AT3G08840 : -
Query Information
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AGICode AT3G08840
Description D-alanine--D-alanine ligase family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G08840 D-alanine--D-alanine ligase family 1 0.32 -0.31
2 AT2G40830 RING-H2 finger C1A RING-H2 finger C1A 0.81 0.28 -0.33
3 AT3G23830 glycine-rich RNA-binding protein 4 AtGRP4, GR-RBP4, glycine-rich
RNA-binding protein 4		 -0.79 0.31 -0.3
4 AT5G15860 prenylcysteine methylesterase prenylcysteine methylesterase,
Isoprenylcysteine methylesterase,
prenylcysteine methylesterase		 0.76 0.33 -0.3
5 AT4G30930 Ribosomal protein L21 NUCLEAR FUSION DEFECTIVE 1 -0.76 0.31 -0.32
6 AT4G25630 fibrillarin 2 ATFIB2, fibrillarin 2 -0.76 0.32 -0.3
7 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 0.75 0.31 -0.32
8 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.75 0.32 -0.33
9 AT4G10450 Ribosomal protein L6 family -0.75 0.31 -0.32
10 AT3G63520 carotenoid cleavage dioxygenase 1 CAROTENOID CLEAVAGE DIOXYGENASE 1,
ATNCED1, carotenoid cleavage
dioxygenase 1, NCED1		 0.75 0.32 -0.33
11 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8		 -0.75 0.31 -0.33
12 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B -0.74 0.32 -0.32
13 AT3G54360 zinc ion binding 0.74 0.31 -0.31
14 AT1G23410 Ribosomal protein S27a / Ubiquitin family protein -0.74 0.32 -0.33
15 AT1G63660 GMP synthase (glutamine-hydrolyzing), putative / glutamine
amidotransferase, putative		 -0.74 0.29 -0.32
16 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57		 -0.73 0.32 -0.31
17 AT2G19380 RNA recognition motif (RRM)-containing protein -0.73 0.32 -0.33
18 AT1G55280 Lipase/lipooxygenase, PLAT/LH2 family protein 0.73 0.32 -0.3
19 AT5G22440 Ribosomal protein L1p/L10e family -0.73 0.32 -0.31
20 AT3G52880 monodehydroascorbate reductase 1 monodehydroascorbate reductase 1,
monodehydroascorbate reductase 1		 0.73 0.32 -0.29
21 AT3G29780 ralf-like 27 ralf-like 27 -0.72 0.32 -0.34
22 AT2G35490 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.72 0.32 -0.32
23 AT4G19860 alpha/beta-Hydrolases superfamily protein 0.72 0.31 -0.29
24 AT3G21360 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.72 0.31 -0.32
25 AT2G13820 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP2, xylogen protein 2 -0.72 0.32 -0.32
26 AT5G02790 Glutathione S-transferase family protein Glutathione transferase L3 0.72 0.3 -0.31
27 AT5G08180 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.72 0.34 -0.31
28 AT4G32720 La protein 1 La protein 1, La protein 1 -0.72 0.31 -0.32
29 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10		 -0.72 0.31 -0.33
30 AT2G35605 SWIB/MDM2 domain superfamily protein -0.72 0.31 -0.32
31 AT5G57120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleolus;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: LisH
dimerisation motif (InterPro:IPR006594), SRP40, C-terminal
(InterPro:IPR007718); Has 101969 Blast hits to 55488
proteins in 2506 species: Archae - 424; Bacteria - 13843;
Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses -
569; Other Eukaryotes - 34792 (source: NCBI BLink).		 -0.72 0.33 -0.32
32 AT4G29890 choline monooxygenase, putative (CMO-like) 0.71 0.31 -0.31
33 AT3G44750 histone deacetylase 3 ATHD2A, HISTONE DEACETYLASE 2A,
histone deacetylase 3, HDT1		 -0.71 0.32 -0.31
34 AT2G31800 Integrin-linked protein kinase family 0.71 0.3 -0.33
35 AT5G62440 Protein of unknown function (DUF3223) -0.71 0.33 -0.33
36 AT3G11550 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 2		 -0.71 0.31 -0.32
37 AT4G37270 heavy metal atpase 1 ARABIDOPSIS THALIANA HEAVY METAL
