AT3G06350 : EMBRYO DEFECTIVE 3004

Cytoscape Web will replace the contents of this div with your graph.

Change layout

ForceDirected
Circle
Radial
Tree
Reset

Change color

Background(random)
Nodes(random)
Nodes2(random)

AGICode	AT3G06350
Description	dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative

Gene information

Help

	Gene Code	Description / Information	Gene name	Correlation				link
	Gene Code	Description / Information	Gene name	pcc	2.5%	97.5%	PPI	link
1	AT3G06350	dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative	EMBRYO DEFECTIVE 3004, MATERNAL EFFECT EMBRYO ARREST 32	1	0.28	-0.3
2	AT3G43520	Transmembrane proteins 14C		0.77	0.33	-0.32
3	AT3G58730	vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)		0.76	0.32	-0.29
4	AT5G48310	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		-0.76	0.31	-0.33
5	AT5G66120	3-dehydroquinate synthase, putative		0.76	0.34	-0.31
6	AT2G26180	IQ-domain 6	IQ-domain 6	-0.76	0.32	-0.33
7	AT3G61160	Protein kinase superfamily protein		-0.75	0.35	-0.31
8	AT1G18250	Pathogenesis-related thaumatin superfamily protein	ATLP-1	-0.74	0.32	-0.32
9	AT4G11010	nucleoside diphosphate kinase 3	nucleoside diphosphate kinase 3	0.74	0.32	-0.33
10	AT4G36400	FAD-linked oxidases family protein	D-2-hydroxyglutarate dehydrogenase	0.71	0.32	-0.32
11	AT1G70550	Protein of Unknown Function (DUF239)		-0.7	0.31	-0.32
12	AT1G70710	glycosyl hydrolase 9B1	glycosyl hydrolase 9B1, CELLULASE 1, glycosyl hydrolase 9B1	-0.69	0.32	-0.32
13	AT2G02180	tobamovirus multiplication protein 3	tobamovirus multiplication protein 3	0.69	0.29	-0.32
14	AT4G27650	Eukaryotic release factor 1 (eRF1) family protein	PELOTA	0.69	0.31	-0.32
15	AT2G44525	Protein of unknown function (DUF498/DUF598)		0.68	0.32	-0.33
16	AT1G78900	vacuolar ATP synthase subunit A	vacuolar ATP synthase subunit A	0.68	0.31	-0.31
17	AT1G73620	Pathogenesis-related thaumatin superfamily protein		-0.68	0.32	-0.31
18	AT3G53320	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37070.1); Has 11044 Blast hits to 5993 proteins in 551 species: Archae - 8; Bacteria - 1486; Metazoa - 4078; Fungi - 1814; Plants - 348; Viruses - 112; Other Eukaryotes - 3198 (source: NCBI BLink).		-0.68	0.35	-0.3
19	AT1G16240	syntaxin of plants 51	ATSYP51, syntaxin of plants 51	0.68	0.33	-0.31
20	AT3G07540	Actin-binding FH2 (formin homology 2) family protein		-0.68	0.32	-0.34
21	AT1G21090	Cupredoxin superfamily protein		-0.67	0.32	-0.33
22	AT5G13290	Protein kinase superfamily protein	CORYNE, SUPPRESSOR OF LLP1 2	-0.67	0.32	-0.29
23	AT3G28480	Oxoglutarate/iron-dependent oxygenase		0.67	0.32	-0.31
24	AT2G02050	NADH-ubiquinone oxidoreductase B18 subunit, putative		0.66	0.3	-0.32
25	AT4G21105	cytochrome-c oxidases;electron carriers		0.66	0.31	-0.31
26	AT4G14200	Pentatricopeptide repeat (PPR) superfamily protein		-0.66	0.35	-0.3
27	AT4G00820	IQ-domain 17	IQ-domain 17	-0.66	0.32	-0.3
28	AT3G60840	microtubule-associated protein 65-4	microtubule-associated protein 65-4	-0.66	0.33	-0.31
29	AT2G03090	expansin A15	ATEXP15, expansin A15, ATHEXP ALPHA 1.3, EXPANSIN 15, expansin A15	-0.65	0.31	-0.3
30	AT2G40280	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein		0.65	0.31	-0.3
31	AT1G70895	CLAVATA3/ESR-RELATED 17	CLAVATA3/ESR-RELATED 17	-0.65	0.31	-0.32
