AT3G04920 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G04920
Description Ribosomal protein S24e family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G04920 Ribosomal protein S24e family protein 1 0.31 -0.3
2 AT5G35530 Ribosomal protein S3 family protein 0.89 0.33 -0.33
3 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.87 0.3 -0.31
4 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 0.87 0.32 -0.3
5 AT2G34480 Ribosomal protein L18ae/LX family protein 0.87 0.31 -0.32
6 AT5G57290 60S acidic ribosomal protein family 0.86 0.31 -0.31
7 AT3G62870 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.85 0.32 -0.31
8 AT3G02080 Ribosomal protein S19e family protein 0.84 0.31 -0.34
9 AT3G02790 zinc finger (C2H2 type) family protein 0.84 0.32 -0.33
10 AT5G67510 Translation protein SH3-like family protein 0.83 0.3 -0.34
11 AT2G36160 Ribosomal protein S11 family protein 0.83 0.31 -0.33
12 AT1G15250 Zinc-binding ribosomal protein family protein 0.83 0.29 -0.3
13 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 0.83 0.31 -0.3
14 AT2G27330 RNA-binding (RRM/RBD/RNP motifs) family protein 0.83 0.35 -0.33
15 AT5G15200 Ribosomal protein S4 0.82 0.34 -0.31
16 AT5G27700 Ribosomal protein S21e 0.82 0.3 -0.31
17 AT1G69620 ribosomal protein L34 ribosomal protein L34 0.81 0.32 -0.31
18 AT2G20140 AAA-type ATPase family protein regulatory particle AAA-ATPase 2b 0.81 0.32 -0.31
19 AT3G53430 Ribosomal protein L11 family protein 0.81 0.33 -0.31
20 AT4G31985 Ribosomal protein L39 family protein 0.81 0.33 -0.29
21 AT2G18910 hydroxyproline-rich glycoprotein family protein 0.81 0.35 -0.33
22 AT5G41520 RNA binding Plectin/S10 domain-containing protein 0.81 0.33 -0.31
23 AT3G54970 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein		 0.81 0.31 -0.32
24 AT3G52580 Ribosomal protein S11 family protein 0.8 0.31 -0.32
25 AT1G74270 Ribosomal protein L35Ae family protein 0.8 0.31 -0.3
26 AT3G18740 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein receptor-like kinase 902 0.8 0.32 -0.33
27 AT3G16940 calmodulin binding;transcription regulators -0.79 0.29 -0.3
28 AT1G16920 RAB GTPase homolog A1B RAB GTPase homolog A1B, RAB11, RAB
GTPase homolog A1B		 0.79 0.31 -0.31
29 AT4G13170 Ribosomal protein L13 family protein 0.79 0.31 -0.34
30 AT4G19960 K+ uptake permease 9 ATKUP9, HAK9, KT9, K+ uptake
permease 9		 -0.79 0.32 -0.32
31 AT5G20280 sucrose phosphate synthase 1F sucrose phosphate synthase 1F,
sucrose phosphate synthase 1F,
sucrose-phosphate synthase A1		 -0.78 0.3 -0.31
32 AT3G24830 Ribosomal protein L13 family protein 0.78 0.3 -0.29
33 AT3G61960 Protein kinase superfamily protein -0.78 0.3 -0.33
34 AT2G32380 Transmembrane protein 97, predicted 0.78 0.32 -0.31
35 AT3G55380 ubiquitin-conjugating enzyme 14 ubiquitin-conjugating enzyme 14 0.78 0.31 -0.32
36 AT4G02230 Ribosomal protein L19e family protein 0.77 0.3 -0.31
37 AT3G62940 Cysteine proteinases superfamily protein 0.77 0.33 -0.32
38 AT5G02450 Ribosomal protein L36e family protein 0.77 0.32 -0.32
39 AT4G21870 HSP20-like chaperones superfamily protein 0.77 0.29 -0.32
40 AT1G27310 nuclear transport factor 2A nuclear transport factor 2A 0.76 0.33 -0.32
41 AT4G35490 mitochondrial ribosomal protein L11 mitochondrial ribosomal protein
L11		 0.76 0.32 -0.33
42 AT5G06050 Putative methyltransferase family protein 0.76 0.32 -0.32
43 AT5G12270 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.76 0.32 -0.31
44 AT1G02310 Glycosyl hydrolase superfamily protein endo-beta-mannanase 1 -0.76 0.31 -0.3
45 AT1G23030 ARM repeat superfamily protein 0.76 0.32 -0.3
46 AT4G05400 copper ion binding 0.75 0.33 -0.32
47 AT1G67300 Major facilitator superfamily protein -0.75 0.32 -0.33
48 AT2G18400 ribosomal protein L6 family protein 0.75 0.32 -0.36
49 AT3G49910 Translation protein SH3-like family protein 0.75 0.32 -0.3
50 AT1G79610 Na+/H+ antiporter 6 ARABIDOPSIS NA+/H+ ANTIPORTER 6,
Na+/H+ antiporter 6		 -0.75 0.33 -0.32
51 AT1G02640 beta-xylosidase 2 BETA-XYLOSIDASE 2, beta-xylosidase
2		 0.75 0.32 -0.31
52 AT3G07270 GTP cyclohydrolase I 0.74 0.32 -0.32
