AT3G07410 : RAB GTPase homolog A5B
Query Information
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AGICode AT3G07410
Description RAB GTPase homolog A5B
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G07410 RAB GTPase homolog A5B RAB GTPase homolog A5B, RAB GTPase
homolog A5B		 1 0.3 -0.32
2 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 -0.82 0.32 -0.31
3 AT3G13330 proteasome activating protein 200 proteasome activating protein 200 -0.79 0.3 -0.32
4 AT4G14220 RING-H2 group F1A RING-H2 group F1A -0.78 0.34 -0.31
5 AT1G80690 PPPDE putative thiol peptidase family protein 0.78 0.29 -0.32
6 AT1G04780 Ankyrin repeat family protein -0.77 0.29 -0.32
7 AT2G26920 Ubiquitin-associated/translation elongation factor EF1B
protein		 -0.76 0.31 -0.3
8 AT5G12900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G12330.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.76 0.3 -0.31
9 AT2G39700 expansin A4 ATEXP4, expansin A4, ATHEXP ALPHA
1.6, expansin A4		 0.75 0.32 -0.31
10 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING -0.75 0.33 -0.33
11 AT3G11650 NDR1/HIN1-like 2 NDR1/HIN1-like 2 0.75 0.33 -0.31
12 AT1G10940 Protein kinase superfamily protein ARABIDOPSIS SERINE/THREONINE
KINASE 1, SUCROSE NONFERMENTING
1-RELATED PROTEIN KINASE 2-4,
SNF1-related protein kinase 2.4,
SRK2A		 -0.75 0.3 -0.31
13 AT4G02610 Aldolase-type TIM barrel family protein 0.74 0.3 -0.33
14 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 -0.74 0.32 -0.29
15 AT5G64230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G19920.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.74 0.32 -0.33
16 AT2G24150 heptahelical protein 3 heptahelical protein 3 0.74 0.32 -0.3
17 AT5G49930 zinc knuckle (CCHC-type) family protein embryo defective 1441 -0.74 0.31 -0.32
18 AT2G38160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits
to 731 proteins in 211 species: Archae - 0; Bacteria - 236;
Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32;
Other Eukaryotes - 91 (source: NCBI BLink).		 0.74 0.33 -0.33
19 AT2G19450 membrane bound O-acyl transferase (MBOAT) family protein ABX45, AS11, Arabidopsis thaliana
acyl-CoA:diacylglycerol
acyltransferase,
acyl-CoA:diacylglycerol
acyltransferase 1, RDS1,
TRIACYLGLYCEROL BIOSYNTHESIS
DEFECT 1		 -0.73 0.3 -0.33
20 AT3G01690 alpha/beta-Hydrolases superfamily protein 0.73 0.31 -0.33
21 AT4G14580 CBL-interacting protein kinase 4 CBL-interacting protein kinase 4,
SNF1-RELATED PROTEIN KINASE 3.3		 -0.73 0.31 -0.33
22 AT1G06420 unknown protein; Has 1017 Blast hits to 654 proteins in 124
species: Archae - 0; Bacteria - 39; Metazoa - 232; Fungi -
69; Plants - 40; Viruses - 0; Other Eukaryotes - 637
(source: NCBI BLink).		 0.73 0.32 -0.32
23 AT4G02710 Kinase interacting (KIP1-like) family protein -0.73 0.32 -0.31
24 AT4G11380 Adaptin family protein -0.72 0.31 -0.31
25 AT5G01290 mRNA capping enzyme family protein -0.72 0.31 -0.32
26 AT5G43130 TBP-associated factor 4 TBP-associated factor 4,
TBP-associated factor 4B		 -0.72 0.31 -0.32
27 AT1G01040 dicer-like 1 ABNORMAL SUSPENSOR 1, DICER-LIKE
1, CARPEL FACTORY, dicer-like 1,
EMBRYO DEFECTIVE 60, EMBRYO
DEFECTIVE 76, SHORT INTEGUMENTS 1,
SUSPENSOR 1		 -0.71 0.32 -0.29
28 AT4G11740 Ubiquitin-like superfamily protein SAY1 -0.71 0.3 -0.32
29 AT3G55270 mitogen-activated protein kinase phosphatase 1 ARABIDOPSIS MITOGEN-ACTIVATED
PROTEIN KINASE PHOSPHATASE 1,
mitogen-activated protein kinase
phosphatase 1		 -0.71 0.3 -0.29