ATPASE 1, heavy metal atpase 1		 0.7 0.33 -0.28
38 AT4G29070 Phospholipase A2 family protein 0.7 0.31 -0.28
39 AT5G27330 Prefoldin chaperone subunit family protein -0.7 0.32 -0.31
40 AT1G60080 3'-5'-exoribonuclease family protein -0.7 0.33 -0.31
41 AT2G47390 Prolyl oligopeptidase family protein 0.7 0.32 -0.33
42 AT4G25090 Riboflavin synthase-like superfamily protein -0.7 0.34 -0.32
43 AT1G03360 ribosomal RNA processing 4 ribosomal RNA processing 4,
ribosomal RNA processing 4		 -0.7 0.31 -0.31
44 AT5G56270 WRKY DNA-binding protein 2 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 2, WRKY
DNA-binding protein 2		 0.7 0.31 -0.3
45 AT2G20960 Arabidopsis phospholipase-like protein (PEARLI 4) family pEARLI4 0.7 0.33 -0.31
46 AT1G11670 MATE efflux family protein -0.7 0.32 -0.31
47 AT4G38460 geranylgeranyl reductase geranylgeranyl reductase 0.69 0.31 -0.31
48 AT3G15840 post-illumination chlorophyll fluorescence increase post-illumination chlorophyll
fluorescence increase		 0.69 0.32 -0.32
49 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 0.69 0.3 -0.3
50 AT3G56900 Transducin/WD40 repeat-like superfamily protein -0.69 0.31 -0.32
51 AT2G43050 Plant invertase/pectin methylesterase inhibitor superfamily ATPMEPCRD -0.69 0.32 -0.3
52 AT3G51800 metallopeptidase M24 family protein A. THALIANA ERBB-3 BINDING PROTEIN
1, ATG2, ERBB-3 BINDING PROTEIN 1		 -0.69 0.3 -0.32
53 AT1G68570 Major facilitator superfamily protein 0.69 0.29 -0.34
54 AT5G50920 CLPC homologue 1 ATHSP93-V, CLPC, CLPC homologue 1,
DE-REGULATED CAO ACCUMULATION 1,
HEAT SHOCK PROTEIN 93-V		 0.69 0.33 -0.31
55 AT3G24210 Ankyrin repeat family protein -0.69 0.32 -0.33
56 AT3G60360 embryo sac development arrest 14 EMBRYO SAC DEVELOPMENT ARREST 14,
U3 SMALL NUCLEOLAR RNA-ASSOCIATED
PROTEIN 11		 -0.69 0.29 -0.32
57 AT3G05060 NOP56-like pre RNA processing ribonucleoprotein -0.69 0.32 -0.32
58 AT1G78890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.69 0.29 -0.31
59 AT1G72730 DEA(D/H)-box RNA helicase family protein -0.69 0.32 -0.31
60 AT3G46210 Ribosomal protein S5 domain 2-like superfamily protein -0.69 0.31 -0.3
61 AT5G62440 Protein of unknown function (DUF3223) -0.69 0.34 -0.31
62 AT3G11830 TCP-1/cpn60 chaperonin family protein -0.69 0.31 -0.31
63 AT1G19520 pentatricopeptide (PPR) repeat-containing protein NUCLEAR FUSION DEFECTIVE 5 -0.68 0.31 -0.3
64 AT1G07230 non-specific phospholipase C1 non-specific phospholipase C1 0.68 0.31 -0.3
65 AT5G59240 Ribosomal protein S8e family protein -0.68 0.32 -0.32
66 AT4G25320 AT hook motif DNA-binding family protein -0.68 0.31 -0.3
67 AT2G36290 alpha/beta-Hydrolases superfamily protein -0.68 0.34 -0.32
68 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 0.68 0.31 -0.33
69 AT1G77690 like AUX1 3 like AUX1 3 -0.68 0.31 -0.35
70 AT2G31725 Eukaryotic protein of unknown function (DUF842) -0.68 0.32 -0.35
71 AT2G19670 protein arginine methyltransferase 1A ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 1A,
protein arginine methyltransferase
1A		 -0.68 0.32 -0.32
72 AT4G19030 NOD26-like major intrinsic protein 1 AT-NLM1, NOD26-LIKE MAJOR
INTRINSIC PROTEIN 1, NOD26-LIKE
INTRINSIC PROTEIN 1;1, NOD26-like
major intrinsic protein 1		 -0.67 0.32 -0.33
73 AT5G56500 TCP-1/cpn60 chaperonin family protein chaperonin-60beta3 -0.67 0.29 -0.31
74 AT1G07830 ribosomal protein L29 family protein -0.67 0.32 -0.31
75 AT3G02050 K+ uptake transporter 3 ARABIDOPSIS THALIANA POTASSIUM
TRANSPORTER 4, ATKUP3, K+ uptake
transporter 3		 0.67 0.29 -0.34
76 AT1G64880 Ribosomal protein S5 family protein -0.67 0.34 -0.31
77 AT1G73040 Mannose-binding lectin superfamily protein 0.67 0.31 -0.31
