AT3G07490 : ARF-GAP domain 11
Query Information
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AGICode AT3G07490
Description ARF-GAP domain 11
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G07490 ARF-GAP domain 11 ARF-GAP domain 11, AtCML3,
calmodulin-like 3		 1 0.28 -0.3
2 AT4G28850 xyloglucan endotransglucosylase/hydrolase 26 ATXTH26, xyloglucan
endotransglucosylase/hydrolase 26		 0.84 0.31 -0.32
3 AT2G26410 IQ-domain 4 IQ-domain 4 0.82 0.31 -0.3
4 AT4G08410 Proline-rich extensin-like family protein 0.82 0.32 -0.3
5 AT1G33700 Beta-glucosidase, GBA2 type family protein 0.79 0.32 -0.32
6 AT3G54590 hydroxyproline-rich glycoprotein hydroxyproline-rich glycoprotein,
hydroxyproline-rich glycoprotein		 0.78 0.32 -0.34
7 AT4G30320 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.77 0.31 -0.32
8 AT5G57530 xyloglucan endotransglucosylase/hydrolase 12 AtXTH12, xyloglucan
endotransglucosylase/hydrolase 12		 0.77 0.32 -0.32
9 AT1G12560 expansin A7 ATEXP7, expansin A7, ATHEXP ALPHA
1.26, EXP7, expansin A7		 0.76 0.3 -0.3
10 AT5G19790 related to AP2 11 related to AP2 11 0.75 0.32 -0.33
11 AT2G46860 pyrophosphorylase 3 pyrophosphorylase 3,
pyrophosphorylase 3		 0.74 0.31 -0.32
12 AT4G34580 Sec14p-like phosphatidylinositol transfer family protein CAN OF WORMS1, SHORT ROOT HAIR 1 0.73 0.3 -0.32
13 AT1G66210 Subtilisin-like serine endopeptidase family protein 0.73 0.32 -0.32
14 AT1G34330 pseudogene, putative peroxidase, similar to anionic
peroxidase GI:559235 from (Petroselinum crispum); blastp
match of 35% identity and 2.3e-53 P-value to
GP|21426121|gb|AAM52318.1|AC105363_7|AC105363 Putative
peroxidase {Oryza sativa (japonica cultivar-group)}		 0.73 0.32 -0.34
15 AT4G31250 Leucine-rich repeat protein kinase family protein 0.73 0.31 -0.33
16 AT1G11920 Pectin lyase-like superfamily protein 0.72 0.31 -0.32
17 AT4G19680 iron regulated transporter 2 IRON REGULATED TRANSPORTER 2, iron
regulated transporter 2		 0.71 0.31 -0.33
18 AT2G34180 CBL-interacting protein kinase 13 WPL4-LIKE 2, CBL-interacting
protein kinase 13, SNF1-RELATED
PROTEIN KINASE 3.7, WPL4-LIKE 2		 0.7 0.33 -0.3
19 AT3G15370 expansin 12 ATEXP12, expansin 12, ATHEXP ALPHA
1.24, EXPANSIN 12, expansin 12		 0.7 0.31 -0.32
20 AT5G19800 hydroxyproline-rich glycoprotein family protein 0.7 0.31 -0.31
21 AT3G51540 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G08670.1); Has 22744 Blast
hits to 9965 proteins in 783 species: Archae - 64; Bacteria
- 2760; Metazoa - 8515; Fungi - 3864; Plants - 499; Viruses
- 702; Other Eukaryotes - 6340 (source: NCBI BLink).		 0.7 0.33 -0.3
22 AT3G54040 PAR1 protein 0.7 0.31 -0.32
23 AT3G05280 Integral membrane Yip1 family protein 0.7 0.32 -0.31
24 AT4G20450 Leucine-rich repeat protein kinase family protein 0.69 0.3 -0.32
25 AT5G17480 pollen calcium-binding protein 1 pollen calcium-binding protein 1,
pollen calcium-binding protein 1		 0.69 0.3 -0.31
26 AT4G02270 root hair specific 13 root hair specific 13 0.69 0.34 -0.33
27 AT3G61640 arabinogalactan protein 20 arabinogalactan protein 20,
Arabinogalactan protein 20		 0.69 0.3 -0.31
28 AT2G20520 FASCICLIN-like arabinogalactan 6 FASCICLIN-like arabinogalactan 6 0.69 0.34 -0.33
29 AT4G04840 methionine sulfoxide reductase B6 methionine sulfoxide reductase B6,
methionine sulfoxide reductase B6		 0.69 0.33 -0.32
30 AT5G06640 Proline-rich extensin-like family protein extensin 10 0.68 0.32 -0.29
31 AT1G52910 Protein of unknown function (DUF1218) 0.68 0.32 -0.3
