AT3G10640 : VPS60.1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G10640
Description SNF7 family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G10640 SNF7 family protein VPS60.1 1 0.32 -0.29
2 AT4G18950 Integrin-linked protein kinase family 0.89 0.32 -0.33
3 AT1G64610 Transducin/WD40 repeat-like superfamily protein 0.88 0.32 -0.3
4 AT4G15800 ralf-like 33 ralf-like 33 0.87 0.32 -0.32
5 AT5G52210 GTP-binding protein 1 ATARLB1, GTP-binding protein 1,
GTP-binding protein 1		 0.85 0.32 -0.31
6 AT5G18490 Plant protein of unknown function (DUF946) 0.85 0.31 -0.31
7 AT1G49300 RAB GTPase homolog G3E ARABIDOPSIS RAB GTPASE HOMOLOG 7,
ARABIDOPSIS RAB GTPASE HOMOLOG
G3E, RAB GTPase homolog G3E		 0.85 0.29 -0.35
8 AT3G26670 Protein of unknown function (DUF803) 0.85 0.31 -0.32
9 AT1G14360 UDP-galactose transporter 3 ATUTR3, UDP-galactose transporter
3		 0.84 0.32 -0.29
10 AT1G22400 UDP-Glycosyltransferase superfamily protein ARABIDOPSIS THALIANA UDP-GLUCOSYL
TRANSFERASE 85A1, UGT85A1		 0.84 0.3 -0.31
11 AT5G13190 CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis
factor alpha factor (InterPro:IPR006629); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 AtGILP, GSH-induced LITAF domain
protein		 0.84 0.31 -0.32
12 AT4G25960 P-glycoprotein 2 ATP-binding cassette B2,
P-glycoprotein 2		 -0.84 0.3 -0.33
13 AT2G31200 actin depolymerizing factor 6 actin depolymerizing factor 6,
ATADF6		 0.84 0.3 -0.3
14 AT3G06420 Ubiquitin-like superfamily protein autophagy 8h 0.83 0.32 -0.31
15 AT3G59280 Protein Transporter, Pam16 THAXTOMIN A RESISTANT 1 0.83 0.33 -0.31
16 AT4G24160 alpha/beta-Hydrolases superfamily protein 0.83 0.31 -0.31
17 AT1G18680 HNH endonuclease domain-containing protein 0.82 0.32 -0.29
18 AT1G28440 HAESA-like 1 HAESA-like 1 -0.82 0.31 -0.32
19 AT3G47810 Calcineurin-like metallo-phosphoesterase superfamily
protein		 ATVPS29, MAIGO 1, VACUOLAR PROTEIN
SORTING 29		 0.82 0.31 -0.32
20 AT5G67490 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1674 (InterPro:IPR012875); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.82 0.31 -0.33
21 AT1G11310 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 2,
MILDEW RESISTANCE LOCUS O 2,
POWDERY MILDEW RESISTANT 2		 0.82 0.33 -0.32
22 AT1G71100 Ribose 5-phosphate isomerase, type A protein RADIAL SWELLING 10 0.82 0.31 -0.33
23 AT1G74330 Protein kinase superfamily protein 0.82 0.32 -0.32
24 AT5G46780 VQ motif-containing protein 0.82 0.35 -0.31
25 AT5G56750 N-MYC downregulated-like 1 N-MYC downregulated-like 1 0.81 0.31 -0.35
26 AT3G53970 proteasome inhibitor-related 0.81 0.31 -0.32
27 AT2G25110 stromal cell-derived factor 2-like protein precursor Arabidopsis thaliana STROMAL
CELL-DERIVED FACTOR 2-like protein
precursor, ATSDF2-LIKE, stromal
cell-derived factor 2-like protein
precursor		 0.81 0.33 -0.31
28 AT5G64130 cAMP-regulated phosphoprotein 19-related protein 0.81 0.31 -0.32
29 AT3G06100 NOD26-like intrinsic protein 7;1 NOD26-like intrinsic protein 7;1,
NOD26-LIKE MIP 6, NOD26-LIKE MIP 8		 0.81 0.31 -0.3
30 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 0.81 0.32 -0.33
31 AT5G57510 unknown protein; Has 27 Blast hits to 27 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.8 0.32 -0.31
32 AT5G11680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, plasma
membrane; EXPRESSED IN: 26 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
WW-domain-binding protein (InterPro:IPR018826); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.8 0.33 -0.33
33 AT1G17080 Ribosomal protein L18ae family 0.8 0.3 -0.32
34 AT5G55930 oligopeptide transporter 1 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 1, oligopeptide
transporter 1		 0.8 0.31 -0.34
35 AT1G17620 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.8 0.33 -0.3
36 AT3G61790 Protein with RING/U-box and TRAF-like domains 0.8 0.32 -0.31
37 AT1G04980 PDI-like 2-2 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 10, PDI-like
2-2, PROTEIN DISULFIDE ISOMERASE,
PDI-like 2-2		 0.79 0.29 -0.31
38 AT1G29850 double-stranded DNA-binding family protein 0.79 0.33 -0.32
