AT3G08960 : -
Query Information
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AGICode AT3G08960
Description ARM repeat superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G08960 ARM repeat superfamily protein 1 0.33 -0.3
2 AT5G17140 Cysteine proteinases superfamily protein 0.73 0.29 -0.32
3 AT1G10950 transmembrane nine 1 AtTMN1, transmembrane nine 1 0.7 0.32 -0.33
4 AT3G59490 unknown protein; Has 30 Blast hits to 30 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.69 0.32 -0.3
5 AT2G38960 endoplasmic reticulum oxidoreductins 2 endoplasmic reticulum
oxidoreductins 2, endoplasmic
reticulum oxidoreductins 2		 0.69 0.34 -0.31
6 AT2G31740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.69 0.33 -0.32
7 AT4G24490 RAB geranylgeranyl transferase alpha subunit 1 RAB geranylgeranyl transferase
alpha subunit 1, RAB
geranylgeranyl transferase alpha
subunit 1		 0.69 0.31 -0.3
8 AT1G48095 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits
to 82 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.33 -0.32
9 AT1G51880 root hair specific 6 root hair specific 6 -0.67 0.33 -0.31
10 AT5G06020 Plant self-incompatibility protein S1 family -0.67 0.34 -0.33
11 AT5G27220 Frigida-like protein 0.66 0.3 -0.31
12 AT4G07540 transposable element gene -0.66 0.32 -0.33
13 AT2G20770 GCR2-like 2 GCR2-like 2 -0.66 0.3 -0.29
14 AT1G05750 Tetratricopeptide repeat (TPR)-like superfamily protein CLB19, pigment defective 247 0.65 0.33 -0.3
15 AT3G01630 Major facilitator superfamily protein 0.65 0.31 -0.3
16 AT1G17040 SH2 domain protein A ARABIDOPSIS THALIANA SH2 DOMAIN
PROTEIN A, SH2 domain protein A,
STAT-TYPE LINKER-SH2 DOMAIN FACTOR
A		 -0.65 0.31 -0.31
17 AT1G79100 arginine/serine-rich protein-related 0.65 0.3 -0.33
18 AT2G19000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 71 Blast hits to
71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.32 -0.34
19 AT2G37160 Transducin/WD40 repeat-like superfamily protein 0.64 0.3 -0.35
20 AT1G69210 Uncharacterised protein family UPF0090 0.64 0.31 -0.32
21 AT5G39350 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.32 -0.32
22 AT1G28470 NAC domain containing protein 10 NAC domain containing protein 10,
NAC domain containing protein 10,
SECONDARY WALL-ASSOCIATED NAC
DOMAIN PROTEIN 3		 -0.63 0.29 -0.31
23 AT1G35900 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.32 -0.32
24 AT5G10210 CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane
targeting (InterPro:IPR000008); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G65030.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.63 0.33 -0.31
25 AT5G26630 MADS-box transcription factor family protein -0.63 0.32 -0.3
26 AT5G60870 Regulator of chromosome condensation (RCC1) family protein RCC1/UVR8/GEF-like 3 0.63 0.33 -0.32
27 AT3G30160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G35320.1); Has 9 Blast hits to 9 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.3 -0.33
28 AT5G50390 Pentatricopeptide repeat (PPR-like) superfamily protein EMBRYO DEFECTIVE 3141 0.63 0.32 -0.32
29 AT5G49260 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.63 0.32 -0.33
30 AT3G42860 zinc knuckle (CCHC-type) family protein -0.63 0.31 -0.33
31 AT3G27325 hydrolases, acting on ester bonds 0.63 0.31 -0.3
32 AT2G33410 RNA-binding (RRM/RBD/RNP motifs) family protein 0.63 0.3 -0.31
33 AT1G16490 myb domain protein 58 MYB DOMAIN PROTEIN 58, myb domain
protein 58		 -0.62 0.31 -0.33
34 AT1G20750 RAD3-like DNA-binding helicase protein -0.62 0.32 -0.34
35 AT5G35820 transposable element gene -0.62 0.3 -0.32
36 AT1G60470 galactinol synthase 4 galactinol synthase 4, galactinol
synthase 4		 -0.62 0.32 -0.31
37 AT1G55880 Pyridoxal-5'-phosphate-dependent enzyme family protein 0.62 0.32 -0.3
38 AT2G44230 Plant protein of unknown function (DUF946) -0.61 0.32 -0.32
39 AT5G53480 ARM repeat superfamily protein 0.61 0.32 -0.3
40 AT2G17610 transposable element gene 0.61 0.32 -0.33