32 AT4G22640 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.68 0.3 -0.31
33 AT4G23493 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.68 0.31 -0.31
34 AT5G06630 proline-rich extensin-like family protein 0.67 0.3 -0.34
35 AT3G10710 root hair specific 12 root hair specific 12 0.67 0.32 -0.32
36 AT1G65940 pseudogene, similar to Dof zinc finger protein, blastp
match of 61% identity and 1.7e-10 P-value to
GP|4996646|dbj|BAA78575.1||AB028132 Dof zinc finger protein
{Oryza sativa}		 0.67 0.33 -0.32
37 AT5G61350 Protein kinase superfamily protein 0.67 0.3 -0.31
38 AT5G02550 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.31 -0.3
39 AT4G20490 transposable element gene -0.67 0.32 -0.32
40 AT3G43190 sucrose synthase 4 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 4, sucrose synthase 4		 0.67 0.32 -0.3
41 AT5G35190 proline-rich extensin-like family protein extensin 13 0.66 0.32 -0.33
42 AT5G04960 Plant invertase/pectin methylesterase inhibitor superfamily 0.66 0.31 -0.31
43 AT2G24980 Proline-rich extensin-like family protein extensin 6 0.66 0.33 -0.3
44 AT1G62980 expansin A18 ATEXP18, expansin A18, ATHEXP
ALPHA 1.25, EXPANSIN 18, expansin
A18		 0.66 0.31 -0.3
45 AT3G18450 PLAC8 family protein 0.66 0.31 -0.32
46 AT5G56490 D-arabinono-1,4-lactone oxidase family protein 0.66 0.31 -0.31
47 AT4G25820 xyloglucan endotransglucosylase/hydrolase 14 ATXTH14, xyloglucan
endotransglucosylase/hydrolase 14,
xyloglucan endotransglycosylase 9		 0.66 0.34 -0.33
48 AT5G43230 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01810.3); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.66 0.32 -0.31
49 AT3G12150 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2048 (InterPro:IPR019149); Has 421
Blast hits to 334 proteins in 155 species: Archae - 2;
Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43;
Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).		 0.66 0.31 -0.33
50 AT4G30670 Putative membrane lipoprotein 0.66 0.3 -0.32
51 AT1G50930 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G20557.1); Has 215 Blast hits
to 213 proteins in 63 species: Archae - 0; Bacteria - 2;
Metazoa - 83; Fungi - 10; Plants - 45; Viruses - 5; Other
Eukaryotes - 70 (source: NCBI BLink).		 0.65 0.29 -0.29
52 AT4G08490 transposable element gene -0.65 0.29 -0.34
53 AT1G72360 Integrase-type DNA-binding superfamily protein AtERF73, ethylene response factor
73, HYPOXIA RESPONSIVE ERF
(ETHYLENE RESPONSE FACTOR) 1		 0.65 0.33 -0.31
54 AT1G70460 root hair specific 10 proline-rich extensin-like
receptor kinase 13, proline-rich
extensin-like receptor kinase 13,
root hair specific 10		 0.65 0.3 -0.31
55 AT4G18640 Leucine-rich repeat protein kinase family protein morphogenesis of root hair 1 0.65 0.33 -0.31
56 AT2G18450 succinate dehydrogenase 1-2 succinate dehydrogenase 1-2 0.64 0.3 -0.33
57 AT2G25240 Serine protease inhibitor (SERPIN) family protein 0.64 0.33 -0.35
58 AT5G62310 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 INCOMPLETE ROOT HAIR ELONGATION 0.64 0.31 -0.32
59 AT1G48930 glycosyl hydrolase 9C1 glycosyl hydrolase 9C1, glycosyl
hydrolase 9C1		 0.64 0.32 -0.3
60 AT5G05500 Pollen Ole e 1 allergen and extensin family protein MOP10 0.64 0.34 -0.32
61 AT1G19060 Protein of unknown function (DUF626) -0.64 0.3 -0.31
62 AT2G39710 Eukaryotic aspartyl protease family protein -0.64 0.3 -0.32
63 AT1G07990 SIT4 phosphatase-associated family protein -0.63 0.32 -0.32
