AT3G04560 : -
Query Information
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AGICode AT3G04560
Description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 16 growth stages; Has 227 Blast hits to 225 proteins in 83 species: Archae - 0; Bacteria - 17; Metazoa - 98; Fungi - 29; Plants - 51; Viruses - 1; Other Eukaryotes - 31 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G04560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 16 growth stages; Has
227 Blast hits to 225 proteins in 83 species: Archae - 0;
Bacteria - 17; Metazoa - 98; Fungi - 29; Plants - 51;
Viruses - 1; Other Eukaryotes - 31 (source: NCBI BLink).		 1 0.33 -0.3
2 AT1G21270 wall-associated kinase 2 wall-associated kinase 2 -0.83 0.34 -0.32
3 AT3G14210 epithiospecifier modifier 1 epithiospecifier modifier 1 -0.78 0.3 -0.31
4 AT3G21950 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.78 0.31 -0.29
5 AT5G35490 mto 1 responding up 1 ARABIDOPSIS MTO 1 RESPONDING UP 1,
MTO 1 RESPONDING UP 1		 -0.78 0.3 -0.31
6 AT1G69730 Wall-associated kinase family protein -0.76 0.31 -0.31
7 AT2G35155 Trypsin family protein -0.76 0.29 -0.3
8 AT1G68140 Protein of unknown function (DUF1644) 0.76 0.31 -0.31
9 AT4G23130 cysteine-rich RLK (RECEPTOR-like protein kinase) 5 cysteine-rich RLK (RECEPTOR-like
protein kinase) 5, RECEPTOR-LIKE
PROTEIN KINASE 6		 -0.76 0.31 -0.3
10 AT4G23300 cysteine-rich RLK (RECEPTOR-like protein kinase) 22 cysteine-rich RLK (RECEPTOR-like
protein kinase) 22		 -0.76 0.31 -0.33
11 AT5G61420 myb domain protein 28 AtMYB28, HIGH ALIPHATIC
GLUCOSINOLATE 1, myb domain
protein 28, PRODUCTION OF
METHIONINE-DERIVED GLUCOSINOLATE 1		 -0.75 0.32 -0.33
12 AT1G07650 Leucine-rich repeat transmembrane protein kinase -0.75 0.29 -0.32
13 AT2G44670 Protein of unknown function (DUF581) -0.75 0.32 -0.31
14 AT2G47240 AMP-dependent synthetase and ligase family protein ECERIFERUM 8, LONG-CHAIN ACYL-COA
SYNTHASE 1		 -0.75 0.33 -0.32
15 AT5G55450 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.75 0.32 -0.31
16 AT4G13840 HXXXD-type acyl-transferase family protein -0.75 0.32 -0.32
17 AT5G35480 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.74 0.32 -0.31
18 AT1G26570 UDP-glucose dehydrogenase 1 UDP-GLUCOSE DEHYDROGENASE 1,
UDP-glucose dehydrogenase 1		 -0.74 0.3 -0.31
19 AT3G53250 SAUR-like auxin-responsive protein family -0.74 0.29 -0.32
20 AT2G24570 WRKY DNA-binding protein 17 ATWRKY17, WRKY DNA-binding protein
17		 0.74 0.33 -0.32
21 AT3G01660 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.74 0.33 -0.31
22 AT3G45210 Protein of unknown function, DUF584 -0.74 0.31 -0.3
23 AT3G06740 GATA transcription factor 15 GATA transcription factor 15 -0.74 0.32 -0.32
24 AT3G48610 non-specific phospholipase C6 non-specific phospholipase C6 -0.73 0.32 -0.33
25 AT5G22630 arogenate dehydratase 5 arogenate dehydratase 5 0.73 0.33 -0.32
26 AT3G19910 RING/U-box superfamily protein 0.73 0.31 -0.31
27 AT2G03240 EXS (ERD1/XPR1/SYG1) family protein 0.73 0.32 -0.3
28 AT1G50570 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.72 0.32 -0.31
29 AT2G19650 Cysteine/Histidine-rich C1 domain family protein -0.72 0.31 -0.29