39 AT2G02810 UDP-galactose transporter 1 UDP-GALACTOSE TRANSPORTER 1,
UDP-galactose transporter 1		 0.79 0.29 -0.3
40 AT1G74950 TIFY domain/Divergent CCT motif family protein JASMONATE-ZIM-DOMAIN PROTEIN 2,
TIFY10B		 0.79 0.32 -0.31
41 AT2G25310 Protein of unknown function (DUF2012) 0.79 0.32 -0.32
42 AT1G04960 Protein of unknown function (DUF1664) 0.79 0.31 -0.31
43 AT2G20900 diacylglycerol kinase 5 ATDGK5, diacylglycerol kinase 5 0.79 0.3 -0.32
44 AT1G29340 plant U-box 17 ARABIDOPSIS THALIANA PLANT U-BOX
17, plant U-box 17		 0.79 0.33 -0.31
45 AT5G35080 INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Mannose-6-phosphate receptor, binding
(InterPro:IPR009011), Glucosidase II beta subunit-like
(InterPro:IPR012913); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.78 0.33 -0.3
46 AT1G10700 phosphoribosyl pyrophosphate (PRPP) synthase 3 phosphoribosyl pyrophosphate
(PRPP) synthase 3		 0.78 0.29 -0.33
47 AT5G16830 syntaxin of plants 21 ATPEP12, ATSYP21, PEP12, PEP12P,
syntaxin of plants 21		 0.78 0.33 -0.3
48 AT1G63180 UDP-D-glucose/UDP-D-galactose 4-epimerase 3 UDP-D-glucose/UDP-D-galactose
4-epimerase 3		 0.78 0.32 -0.3
49 AT5G54170 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.78 0.34 -0.32
50 AT3G57480 zinc finger (C2H2 type, AN1-like) family protein 0.78 0.32 -0.32
51 AT1G70700 TIFY domain/Divergent CCT motif family protein JASMONATE-ZIM-DOMAIN PROTEIN 9,
TIFY7		 0.78 0.32 -0.28
52 AT1G24350 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 0.78 0.32 -0.31
53 AT1G79210 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 0.78 0.31 -0.32
54 AT2G47960 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF974 (InterPro:IPR010378); Has 285 Blast
hits to 284 proteins in 126 species: Archae - 0; Bacteria -
0; Metazoa - 150; Fungi - 68; Plants - 32; Viruses - 0;
Other Eukaryotes - 35 (source: NCBI BLink).		 0.78 0.3 -0.33
55 AT4G36470 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.78 0.3 -0.33
56 AT1G02410 cytochrome c oxidase assembly protein CtaG / Cox11 family 0.78 0.33 -0.32
57 AT1G78895 Reticulon family protein 0.78 0.3 -0.3
58 AT4G37430 cytochrome P450, family 91, subfamily A, polypeptide 2 CYTOCHROME P450 MONOOXYGENASE
81F1, cytochrome P450, family 91,
subfamily A, polypeptide 2		 0.78 0.33 -0.32
59 AT5G56170 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 LORELEI-LIKE-GPI-ANCHORED PROTEIN
1		 0.77 0.33 -0.31
60 AT5G11860 SCP1-like small phosphatase 5 SCP1-like small phosphatase 5 0.77 0.31 -0.3
61 AT3G44190 FAD/NAD(P)-binding oxidoreductase family protein 0.77 0.32 -0.31
62 AT3G61150 homeodomain GLABROUS 1 HOMEODOMAIN-GLABRA2 1, homeodomain
GLABROUS 1		 -0.77 0.33 -0.31
63 AT1G12810 proline-rich family protein 0.77 0.32 -0.32
64 AT5G62575 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G47833.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 succinate dehydrogenase 7,
succinate dehydrogenase 7B		 0.77 0.31 -0.32
65 AT3G28730 high mobility group high mobility group, high mobility
group, NUCLEOSOME/CHROMATIN
ASSEMBLY FACTOR D, SSRP1		 -0.77 0.31 -0.32
66 AT1G78060 Glycosyl hydrolase family protein -0.77 0.32 -0.3
67 AT2G27450 nitrilase-like protein 1 ATNLP1, CPA, nitrilase-like
protein 1		 0.76 0.31 -0.31
68 AT3G10260 Reticulon family protein 0.76 0.3 -0.31
69 AT5G12390 Tetratricopeptide repeat (TPR)-like superfamily protein FISSION 1B 0.76 0.32 -0.31
70 AT2G31305 inhibitor-3 INHIBITOR-3 0.76 0.32 -0.34
71 AT4G28300 Protein of unknown function (DUF1421) 0.76 0.31 -0.32
72 AT4G30500 Protein of unknown function (DUF788) 0.76 0.35 -0.29
73 AT3G51990 Protein kinase superfamily protein 0.76 0.32 -0.33
74 AT2G18770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.76 0.33 -0.3
75 AT5G53330 Ubiquitin-associated/translation elongation factor EF1B
protein		 0.76 0.32 -0.3
76 AT2G17380 associated protein 19 associated protein 19 0.76 0.33 -0.34
77 AT5G03030 Chaperone DnaJ-domain superfamily protein 0.76 0.31 -0.32
78 AT2G18040 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 peptidylprolyl cis/trans
isomerase, NIMA-interacting 1		 0.76 0.32 -0.3