53 AT1G18470 Transmembrane Fragile-X-F-associated protein -0.74 0.34 -0.3
54 AT5G11340 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.74 0.33 -0.32
55 AT4G29390 Ribosomal protein S30 family protein 0.74 0.33 -0.33
56 AT1G58360 amino acid permease 1 amino acid permease 1, NEUTRAL
AMINO ACID TRANSPORTER 2		 -0.74 0.29 -0.32
57 AT3G23880 F-box and associated interaction domains-containing protein 0.74 0.32 -0.31
58 AT4G32940 gamma vacuolar processing enzyme gamma vacuolar processing enzyme,
GAMMAVPE		 -0.74 0.3 -0.32
59 AT1G60470 galactinol synthase 4 galactinol synthase 4, galactinol
synthase 4		 -0.74 0.32 -0.33
60 AT3G08870 Concanavalin A-like lectin protein kinase family protein -0.73 0.34 -0.31
61 AT5G08380 alpha-galactosidase 1 alpha-galactosidase 1,
alpha-galactosidase 1		 -0.72 0.34 -0.3
62 AT1G31480 shoot gravitropism 2 (SGR2) SHOOT GRAVITROPISM 2 -0.71 0.33 -0.33
63 AT1G75410 BEL1-like homeodomain 3 BEL1-like homeodomain 3 -0.71 0.32 -0.31
64 AT4G32160 Phox (PX) domain-containing protein -0.71 0.33 -0.34
65 AT2G38465 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 11 growth stages; Has 16 Blast hits to 16 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.7 0.31 -0.32
66 AT1G51340 MATE efflux family protein -0.7 0.31 -0.31
67 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 -0.7 0.32 -0.32
68 AT3G47060 FTSH protease 7 FTSH protease 7 -0.69 0.33 -0.3
69 AT1G18870 isochorismate synthase 2 ARABIDOPSIS ISOCHORISMATE SYNTHASE
2, isochorismate synthase 2		 -0.69 0.32 -0.29
70 AT1G29395 COLD REGULATED 314 INNER MEMBRANE 1 COLD REGULATED 314 THYLAKOID
MEMBRANE 1, COLD REGULATED 314
INNER MEMBRANE 1, cold regulated
414 thylakoid membrane 1		 -0.69 0.31 -0.31
71 AT1G68570 Major facilitator superfamily protein -0.69 0.32 -0.32
72 AT2G47180 galactinol synthase 1 galactinol synthase 1, galactinol
synthase 1		 -0.69 0.34 -0.31
73 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.68 0.33 -0.32
74 AT3G05880 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2A -0.68 0.32 -0.34
75 AT1G64970 gamma-tocopherol methyltransferase gamma-tocopherol
methyltransferase, TMT1, VITAMIN E
DEFICIENT 4		 -0.68 0.3 -0.32
76 AT1G67310 Calmodulin-binding transcription activator protein with
CG-1 and Ankyrin domains		 -0.68 0.29 -0.3
77 AT5G48380 BAK1-interacting receptor-like kinase 1 BAK1-interacting receptor-like
kinase 1		 -0.68 0.31 -0.34
78 AT3G08020 PHD finger family protein -0.68 0.29 -0.3
79 AT3G53980 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.68 0.34 -0.31
80 AT1G26450 Carbohydrate-binding X8 domain superfamily protein -0.66 0.34 -0.32
81 AT1G68710 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.66 0.31 -0.33
82 AT5G50800 Nodulin MtN3 family protein AtSWEET13, SWEET13 -0.66 0.33 -0.33
83 AT4G02630 Protein kinase superfamily protein -0.66 0.31 -0.33
84 AT5G02620 ankyrin-like1 ankyrin-like1, ATANK1 -0.66 0.33 -0.32
85 AT4G19040 ENHANCED DISEASE RESISTANCE 2 ENHANCED DISEASE RESISTANCE 2 -0.65 0.33 -0.32
86 AT5G12930 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.65 0.31 -0.31
87 AT1G57630 Toll-Interleukin-Resistance (TIR) domain family protein -0.65 0.3 -0.33
88 AT2G43500 Plant regulator RWP-RK family protein -0.65 0.31 -0.34
89 AT1G75030 thaumatin-like protein 3 thaumatin-like protein 3,
thaumatin-like protein 3		 -0.65 0.31 -0.31
90 AT3G21670 Major facilitator superfamily protein -0.65 0.32 -0.32
91 AT5G58670 phospholipase C1 ARABIDOPSIS THALIANA PHOSPHOLIPASE
C, phospholipase C1, phospholipase
C 1, phospholipase C1		 -0.65 0.3 -0.32
92 AT1G61660 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.64 0.32 -0.32
93 AT1G33813 transposable element gene -0.64 0.29 -0.32
94 AT4G18880 heat shock transcription factor A4A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A4A, heat
shock transcription factor A4A		 -0.64 0.32 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0225 Raffinose D-(+)-Raffinose Raffinose ajugose biosynthesis II (galactinol-independent),
stachyose biosynthesis,
stachyose degradation 		-0.81 0.45 -0.48 C0225
96 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.68 0.45 -0.43 C0107