32	AT2G39550	Prenyltransferase family protein	GERANYLGERANYLTRANSFERASE-I BETA SUBUNIT, GGB, PGGT-I	0.64	0.31	-0.31
33	AT1G80280	alpha/beta-Hydrolases superfamily protein		-0.64	0.31	-0.32
34	AT4G02290	glycosyl hydrolase 9B13	glycosyl hydrolase 9B13, glycosyl hydrolase 9B13	-0.64	0.33	-0.33
35	AT2G44830	Protein kinase superfamily protein		-0.63	0.31	-0.33
36	AT2G21050	like AUXIN RESISTANT 2	like AUXIN RESISTANT 2	-0.63	0.31	-0.33
37	AT2G31490	unknown protein; Has 55 Blast hits to 55 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		0.63	0.32	-0.32
38	AT3G13200	Cwf15 / Cwc15 cell cycle control family protein	EMBRYO DEFECTIVE 2769	0.62	0.32	-0.33
39	AT2G04850	Auxin-responsive family protein		-0.62	0.34	-0.31
40	AT3G27090	DCD (Development and Cell Death) domain protein		0.62	0.32	-0.33
41	AT5G04260	WCRKC thioredoxin 2	WCRKC thioredoxin 2	0.62	0.32	-0.3
42	AT5G51200	Protein of unknown function (DUF3414)	EMBRYO DEFECTIVE 3142	-0.62	0.31	-0.29
43	AT5G01890	Leucine-rich receptor-like protein kinase family protein		-0.61	0.3	-0.32
44	AT1G52600	Peptidase S24/S26A/S26B/S26C family protein		0.61	0.32	-0.32
45	AT5G57710	Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein		0.61	0.31	-0.33
46	AT5G22380	NAC domain containing protein 90	NAC domain containing protein 90, NAC domain containing protein 90	-0.61	0.32	-0.32
47	AT3G45120	transposable element gene		0.61	0.31	-0.34
48	AT3G25710	basic helix-loop-helix 32	ATAIG1, basic helix-loop-helix 32, TARGET OF MONOPTEROS 5	-0.61	0.28	-0.32
49	AT4G26500	chloroplast sulfur E	ARABIDOPSIS THALIANA SULFUR E, chloroplast sulfur E, MBRYO DEFECTIVE 1374, SULFUR E 1	0.61	0.31	-0.32
50	AT3G20150	Kinesin motor family protein		-0.6	0.32	-0.29
51	AT1G22520	Domain of unknown function (DUF543)		0.6	0.33	-0.33
52	AT4G03010	RNI-like superfamily protein		-0.6	0.29	-0.36
53	AT1G09410	pentatricopeptide (PPR) repeat-containing protein		0.6	0.31	-0.33
54	AT1G26090	P-loop containing nucleoside triphosphate hydrolases superfamily protein		0.6	0.32	-0.31
55	AT5G06780	Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein	AtEML2, EMSY-like 2	0.6	0.32	-0.34
56	AT1G14460	AAA-type ATPase family protein		-0.59	0.3	-0.31
57	AT2G35110	transcription activators	GNARLED, NCK-ASSOCIATED PROTEIN 1, NAPP	-0.59	0.31	-0.3
58	AT3G61690	nucleotidyltransferases		-0.58	0.31	-0.32
59	AT4G23496	SPIRAL1-like5	SPIRAL1-like5	-0.58	0.29	-0.33
60	AT3G26750	CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme E2C-binding protein (InterPro:IPR019193); Has 26 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		-0.58	0.3	-0.3
61	AT3G11520	CYCLIN B1;3	CYCLIN 2, CYCLIN B1;3	-0.58	0.32	-0.32
62	AT1G52150	Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein	ATHB-15, ATHB15, CORONA, INCURVATA 4	-0.57	0.31	-0.31
63	AT3G16870	GATA transcription factor 17	GATA transcription factor 17	-0.57	0.34	-0.31

Metabolite information

Help

	CID	Metabolite name			Pathway Information	Correlation				link
	CID	Compound name	Stereochemistry	Aracyc name	Pathway Information	pcc	2.5%	97.5%	PPI	link
64	C0165	MST_1688.6	-	-	-	0.83	0.46	-0.45
65	C0164	MST_1596.8	-	-	-	0.77	0.46	-0.47
66	C0163	MST_1589.2	-	-	-	0.74	0.42	-0.44
67	C0160	MST_1509.5	-	-	-	0.73	0.48	-0.44
68	C0161	MST_1566.3	-	-	-	0.71	0.45	-0.45
69	C0185	MST_3139.9	-	-	-	0.62	0.46	-0.44

Top