64 AT3G62680 proline-rich protein 3 ARABIDOPSIS THALIANA PROLINE-RICH
PROTEIN 3, proline-rich protein 3		 0.63 0.3 -0.33
65 AT2G18060 vascular related NAC-domain protein 1 Arabidopsis NAC domain containing
protein 37, vascular related
NAC-domain protein 1		 0.63 0.32 -0.33
66 AT5G10040 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65207.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.63 0.31 -0.33
67 AT4G03760 transposable element gene 0.63 0.32 -0.32
68 AT2G27350 OTU-like cysteine protease family protein otubain-like deubiquitinase 1 -0.63 0.32 -0.31
69 AT5G52250 Transducin/WD40 repeat-like superfamily protein EARLY FLOWERING BY OVEREXPRESSION
1, REPRESSOR OF UV-B
PHOTOMORPHOGENESIS 1		 0.63 0.33 -0.31
70 AT3G01490 Protein kinase superfamily protein 0.63 0.3 -0.3
71 AT5G59700 Protein kinase superfamily protein -0.63 0.31 -0.32
72 AT1G23540 Protein kinase superfamily protein proline-rich extensin like
receptor kinase, INFLORESCENCE
GROWTH INHIBITOR 1, proline-rich
extensin-like receptor kinase 12		 0.63 0.32 -0.31
73 AT2G21460 transposable element gene 0.63 0.29 -0.31
74 AT1G01480 1-amino-cyclopropane-1-carboxylate synthase 2 1-amino-cyclopropane-1-carboxylate
synthase 2, AT-ACC2		 -0.63 0.3 -0.32
75 AT5G03640 Protein kinase superfamily protein 0.63 0.3 -0.32
76 AT1G34510 Peroxidase superfamily protein 0.63 0.33 -0.28
77 AT1G04610 YUCCA 3 YUCCA 3 0.62 0.32 -0.33
78 AT1G54970 proline-rich protein 1 proline-rich protein 1,
proline-rich protein 1, ROOT HAIR
SPECIFIC 7		 0.62 0.3 -0.32
79 AT1G01780 GATA type zinc finger transcription factor family protein PLIM2b 0.62 0.31 -0.31
80 AT1G26710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26720.1); Has 9 Blast hits to
9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.62 0.33 -0.33
81 AT3G23190 HR-like lesion-inducing protein-related 0.62 0.29 -0.32
82 AT3G54870 Armadillo/beta-catenin repeat family protein / kinesin
motor family protein		 ARMADILLO REPEAT-CONTAINING
KINESIN 1, Arabidopsis thaliana
KINESIN Ungrouped clade, gene A,
CA-ROP2 ENHANCER 1, MORPHOGENESIS
OF ROOT HAIR 2		 0.62 0.3 -0.32
83 AT4G09840 unknown protein; Has 25 Blast hits to 25 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 4;
Plants - 9; Viruses - 3; Other Eukaryotes - 5 (source: NCBI
BLink).		 -0.61 0.33 -0.32
84 AT5G59010 Protein kinase protein with tetratricopeptide repeat domain 0.61 0.31 -0.28
85 AT2G17880 Chaperone DnaJ-domain superfamily protein 0.61 0.33 -0.33
86 AT4G09360 NB-ARC domain-containing disease resistance protein -0.61 0.3 -0.33
87 AT4G09990 Protein of unknown function (DUF579) 0.6 0.31 -0.32
88 AT3G12920 SBP (S-ribonuclease binding protein) family protein BOI-related gene 3 0.6 0.31 -0.32
89 AT4G08620 sulphate transporter 1;1 sulphate transporter 1;1 0.6 0.32 -0.34
90 AT3G01730 unknown protein; Has 8 Blast hits to 8 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.31 -0.32
91 AT4G00460 RHO guanyl-nucleotide exchange factor 3 ATROPGEF3, RHO guanyl-nucleotide
exchange factor 3		 0.6 0.31 -0.34
92 AT5G04190 phytochrome kinase substrate 4 phytochrome kinase substrate 4 0.6 0.3 -0.3
93 AT2G15930 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.33 -0.32
94 AT2G33230 YUCCA 7 YUCCA 7 0.6 0.31 -0.33
95 AT2G01390 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 3111 -0.6 0.32 -0.34
96 AT3G49300 proline-rich family protein -0.6 0.3 -0.32
97 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.59 0.33 -0.32