30 AT5G23920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane, vacuole; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G52420.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.72 0.33 -0.31
31 AT5G44650 Encodes a chloroplast protein that induces tolerance to
multiple environmental stresses and reduces photooxidative
damage.		 Arabidopsis thaliana chloroplast
protein-enhancing stress
tolerance, chloroplast
protein-enhancing stress
tolerance, Ycf3-interacting
protein 1		 -0.72 0.31 -0.32
32 AT5G48110 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.72 0.32 -0.31
33 AT4G31290 ChaC-like family protein 0.72 0.33 -0.3
34 AT2G02020 Major facilitator superfamily protein AtPTR4, peptide transporter 4 -0.71 0.32 -0.3
35 AT1G19850 Transcriptional factor B3 family protein / auxin-responsive
factor AUX/IAA-related		 AUXIN RESPONSE FACTOR 5,
indole-3-acetic acid inducible 24,
MONOPTEROS		 0.71 0.31 -0.28
36 AT3G11090 LOB domain-containing protein 21 LOB domain-containing protein 21 -0.71 0.3 -0.32
37 AT2G26580 plant-specific transcription factor YABBY family protein YABBY5 -0.71 0.34 -0.3
38 AT5G02830 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.3 -0.31
39 AT4G17600 Chlorophyll A-B binding family protein LIL3:1 -0.7 0.33 -0.32
40 AT5G53760 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 11,
MILDEW RESISTANCE LOCUS O 11		 0.7 0.33 -0.3
41 AT5G40060 Disease resistance protein (NBS-LRR class) family -0.7 0.31 -0.33
42 AT2G41940 zinc finger protein 8 zinc finger protein 8 -0.7 0.31 -0.31
43 AT1G48460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.32 -0.32
44 AT5G27490 Integral membrane Yip1 family protein -0.7 0.31 -0.28
45 AT1G60000 RNA-binding (RRM/RBD/RNP motifs) family protein -0.69 0.3 -0.33
46 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 0.69 0.33 -0.3
47 AT4G24700 unknown protein; Has 20 Blast hits to 20 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.31 -0.3
48 AT3G04760 Pentatricopeptide repeat (PPR-like) superfamily protein -0.69 0.32 -0.3
49 AT4G09030 arabinogalactan protein 10 arabinogalactan protein 10,
ATAGP10		 0.69 0.31 -0.34
50 AT4G38520 Protein phosphatase 2C family protein -0.69 0.32 -0.34
51 AT3G19200 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits
to 51 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.32 -0.32
52 AT4G14400 ankyrin repeat family protein ACCELERATED CELL DEATH 6 -0.68 0.32 -0.31
53 AT1G02400 gibberellin 2-oxidase 6 Arabidopsis thaliana gibberellin
2-oxidase 4, ARABIDOPSIS THALIANA
GIBBERELLIN 2-OXIDASE 6,
DOWNSTREAM TARGET OF AGL15 1,
gibberellin 2-oxidase 6		 0.68 0.31 -0.32
54 AT1G23205 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.68 0.32 -0.3
55 AT3G07800 Thymidine kinase -0.68 0.3 -0.31
56 AT1G71890 Major facilitator superfamily protein SUCROSE-PROTON SYMPORTER 5, SUC5 -0.68 0.31 -0.33
57 AT1G11700 Protein of unknown function, DUF584 -0.68 0.33 -0.3
58 AT5G23060 calcium sensing receptor calcium sensing receptor -0.68 0.34 -0.32
59 AT2G22770 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 NAI1 0.68 0.32 -0.34
60 AT2G46900 CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix,
Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to
2464 proteins in 333 species: Archae - 2; Bacteria - 151;
Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47;