78 AT4G17940 Tetratricopeptide repeat (TPR)-like superfamily protein 0.67 0.32 -0.29
79 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 -0.67 0.31 -0.33
80 AT4G14930 Survival protein SurE-like phosphatase/nucleotidase 0.67 0.32 -0.3
81 AT3G05900 neurofilament protein-related -0.67 0.33 -0.3
82 AT2G40420 Transmembrane amino acid transporter family protein 0.66 0.3 -0.31
83 AT4G04940 transducin family protein / WD-40 repeat family protein -0.66 0.3 -0.33
84 AT5G60730 Anion-transporting ATPase -0.66 0.32 -0.33
85 AT1G33860 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.66 0.32 -0.31
86 AT3G18200 nodulin MtN21 /EamA-like transporter family protein -0.66 0.33 -0.32
87 AT3G22660 rRNA processing protein-related -0.66 0.33 -0.34
88 AT5G10010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64910.1); Has 33260
Blast hits to 16857 proteins in 1270 species: Archae - 88;
Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants -
1371; Viruses - 424; Other Eukaryotes - 13285 (source: NCBI
BLink).		 -0.66 0.32 -0.29
89 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.65 0.34 -0.32
90 AT1G15060 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 0.65 0.31 -0.3
91 AT5G65970 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 10,
MILDEW RESISTANCE LOCUS O 10		 -0.65 0.33 -0.32
92 AT1G79760 downstream target of AGL15-4 downstream target of AGL15-4 -0.65 0.31 -0.31
93 AT5G51490 Plant invertase/pectin methylesterase inhibitor superfamily -0.65 0.3 -0.33
94 AT3G02490 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.32 -0.29
95 AT1G25260 Ribosomal protein L10 family protein -0.65 0.31 -0.32
96 AT4G33490 Eukaryotic aspartyl protease family protein 0.65 0.33 -0.32
97 AT2G30210 laccase 3 laccase 3 -0.65 0.31 -0.3
98 AT1G16060 ARIA-interacting double AP2 domain protein ARIA-interacting double AP2 domain
protein		 -0.65 0.31 -0.29
99 AT3G01260 Galactose mutarotase-like superfamily protein -0.65 0.29 -0.32
100 AT3G56140 Protein of unknown function (DUF399 and DUF3411) 0.65 0.31 -0.3
101 AT1G63160 replication factor C 2 EMBRYO DEFECTIVE 2811, replication
factor C 2		 -0.65 0.34 -0.31
102 AT2G39990 eukaryotic translation initiation factor 2 Arabidopsis thaliana eukaryotic
translation initiation factor 3
subunit F, eukaryotic translation
initiation factor 2, eukaryotic
translation initiation factor 3
subunit F		 -0.65 0.32 -0.3
103 AT4G26160 atypical CYS HIS rich thioredoxin 1 atypical CYS HIS rich thioredoxin
1		 0.65 0.31 -0.32
104 AT2G36100 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 1		 -0.65 0.32 -0.32
105 AT4G34360 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.65 0.29 -0.33
106 AT3G46040 ribosomal protein S15A D ribosomal protein S15A D -0.65 0.33 -0.31
107 AT1G48320 Thioesterase superfamily protein 0.64 0.33 -0.33
108 AT2G14080 Disease resistance protein (TIR-NBS-LRR class) family 0.64 0.31 -0.32
109 AT5G26570 catalytics;carbohydrate kinases;phosphoglucan, water
dikinases		 ATGWD3, OK1, PHOSPHOGLUCAN WATER
DIKINASE		 0.64 0.3 -0.3
110 AT3G46980 phosphate transporter 4;3 phosphate transporter 4;3 0.63 0.31 -0.34
111 AT2G15960 unknown protein; Has 14 Blast hits to 14 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.33 -0.31
112 AT3G07870 F-box and associated interaction domains-containing protein 0.63 0.31 -0.31
113 AT4G18975 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.3 -0.33
114 AT4G36910 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 1,
CYSTATHIONE [BETA]-SYNTHASE
DOMAIN-CONTAINING PROTEIN 2, LOSS
OF THE TIMING OF ET AND JA
BIOSYNTHESIS 2		 0.63 0.3 -0.3
115 AT4G15475 F-box/RNI-like superfamily protein 0.63 0.34 -0.3