98 AT1G21430 Flavin-binding monooxygenase family protein YUC11 -0.59 0.31 -0.33
99 AT5G05340 Peroxidase superfamily protein -0.59 0.31 -0.31
100 AT4G19780 transposable element gene -0.59 0.31 -0.34
101 AT5G62800 Protein with RING/U-box and TRAF-like domains -0.59 0.34 -0.32
102 AT3G46360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44755.1); Has 4 Blast hits to
4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.59 0.31 -0.32
103 AT3G60790 F-box family protein -0.58 0.33 -0.29
104 AT2G23400 Undecaprenyl pyrophosphate synthetase family protein -0.58 0.3 -0.32
105 AT4G25800 Calmodulin-binding protein -0.58 0.33 -0.32
106 AT4G22680 myb domain protein 85 myb domain protein 85, myb domain
protein 85		 -0.57 0.33 -0.31
107 AT1G53540 HSP20-like chaperones superfamily protein -0.57 0.31 -0.32
108 AT1G15750 Transducin family protein / WD-40 repeat family protein TOPLESS, WUS-INTERACTING PROTEIN 1 -0.57 0.34 -0.31
109 AT2G41690 heat shock transcription factor B3 heat shock transcription factor
B3, HEAT SHOCK TRANSCRIPTION
FACTOR B3, heat shock
transcription factor B3		 -0.57 0.31 -0.31
110 AT5G10880 tRNA synthetase-related / tRNA ligase-related -0.57 0.3 -0.31
111 AT4G27420 ABC-2 type transporter family protein ATP-binding cassette G9 -0.56 0.31 -0.31
112 AT2G30380 Plant protein of unknown function (DUF641) -0.56 0.33 -0.33
113 AT4G27550 trehalose-6-phosphatase synthase S4 ARABIDOPSIS THALIANA TREHALOSE
PHOSPHATASE/SYNTHASE 4,
trehalose-6-phosphatase synthase
S4		 -0.56 0.3 -0.31
114 AT1G53820 RING/U-box superfamily protein -0.55 0.33 -0.33
115 AT2G03170 SKP1-like 14 SKP1-like 14, SKP1-like 14 -0.55 0.31 -0.32
116 AT5G43800 transposable element gene -0.55 0.32 -0.29
117 AT1G77730 Pleckstrin homology (PH) domain superfamily protein -0.55 0.33 -0.34
118 AT3G44030 pseudogene, similar to OSJNBb0043H09.1, blastp match of 40%
identity and 8.4e-38 P-value to
GP|21740634|emb|CAD40195.1||AL606611 OSJNBb0043H09.1 {Oryza
sativa (japonica cultivar-group)}		 -0.53 0.31 -0.33
119 AT4G09490 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.53 0.31 -0.32
120 AT3G62490 transposable element gene -0.53 0.32 -0.31
121 AT1G07380 Neutral/alkaline non-lysosomal ceramidase -0.53 0.34 -0.32
122 AT3G07420 asparaginyl-tRNA synthetase 2 ASPARAGINYL-TRNA SYNTHETASE 2,
asparaginyl-tRNA synthetase 2,
SYNTHETASE C2, ASPARAGINYL-TRNA
SYNTHETASE 2		 -0.52 0.35 -0.32
123 AT4G04490 cysteine-rich RLK (RECEPTOR-like protein kinase) 36 cysteine-rich RLK (RECEPTOR-like
protein kinase) 36		 -0.52 0.31 -0.29
124 AT5G10420 MATE efflux family protein -0.52 0.31 -0.3
125 AT2G05820 transposable element gene -0.52 0.33 -0.31
126 AT4G23330 BEST Arabidopsis thaliana protein match is: eukaryotic
translation initiation factor 3A (TAIR:AT4G11420.1); Has 63
Blast hits to 55 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
127 C0206 Phosphatidylglycerol-34:4 - Phosphatidylglycerol-34:4 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		0.64 0.33 -0.34
128 C0150 Monogalactosyldiacylgycerol-34:3 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		0.62 0.32 -0.35
129 C0078 Digalactosyldiacylglycerol-34:3 - Digalactosyldiacylglycerol-34:3 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.61 0.34 -0.32
130 C0246 Sulfoquinovosyldiacylglycerol-34:2 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis 0.61 0.32 -0.33 C0246
131 C0152 Monogalactosyldiacylgycerol-34:5 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		0.6 0.35 -0.33