Other Eukaryotes - 1303 (source: NCBI BLink).		 0.67 0.34 -0.32
61 AT3G20340 Expression of the gene is downregulated in the presence of
paraquat, an inducer of photoxidative stress.		 0.67 0.31 -0.31
62 AT4G18375 RNA-binding KH domain-containing protein -0.67 0.32 -0.31
63 AT3G13380 BRI1-like 3 BRI1-like 3 0.67 0.29 -0.33
64 AT1G11480 eukaryotic translation initiation factor-related 0.67 0.32 -0.31
65 AT3G12690 AGC kinase 1.5 AGC kinase 1.5 -0.67 0.31 -0.33
66 AT1G27940 P-glycoprotein 13 ATP-binding cassette B13,
P-glycoprotein 13		 -0.67 0.31 -0.32
67 AT1G61890 MATE efflux family protein 0.67 0.31 -0.34
68 AT1G72790 hydroxyproline-rich glycoprotein family protein 0.67 0.34 -0.34
69 AT5G18460 Protein of Unknown Function (DUF239) -0.67 0.32 -0.33
70 AT2G41090 Calcium-binding EF-hand family protein -0.67 0.3 -0.31
71 AT2G30130 Lateral organ boundaries (LOB) domain family protein ASL5, LBD12, PEACOCK 1 0.67 0.3 -0.31
72 AT2G15820 endonucleases ORGANELLE TRANSCRIPT PROCESSING 51 -0.67 0.32 -0.33
73 AT5G67250 SKP1/ASK1-interacting protein 2 SKP1/ASK1-interacting protein 2,
VIER F-BOX PROTEINE 4		 0.67 0.31 -0.32
74 AT4G03150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.67 0.33 -0.32
75 AT4G21560 vacuolar protein sorting-associated protein 28 homolog 1 vacuolar protein sorting 28,
vacuolar protein
sorting-associated protein 28
homolog 1		 0.67 0.3 -0.33
76 AT2G23670 homolog of Synechocystis YCF37 homolog of Synechocystis YCF37 -0.67 0.3 -0.29
77 AT5G11270 overexpressor of cationic peroxidase 3 overexpressor of cationic
peroxidase 3		 -0.67 0.29 -0.32
78 AT1G68690 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 9, proline-rich
extensin-like receptor kinase 9		 0.66 0.31 -0.34
79 AT3G04670 WRKY DNA-binding protein 39 WRKY DNA-BINDING PROTEIN 39, WRKY
DNA-binding protein 39		 0.66 0.32 -0.31
80 AT5G43460 HR-like lesion-inducing protein-related 0.64 0.32 -0.32
81 AT5G10510 AINTEGUMENTA-like 6 AINTEGUMENTA-like 6, PLETHORA 3 0.64 0.31 -0.3
82 AT1G03590 Protein phosphatase 2C family protein 0.64 0.31 -0.33
83 AT2G26700 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 PINOID2 0.64 0.31 -0.29
84 AT2G45400 NAD(P)-binding Rossmann-fold superfamily protein BEN1 0.64 0.31 -0.3
85 AT5G23220 nicotinamidase 3 nicotinamidase 3 0.64 0.31 -0.34
86 AT2G18700 trehalose phosphatase/synthase 11 trehalose phosphatase/synthase 11,
ATTPSB, trehalose
phosphatase/synthase 11,
TREHALOSE-6-PHOSPHATE SYNTHASE 11		 0.64 0.3 -0.29
87 AT4G27260 Auxin-responsive GH3 family protein GH3.5, WES1 0.64 0.34 -0.33
88 AT5G66700 homeobox 53 ARABIDOPSIS THALIANA HOMEOBOX 53,
HOMEOBOX-8, homeobox 53		 0.63 0.31 -0.3
89 AT4G37250 Leucine-rich repeat protein kinase family protein 0.62 0.33 -0.3
90 AT3G48530 SNF1-related protein kinase regulatory subunit gamma 1 SNF1-related protein kinase
regulatory subunit gamma 1		 0.62 0.3 -0.33
91 AT5G11390 WPP domain-interacting protein 1 WPP domain-interacting protein 1 0.62 0.33 -0.32
92 AT3G21770 Peroxidase superfamily protein 0.62 0.3 -0.32
93 AT3G49810 ARM repeat superfamily protein 0.62 0.33 -0.31
94 AT3G12090 tetraspanin6 tetraspanin6 0.62 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0074 Cystine L-Cystine L-Cystine protein precursor 0.73 0.45 -0.43 C0074