AT3G04760 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G04760
Description Pentatricopeptide repeat (PPR-like) superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G04760 Pentatricopeptide repeat (PPR-like) superfamily protein 1 0.31 -0.33
2 AT1G01970 Tetratricopeptide repeat (TPR)-like superfamily protein 0.9 0.35 -0.33
3 AT3G56010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 25
Blast hits to 25 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.9 0.32 -0.3
4 AT1G70730 Phosphoglucomutase/phosphomannomutase family protein phosphoglucomutase 2 0.9 0.33 -0.3
5 AT2G06520 photosystem II subunit X photosystem II subunit X 0.88 0.31 -0.35
6 AT3G51820 UbiA prenyltransferase family protein ATG4, CHLG, G4, PIGMENT DEFECTIVE
325		 0.87 0.31 -0.31
7 AT4G20360 RAB GTPase homolog E1B ATRAB8D, RAB GTPase homolog E1B,
RAB GTPase homolog E1B		 0.87 0.34 -0.3
8 AT2G47450 chloroplast signal recognition particle component (CAO) CHAOS, CHLOROPLAST SIGNAL
RECOGNITION PARTICLE 43		 0.86 0.32 -0.31
9 AT5G66470 RNA binding;GTP binding 0.86 0.31 -0.31
10 AT3G52380 chloroplast RNA-binding protein 33 chloroplast RNA-binding protein
33, PIGMENT DEFECTIVE 322		 0.86 0.32 -0.32
11 AT1G45230 Protein of unknown function (DUF3223) 0.85 0.31 -0.32
12 AT3G47860 chloroplastic lipocalin chloroplastic lipocalin 0.85 0.31 -0.32
13 AT3G53250 SAUR-like auxin-responsive protein family 0.85 0.3 -0.31
14 AT1G35420 alpha/beta-Hydrolases superfamily protein 0.85 0.32 -0.32
15 AT2G21860 violaxanthin de-epoxidase-related 0.85 0.31 -0.32
16 AT1G60000 RNA-binding (RRM/RBD/RNP motifs) family protein 0.84 0.3 -0.3
17 AT3G01660 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.84 0.32 -0.33
18 AT1G27940 P-glycoprotein 13 ATP-binding cassette B13,
P-glycoprotein 13		 0.83 0.31 -0.33
19 AT1G54500 Rubredoxin-like superfamily protein 0.83 0.33 -0.31
20 AT5G48730 Pentatricopeptide repeat (PPR) superfamily protein 0.83 0.3 -0.31
21 AT3G19220 protein disulfide isomerases SHI-YO-U MEANS COTYLEDON IN
JAPANESE, SNOWY COTYLEDON 2		 0.83 0.3 -0.31
22 AT2G26500 cytochrome b6f complex subunit (petM), putative 0.83 0.32 -0.31
23 AT2G04270 RNAse E/G-like RNAse E/G-like 0.82 0.31 -0.32
24 AT1G66430 pfkB-like carbohydrate kinase family protein 0.82 0.31 -0.32
25 AT3G52840 beta-galactosidase 2 beta-galactosidase 2 0.81 0.34 -0.31
26 AT1G34380 5'-3' exonuclease family protein 0.8 0.31 -0.32
27 AT2G20020 RNA-binding CRS1 / YhbY (CRM) domain-containing protein ATCAF1, CAF1 0.8 0.32 -0.32
28 AT4G00370 Major facilitator superfamily protein ANTR2, anion transporter 2 0.8 0.3 -0.3
29 AT4G27620 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27610.3); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.8 0.29 -0.3
30 AT5G54770 thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1)
(THI4)		 THI1, THIAMINE4, THIAZOLE
REQUIRING		 0.8 0.31 -0.31
31 AT1G19800 trigalactosyldiacylglycerol 1 ATP-binding cassette I14,
trigalactosyldiacylglycerol 1		 0.8 0.31 -0.33
32 AT1G17620 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.79 0.29 -0.3
33 AT5G47050 SBP (S-ribonuclease binding protein) family protein -0.78 0.32 -0.32
34 AT2G44500 O-fucosyltransferase family protein -0.77 0.3 -0.32
35 AT4G25390 Protein kinase superfamily protein -0.77 0.32 -0.32
36 AT1G05620 uridine-ribohydrolase 2 nucleoside hydrolase 2,
uridine-ribohydrolase 2		 -0.76 0.31 -0.32
37 AT5G35080 INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Mannose-6-phosphate receptor, binding
(InterPro:IPR009011), Glucosidase II beta subunit-like
(InterPro:IPR012913); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.75 0.32 -0.3
38 AT2G01180 phosphatidic acid phosphatase 1 ATLPP1, phosphatidic acid
phosphatase 1, LIPID PHOSPHATE
PHOSPHATASE 1, phosphatidic acid
phosphatase 1		 -0.75 0.33 -0.3
39 AT3G44190 FAD/NAD(P)-binding oxidoreductase family protein -0.74 0.31 -0.28
40 AT5G10830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.74 0.31 -0.32
41 AT2G31090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G20562.1); Has 70 Blast hits to 70 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.73 0.3 -0.31
42 AT4G29270 HAD superfamily, subfamily IIIB acid phosphatase -0.72 0.3 -0.29
43 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.72 0.32 -0.31
44 AT3G24550 proline extensin-like receptor kinase 1 proline-rich extensin-like
receptor kinase 1, proline-rich
extensin-like receptor kinase 1		 -0.72 0.32 -0.3
45 AT4G14350 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 -0.71 0.33 -0.31
46 AT1G29690 MAC/Perforin domain-containing protein constitutively activated cell
death 1		 -0.7 0.3 -0.33
47 AT4G17615 calcineurin B-like protein 1 ARABIDOPSIS THALIANA CALCINEURIN
B-LIKE PROTEIN, calcineurin B-like
protein 1, SOS3-LIKE CALCIUM
BINDING PROTEIN 5		 -0.7 0.35 -0.33
48 AT1G28480 Thioredoxin superfamily protein GRX480, roxy19 -0.7 0.32 -0.29
49 AT2G45400 NAD(P)-binding Rossmann-fold superfamily protein BEN1 -0.7 0.32 -0.29
50 AT1G02400 gibberellin 2-oxidase 6 Arabidopsis thaliana gibberellin
2-oxidase 4, ARABIDOPSIS THALIANA
GIBBERELLIN 2-OXIDASE 6,
DOWNSTREAM TARGET OF AGL15 1,
gibberellin 2-oxidase 6		 -0.69 0.33 -0.33
51 AT4G37290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: cotyledon, hypocotyl, leaf; EXPRESSED
DURING: LP.04 four leaves visible; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G23270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.69 0.3 -0.35
52 AT2G03240 EXS (ERD1/XPR1/SYG1) family protein -0.69 0.32 -0.33
53 AT3G04560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 16 growth stages; Has
227 Blast hits to 225 proteins in 83 species: Archae - 0;
Bacteria - 17; Metazoa - 98; Fungi - 29; Plants - 51;
Viruses - 1; Other Eukaryotes - 31 (source: NCBI BLink).		 -0.69 0.3 -0.34
54 AT1G76350 Plant regulator RWP-RK family protein -0.68 0.31 -0.31
55 AT1G52950 Nucleic acid-binding, OB-fold-like protein -0.67 0.31 -0.31
56 AT2G22770 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 NAI1 -0.67 0.31 -0.32