30 AT5G15400 U-box domain-containing protein -0.71 0.36 -0.31
31 AT1G06780 galacturonosyltransferase 6 galacturonosyltransferase 6 -0.7 0.32 -0.3
32 AT2G40280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.7 0.32 -0.3
33 AT5G65720 nitrogen fixation S (NIFS)-like 1 ARABIDOPSIS THALIANA NITROGEN
FIXATION S (NIFS)-LIKE 1, NITROGEN
FIXATION S HOMOLOG 1, nitrogen
fixation S (NIFS)-like 1, NITROGEN
FIXATION S HOMOLOG 1		 -0.7 0.32 -0.32
34 AT3G07580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 12 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48335.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.7 0.3 -0.33
35 AT5G66490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G50900.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.7 0.32 -0.31
36 AT1G32130 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS1 (FROM
YEAST INTERACTS WITH SPT6), HIGH
NITROGEN INSENSITIVE 9, IWS1		 -0.7 0.32 -0.32
37 AT1G74250 DNAJ heat shock N-terminal domain-containing protein -0.7 0.32 -0.31
38 AT5G42220 Ubiquitin-like superfamily protein -0.7 0.32 -0.32
39 AT2G37520 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 -0.69 0.31 -0.3
40 AT1G52320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
plasma membrane; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF632
(InterPro:IPR006867); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF630 and DUF632)
(TAIR:AT5G25590.1); Has 517 Blast hits to 513 proteins in
62 species: Archae - 6; Bacteria - 6; Metazoa - 50; Fungi -
2; Plants - 427; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 -0.69 0.32 -0.31
41 AT3G19170 presequence protease 1 presequence protease 1, ATZNMP,
presequence protease 1		 -0.69 0.32 -0.3
42 AT3G53190 Pectin lyase-like superfamily protein 0.69 0.3 -0.33
43 AT3G24180 Beta-glucosidase, GBA2 type family protein -0.69 0.3 -0.31
44 AT4G02350 exocyst complex component sec15B exocyst complex component sec15B -0.69 0.33 -0.3
45 AT4G18910 NOD26-like intrinsic protein 1;2 NOD26-LIKE INTRINSIC PROTEIN 2,
NOD26-like intrinsic protein 1;2,
NOD26-LIKE INTRINSIC PROTEIN 2		 0.69 0.32 -0.34
46 AT1G10390 Nucleoporin autopeptidase -0.69 0.32 -0.32
47 AT1G32530 RING/U-box superfamily protein -0.69 0.32 -0.32
48 AT4G11160 Translation initiation factor 2, small GTP-binding protein -0.69 0.32 -0.31
49 AT3G58570 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.69 0.3 -0.31
50 AT5G63120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.69 0.3 -0.32
51 AT5G27610 DIRP ;Myb-like DNA-binding domain ALWAYS EARLY 1, ARABIDOPSIS
THALIANA ALWAYS EARLY 1		 -0.69 0.31 -0.32
52 AT2G18915 LOV KELCH protein 2 ADAGIO 2, LOV KELCH protein 2 -0.68 0.3 -0.3
53 AT3G25980 DNA-binding HORMA family protein MITOTIC ARREST-DEFICIENT 2 0.68 0.33 -0.32
54 AT3G42725 Putative membrane lipoprotein 0.68 0.31 -0.32
55 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 -0.68 0.3 -0.32
56 AT5G56190 Transducin/WD40 repeat-like superfamily protein -0.68 0.31 -0.33
57 AT1G07160 Protein phosphatase 2C family protein -0.68 0.32 -0.33
58 AT4G12690 Plant protein of unknown function (DUF868) 0.68 0.32 -0.29
59 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein -0.67 0.31 -0.32
60 AT4G12240 zinc finger (C2H2 type) family protein -0.67 0.31 -0.3
61 AT3G63070 Tudor/PWWP/MBT domain-containing protein -0.67 0.33 -0.34
62 AT1G53050 Protein kinase superfamily protein -0.67 0.33 -0.33
63 AT2G15320 Leucine-rich repeat (LRR) family protein -0.67 0.29 -0.31