79 AT2G25735 unknown protein; Has 31 Blast hits to 31 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.76 0.31 -0.33
80 AT1G26540 Agenet domain-containing protein -0.76 0.3 -0.32
81 AT4G27510 unknown protein; Has 25 Blast hits to 23 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.75 0.31 -0.29
82 AT1G80530 Major facilitator superfamily protein -0.74 0.3 -0.32
83 AT5G13000 glucan synthase-like 12 glucan synthase-like 12, callose
synthase 3, gsl12, glucan
synthase-like 12		 -0.74 0.32 -0.34
84 AT4G39330 cinnamyl alcohol dehydrogenase 9 ATCAD9, cinnamyl alcohol
dehydrogenase 9		 -0.74 0.33 -0.31
85 AT5G10800 RNA recognition motif (RRM)-containing protein -0.74 0.31 -0.32
86 AT1G48750 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.74 0.31 -0.31
87 AT3G16560 Protein phosphatase 2C family protein -0.74 0.32 -0.33
88 AT4G22730 Leucine-rich repeat protein kinase family protein -0.73 0.31 -0.32
89 AT1G24470 beta-ketoacyl reductase 2 ATKCR2, beta-ketoacyl reductase 2 -0.73 0.31 -0.31
90 AT4G16340 guanyl-nucleotide exchange factors;GTPase binding;GTP
binding		 SPIKE1 -0.72 0.31 -0.32
91 AT5G27940 WPP domain protein 3 WPP domain protein 3 -0.72 0.34 -0.29
92 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein -0.72 0.3 -0.31
93 AT5G37010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G65710.1); Has 6746 Blast hits to 5259
proteins in 486 species: Archae - 7; Bacteria - 485;
Metazoa - 3508; Fungi - 577; Plants - 378; Viruses - 50;
Other Eukaryotes - 1741 (source: NCBI BLink).		 -0.72 0.33 -0.33
94 AT1G53450 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14830.2); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.31 -0.31
95 AT3G60400 Mitochondrial transcription termination factor family
protein		 -0.71 0.31 -0.31
96 AT1G08840 DNA replication helicase, putative embryo defective 2411 -0.7 0.3 -0.33
97 AT5G13400 Major facilitator superfamily protein -0.7 0.32 -0.31
98 AT3G25560 NSP-interacting kinase 2 NSP-interacting kinase 2 -0.7 0.29 -0.31
99 AT1G54200 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits
to 581 proteins in 136 species: Archae - 0; Bacteria - 72;
Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other
Eukaryotes - 620 (source: NCBI BLink).		 -0.7 0.3 -0.33
100 AT5G48480 Lactoylglutathione lyase / glyoxalase I family protein -0.7 0.32 -0.31
101 AT2G20000 CDC27 family protein CDC27b, HOBBIT -0.7 0.31 -0.32
102 AT5G03070 importin alpha isoform 9 importin alpha isoform 9 -0.7 0.32 -0.32
103 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 -0.69 0.3 -0.28
104 AT1G76800 Vacuolar iron transporter (VIT) family protein -0.69 0.28 -0.34
105 AT1G61010 cleavage and polyadenylation specificity factor 73-I cleavage and polyadenylation
specificity factor 73-I		 -0.69 0.32 -0.32
106 AT3G43610 Spc97 / Spc98 family of spindle pole body (SBP) component -0.69 0.32 -0.32
107 AT3G05750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G26910.1); Has 2317
Blast hits to 1467 proteins in 247 species: Archae - 4;
Bacteria - 750; Metazoa - 557; Fungi - 182; Plants - 180;
Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).		 -0.69 0.31 -0.3
108 AT5G44800 chromatin remodeling 4 chromatin remodeling 4, PICKLE
RELATED 1		 -0.69 0.35 -0.32
109 AT5G55340 MBOAT (membrane bound O-acyl transferase) family protein -0.69 0.31 -0.33
110 AT2G36730 Pentatricopeptide repeat (PPR) superfamily protein -0.68 0.29 -0.31
111 AT1G64860 sigma factor A RPOD1, RNA POLYMERASE SIGMA
SUBUNIT 1, RNApolymerase sigma
subunit 2, sigma factor A, SIGB		 -0.68 0.31 -0.3
112 AT1G63850 BTB/POZ domain-containing protein -0.67 0.31 -0.31
113 AT3G01880 Plant protein of unknown function (DUF946) -0.67 0.32 -0.33
114 AT3G15380 Plasma-membrane choline transporter family protein -0.67 0.32 -0.32
115 AT1G52310 protein kinase family protein / C-type lectin
domain-containing protein		 -0.67 0.31 -0.33
116 AT1G63480 AT hook motif DNA-binding family protein -0.67 0.31 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
117 C0128 Jasmonic acid (+/-)-Jasmonic acid (+)-Jasmonate; (-)-Jasmonate jasmonic acid biosynthesis 0.83 0.44 -0.43 C0128