 DOF zinc finger protein 2 DOF zinc finger protein 2, DOF
zinc finger protein 2		 -0.78 0.31 -0.32
64 AT4G03030 Galactose oxidase/kelch repeat superfamily protein -0.78 0.31 -0.31
65 AT2G31660 ARM repeat superfamily protein enhanced miRNA activity 1, SUPER
SENSITIVE TO ABA AND DROUGHT2,
UNARMED 9		 0.78 0.31 -0.34
66 AT5G66050 Wound-responsive family protein -0.78 0.31 -0.34
67 AT1G66070 Translation initiation factor eIF3 subunit 0.77 0.31 -0.32
68 AT5G19300 CONTAINS InterPro DOMAIN/s: Nucleic acid-binding,
OB-fold-like (InterPro:IPR016027), Protein of unknown
function DUF171 (InterPro:IPR003750); Has 3649 Blast hits
to 1964 proteins in 291 species: Archae - 113; Bacteria -
121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses -
4; Other Eukaryotes - 1703 (source: NCBI BLink).		 0.77 0.33 -0.31
69 AT1G09830 Glycinamide ribonucleotide (GAR) synthetase 0.77 0.3 -0.28
70 AT3G53960 Major facilitator superfamily protein -0.77 0.31 -0.33
71 AT1G63660 GMP synthase (glutamine-hydrolyzing), putative / glutamine
amidotransferase, putative		 0.77 0.33 -0.33
72 AT4G20980 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 0.77 0.33 -0.29
73 AT2G35040 AICARFT/IMPCHase bienzyme family protein 0.77 0.31 -0.32
74 AT3G14050 RELA/SPOT homolog 2 RELA-SPOT HOMOLOG 2, RELA/SPOT
HOMOLOG 2, RELA/SPOT homolog 2		 -0.76 0.33 -0.31
75 AT5G38895 RING/U-box superfamily protein -0.76 0.3 -0.32
76 AT1G76380 DNA-binding bromodomain-containing protein -0.76 0.32 -0.3
77 AT1G64660 methionine gamma-lyase methionine gamma-lyase, methionine
gamma-lyase		 -0.76 0.32 -0.31
78 AT3G20300 Protein of unknown function (DUF3537) -0.76 0.31 -0.33
79 AT3G07360 plant U-box 9 ARABIDOPSIS THALIANA PLANT U-BOX
9, plant U-box 9		 -0.75 0.31 -0.3
80 AT2G17700 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase 8 -0.75 0.3 -0.31
81 AT2G46270 G-box binding factor 3 G-box binding factor 3 -0.75 0.34 -0.3
82 AT1G58360 amino acid permease 1 amino acid permease 1, NEUTRAL
AMINO ACID TRANSPORTER 2		 -0.75 0.32 -0.31
83 AT3G01560 Protein of unknown function (DUF1421) -0.75 0.33 -0.3
84 AT1G55280 Lipase/lipooxygenase, PLAT/LH2 family protein -0.75 0.3 -0.3
85 AT1G18710 myb domain protein 47 myb domain protein 47, myb domain
protein 47		 -0.75 0.33 -0.31
86 AT5G05230 RING/U-box superfamily protein -0.74 0.32 -0.3
87 AT2G32800 protein kinase family protein AP4.3A -0.74 0.33 -0.35
88 AT4G36040 Chaperone DnaJ-domain superfamily protein DnaJ11 -0.74 0.32 -0.29
89 AT4G27990 YGGT family protein ATYLMG1-2, YLMG1-2 -0.74 0.31 -0.3
90 AT5G27280 Zim17-type zinc finger protein -0.74 0.31 -0.31
91 AT4G16190 Papain family cysteine protease -0.74 0.31 -0.33
92 AT5G49710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.73 0.32 -0.31
93 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.73 0.35 -0.37
94 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.32 -0.3
95 AT1G05840 Eukaryotic aspartyl protease family protein -0.73 0.31 -0.31
96 AT2G20920 Protein of unknown function (DUF3353) -0.73 0.29 -0.29
97 AT1G55110 indeterminate(ID)-domain 7 indeterminate(ID)-domain 7,
indeterminate(ID)-domain 7		 -0.73 0.33 -0.32
98 AT2G32090 Lactoylglutathione lyase / glyoxalase I family protein -0.73 0.33 -0.3
99 AT5G06370 NC domain-containing protein-related -0.73 0.32 -0.32
100 AT3G55070 LisH/CRA/RING-U-box domains-containing protein -0.72 0.32 -0.31
101 AT3G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits
to 20 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.32 -0.35
102 AT5G01990 Auxin efflux carrier family protein -0.72 0.31 -0.3
103 AT1G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.32 -0.32
104 AT1G56090 Tetratricopeptide repeat (TPR)-like superfamily protein -0.72 0.31 -0.34
105 AT1G27200 Domain of unknown function (DUF23) -0.71 0.32 -0.32
106 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.71 0.3 -0.32
107 AT5G19420 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 -0.71 0.31 -0.34
108 AT2G46260 BTB/POZ/Kelch-associated protein -0.71 0.31 -0.32
109 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 -0.71 0.3 -0.3
110 AT3G08760 Protein kinase superfamily protein ATSIK -0.7 0.31 -0.3
111 AT1G67530 ARM repeat superfamily protein -0.7 0.31 -0.32
112 AT3G14067 Subtilase family protein -0.7 0.3 -0.34
113 AT3G10800 Basic-leucine zipper (bZIP) transcription factor family
protein		 BZIP28 -0.7 0.29 -0.32
114 AT4G34370 RING/U-box superfamily protein ARIADNE 1, ARABIDOPSIS ARIADNE 1 -0.7 0.31 -0.31
115 AT1G69260 ABI five binding protein ABI five binding protein -0.7 0.31 -0.33
116 AT4G33940 RING/U-box superfamily protein -0.7 0.3 -0.33
117 AT3G56880 VQ motif-containing protein -0.7 0.31 -0.3
118 AT1G59910 Actin-binding FH2 (formin homology 2) family protein -0.7 0.3 -0.33
119 AT2G28400 Protein of unknown function, DUF584 -0.7 0.28 -0.34
120 AT2G26430 arginine-rich cyclin 1 ARGININE-RICH CYCLIN 1,
arginine-rich cyclin 1		 -0.69 0.33 -0.31
121 AT4G16780 homeobox protein 2 homeobox protein 2, ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 2, HAT4,
homeobox protein 2		 -0.69 0.31 -0.32
122 AT4G37180 Homeodomain-like superfamily protein -0.69 0.31 -0.29
123 AT2G20740 Tetraspanin family protein -0.69 0.31 -0.33
124 AT5G58740 HSP20-like chaperones superfamily protein -0.69 0.33 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
125 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - -0.79 0.43 -0.44