64 AT2G24762 glutamine dumper 4 glutamine dumper 4, glutamine
dumper 4		 0.67 0.33 -0.33
65 AT1G77600 ARM repeat superfamily protein -0.67 0.31 -0.33
66 AT1G47240 NRAMP metal ion transporter 2 ATNRAMP2, NRAMP metal ion
transporter 2		 -0.67 0.31 -0.3
67 AT1G34550 Protein of unknown function (DUF616) EMBRYO DEFECTIVE 2756 -0.67 0.33 -0.3
68 AT4G32290 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.67 0.31 -0.33
69 AT1G60890 Phosphatidylinositol-4-phosphate 5-kinase family protein -0.67 0.31 -0.33
70 AT1G67750 Pectate lyase family protein 0.67 0.32 -0.34
71 AT5G38840 SMAD/FHA domain-containing protein -0.66 0.34 -0.32
72 AT3G27400 Pectin lyase-like superfamily protein 0.66 0.32 -0.29
73 AT3G55320 P-glycoprotein 20 ATP-binding cassette B20,
P-glycoprotein 20		 -0.66 0.33 -0.29
74 AT5G43560 TRAF-like superfamily protein -0.66 0.31 -0.32
75 AT2G37790 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C10		 0.66 0.32 -0.3
76 AT3G43300 HOPM interactor 7 HOPM interactor 7, BFA-VISUALIZED
ENDOCYTIC TRAFFICKING DEFECTIVE1		 -0.66 0.31 -0.32
77 AT4G32640 Sec23/Sec24 protein transport family protein -0.66 0.3 -0.32
78 AT4G35550 WUSCHEL related homeobox 13 ATWOX13, HB-4, WUSCHEL related
homeobox 13		 0.66 0.31 -0.31
79 AT3G09350 Fes1A Fes1A -0.66 0.31 -0.31
80 AT1G68430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G66890.1); Has 35 Blast
hits to 35 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.29 -0.31
81 AT5G53440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.66 0.3 -0.31
82 AT2G36850 glucan synthase-like 8 GLUCAN SYNTHASE-LIKE 8, ATGSL8,
CHORUS, GSL08, glucan
synthase-like 8		 -0.66 0.31 -0.31
83 AT3G09560 Lipin family protein PHOSPHATIDIC ACID PHOSPHOHYDROLASE
1, PHOSPHATIDIC ACID
PHOSPHOHYDROLASE 1		 -0.65 0.32 -0.34
84 AT3G01040 galacturonosyltransferase 13 galacturonosyltransferase 13 -0.65 0.33 -0.32
85 AT3G59820 LETM1-like protein -0.65 0.29 -0.3
86 AT5G27540 MIRO-related GTP-ase 1 embryo defective 2473,
MIRO-related GTP-ase 1		 -0.65 0.33 -0.34
87 AT1G23000 Heavy metal transport/detoxification superfamily protein 0.65 0.3 -0.31
88 AT1G56560 Plant neutral invertase family protein alkaline/neutral invertase A -0.65 0.31 -0.32
89 AT5G22450 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G19390.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.65 0.31 -0.31
90 AT3G13750 beta galactosidase 1 beta galactosidase 1,
beta-galactosidase 1		 0.65 0.31 -0.34
91 AT5G65620 Zincin-like metalloproteases family protein -0.65 0.29 -0.31
92 AT3G10380 subunit of exocyst complex 8 SUBUNIT OF EXOCYST COMPLEX 8,
subunit of exocyst complex 8		 -0.65 0.33 -0.32
93 AT5G06600 ubiquitin-specific protease 12 AtUBP12, ubiquitin-specific
protease 12		 -0.65 0.29 -0.31
94 AT2G16950 transportin 1 TRANSPORTIN 1, transportin 1 -0.65 0.32 -0.31
95 AT1G79600 Protein kinase superfamily protein -0.65 0.33 -0.31
96 AT3G59770 sacI homology domain-containing protein / WW
domain-containing protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
ACTIN 9, SUPPRESSOR OF ACTIN 9		 -0.65 0.31 -0.31
97 AT3G15980 Coatomer, beta' subunit -0.64 0.31 -0.34
98 AT5G26240 chloride channel D ATCLC-D, chloride channel D -0.64 0.31 -0.32
99 AT3G19540 Protein of unknown function (DUF620) 0.64 0.33 -0.33
100 AT4G05420 damaged DNA binding protein 1A damaged DNA binding protein 1A -0.64 0.31 -0.31
101 AT3G11910 ubiquitin-specific protease 13 AtUBP13, ubiquitin-specific
protease 13		 -0.64 0.34 -0.31