41 AT5G05480 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
protein		 0.61 0.31 -0.33
42 AT1G44830 Integrase-type DNA-binding superfamily protein 0.6 0.31 -0.32
43 AT5G48450 SKU5 similar 3 SKU5 similar 3 0.6 0.32 -0.31
44 AT5G14640 shaggy-like kinase 13 SHAGGY-LIKE KINASE 13, shaggy-like
kinase 13		 -0.59 0.33 -0.31
45 AT5G10290 leucine-rich repeat transmembrane protein kinase family
protein		 0.59 0.3 -0.32
46 AT3G52030 F-box family protein with WD40/YVTN repeat doamin -0.59 0.29 -0.31
47 AT5G40440 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase
kinase 3, mitogen-activated
protein kinase kinase 3		 -0.59 0.31 -0.32
48 AT4G29910 origin recognition complex protein 5 ATORC5, EMBRYO DEFECTIVE 2798,
origin recognition complex protein
5		 0.59 0.32 -0.33
49 AT3G04605 transposable element gene 0.59 0.31 -0.33
50 AT3G45490 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT2G25370.1); Has 99 Blast hits
to 96 proteins in 10 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.32 -0.32
51 AT4G26470 Calcium-binding EF-hand family protein 0.59 0.32 -0.31
52 AT2G46600 Calcium-binding EF-hand family protein -0.58 0.31 -0.3
53 AT5G38170 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.58 0.32 -0.31
54 AT3G30650 transposable element gene 0.58 0.31 -0.31
55 AT3G28610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.58 0.33 -0.33
56 AT5G43150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.58 0.31 -0.32
57 AT4G07580 transposable element gene -0.58 0.31 -0.31
58 AT1G35490 bZIP family transcription factor -0.57 0.32 -0.3
59 AT4G39650 gamma-glutamyl transpeptidase 2 gamma-glutamyl transpeptidase 2 0.57 0.31 -0.32
60 AT1G20430 unknown protein; Has 29 Blast hits to 29 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.3 -0.3
61 AT2G05600 F-box associated ubiquitination effector family protein -0.57 0.32 -0.33
62 AT2G20350 Integrase-type DNA-binding superfamily protein -0.57 0.32 -0.32
63 AT4G32180 pantothenate kinase 2 pantothenate kinase 2,
pantothenate kinase 2		 0.57 0.32 -0.32
64 AT3G56630 cytochrome P450, family 94, subfamily D, polypeptide 2 cytochrome P450, family 94,
subfamily D, polypeptide 2		 0.57 0.29 -0.32
65 AT1G54450 Calcium-binding EF-hand family protein 0.56 0.32 -0.33
66 AT5G53480 ARM repeat superfamily protein 0.56 0.32 -0.3
67 AT2G10465 transposable element gene -0.55 0.32 -0.31
68 AT1G67370 DNA-binding HORMA family protein ASYNAPTIC 1, ATASY1 -0.55 0.32 -0.31
69 AT1G21870 golgi nucleotide sugar transporter 5 golgi nucleotide sugar transporter
5		 -0.55 0.33 -0.33
70 AT5G14990 BEST Arabidopsis thaliana protein match is: myosin heavy
chain-related (TAIR:AT2G34730.1); Has 8284 Blast hits to
6001 proteins in 578 species: Archae - 107; Bacteria - 678;
Metazoa - 3983; Fungi - 607; Plants - 315; Viruses - 16;
Other Eukaryotes - 2578 (source: NCBI BLink).		 -0.55 0.32 -0.32
71 AT5G22600 FBD / Leucine Rich Repeat domains containing protein -0.54 0.3 -0.32
72 AT5G39130 RmlC-like cupins superfamily protein -0.54 0.34 -0.3
73 AT5G36650 transposable element gene -0.54 0.3 -0.29
74 AT5G25380 cyclin a2;1 cyclin a2;1 -0.54 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
75 C0015 p-Coumaric acid - 4-Coumarate scopoletin biosynthesis,
free phenylpropanoid acid biosynthesis,
phenylpropanoid biosynthesis,
simple coumarins biosynthesis,
4-hydroxybenzoate biosynthesis V,
suberin biosynthesis,
phenylpropanoid biosynthesis, initial reactions,
flavonoid biosynthesis 		-0.64 0.41 -0.42 C0015
76 C0098 Glucose D-Glucose alpha-D-glucose; beta-D-glucose trehalose degradation II (trehalase),
indole glucosinolate breakdown (active in intact plant cell),
coumarin biosynthesis (via 2-coumarate),
glucosinolate biosynthesis from tryptophan,
sinapate ester biosynthesis,
GDP-glucose biosynthesis,
coniferin metabolism,
melibiose degradation,
indole glucosinolate breakdown (insect chewing induced) 		-0.59 0.3 -0.32 C0098