102 AT5G03905 Iron-sulphur cluster biosynthesis family protein -0.64 0.33 -0.3
103 AT1G17350 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 0.64 0.32 -0.32
104 AT3G51120 DNA binding;zinc ion binding;nucleic acid binding;nucleic
acid binding		 -0.63 0.31 -0.31
105 AT1G21380 Target of Myb protein 1 -0.63 0.31 -0.32
106 AT1G07310 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.63 0.29 -0.32
107 AT1G04300 TRAF-like superfamily protein -0.63 0.32 -0.31
108 AT3G51550 Malectin/receptor-like protein kinase family protein FERONIA -0.63 0.32 -0.29
109 AT2G41790 Insulinase (Peptidase family M16) family protein -0.63 0.32 -0.31
110 AT1G71820 SEC6 SEC6 -0.63 0.31 -0.31
111 AT4G08180 OSBP(oxysterol binding protein)-related protein 1C OSBP(oxysterol binding
protein)-related protein 1C		 -0.63 0.32 -0.29
112 AT1G30510 root FNR 2 root FNR 2, root FNR 2 0.63 0.29 -0.32
113 AT3G12680 floral homeotic protein (HUA1) ENHANCER OF AG-4 1 -0.63 0.33 -0.29
114 AT1G61380 S-domain-1 29 S-domain-1 29 -0.63 0.3 -0.32
115 AT1G28400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G33850.1); Has 45374 Blast hits to 18870 proteins
in 668 species: Archae - 72; Bacteria - 1460; Metazoa -
1191; Fungi - 1038; Plants - 174; Viruses - 64; Other
Eukaryotes - 41375 (source: NCBI BLink).		 0.63 0.32 -0.32
116 AT3G20720 unknown protein; Has 184 Blast hits to 181 proteins in 66
species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi -
0; Plants - 40; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 -0.63 0.31 -0.31
117 AT2G19390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G29790.1); Has 203 Blast hits
to 188 proteins in 60 species: Archae - 0; Bacteria - 11;
Metazoa - 24; Fungi - 34; Plants - 93; Viruses - 0; Other
Eukaryotes - 41 (source: NCBI BLink).		 -0.63 0.3 -0.3
118 AT5G11780 unknown protein; Has 37 Blast hits to 37 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.33 -0.31
119 AT5G60230 splicing endonuclease 2 SPLICING ENDONUCLEASE 2, splicing
endonuclease 2		 0.62 0.31 -0.29
120 AT1G71180 6-phosphogluconate dehydrogenase family protein 0.62 0.31 -0.3
121 AT3G57860 UV-B-insensitive 4-like GIGAS CELL 1, OMISSION OF SECOND
DIVISION, UV-B-insensitive 4-like		 0.61 0.31 -0.31
122 AT5G47830 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 0.61 0.33 -0.31
123 AT5G57410 Afadin/alpha-actinin-binding protein 0.61 0.31 -0.31
124 AT1G14900 high mobility group A high mobility group A 0.61 0.31 -0.32
125 AT3G61860 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31,
arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31		 0.61 0.31 -0.31
126 AT4G35620 Cyclin B2;2 Cyclin B2;2 0.61 0.33 -0.32
127 AT3G50070 CYCLIN D3;3 CYCLIN D3;3 0.6 0.3 -0.31
128 AT5G19340 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G05980.1); Has 1000 Blast hits
to 906 proteins in 61 species: Archae - 0; Bacteria - 4;
Metazoa - 62; Fungi - 36; Plants - 128; Viruses - 4; Other
Eukaryotes - 766 (source: NCBI BLink).		 0.6 0.31 -0.33
129 AT1G59580 mitogen-activated protein kinase homolog 2 mitogen-activated protein kinase
homolog 2, mitogen-activated
protein kinase homolog 2		 0.6 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
130 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		-0.78 0.46 -0.45 C0105
131 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		0.76 0.43 -0.46 C0228
132 C0117 Hydroxyproline (2S,4R)-Hydroxyproline 4-Hydroxy-L-proline protein precursor -0.7 0.44 -0.45 C0117