AT3G05490 : ralf-like 22
Query Information
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AGICode AT3G05490
Description ralf-like 22
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G05490 ralf-like 22 ralf-like 22 1 0.33 -0.31
2 AT1G65940 pseudogene, similar to Dof zinc finger protein, blastp
match of 61% identity and 1.7e-10 P-value to
GP|4996646|dbj|BAA78575.1||AB028132 Dof zinc finger protein
{Oryza sativa}		 0.75 0.33 -0.31
3 AT3G15710 Peptidase S24/S26A/S26B/S26C family protein 0.74 0.32 -0.32
4 AT4G00300 fringe-related protein 0.73 0.34 -0.33
5 AT1G16010 magnesium transporter 2 AtMGT2, AtMRS2-1, magnesium
transporter 2, MRS2-1		 -0.73 0.32 -0.31
6 AT3G33530 Transducin family protein / WD-40 repeat family protein -0.73 0.3 -0.3
7 AT1G09420 glucose-6-phosphate dehydrogenase 4 glucose-6-phosphate dehydrogenase
4		 -0.72 0.31 -0.3
8 AT4G02170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.33 -0.31
9 AT5G10880 tRNA synthetase-related / tRNA ligase-related -0.71 0.31 -0.32
10 AT1G17890 NAD(P)-binding Rossmann-fold superfamily protein GER2 0.71 0.32 -0.32
11 AT1G53530 Peptidase S24/S26A/S26B/S26C family protein 0.7 0.33 -0.32
12 AT5G11000 Plant protein of unknown function (DUF868) 0.7 0.32 -0.31
13 AT1G23540 Protein kinase superfamily protein proline-rich extensin like
receptor kinase, INFLORESCENCE
GROWTH INHIBITOR 1, proline-rich
extensin-like receptor kinase 12		 0.7 0.3 -0.32
14 AT2G35910 RING/U-box superfamily protein 0.7 0.31 -0.34
15 AT5G25340 Ubiquitin-like superfamily protein 0.69 0.29 -0.33
16 AT1G22870 Protein kinase family protein with ARM repeat domain -0.69 0.32 -0.32
17 AT3G55730 myb domain protein 109 myb domain protein 109, myb domain
protein 109		 0.69 0.32 -0.33
18 AT5G16470 zinc finger (C2H2 type) family protein 0.69 0.31 -0.32
19 AT5G03320 Protein kinase superfamily protein 0.69 0.3 -0.32
20 AT1G11130 Leucine-rich repeat protein kinase family protein SCRAMBLED, STRUBBELIG-RECEPTOR
FAMILY 9, STRUBBELIG		 -0.69 0.3 -0.31
21 AT5G44730 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.69 0.32 -0.34
22 AT3G56800 calmodulin 3 CALMODULIN 3, calmodulin 3 0.68 0.31 -0.32
23 AT5G04390 C2H2-type zinc finger family protein 0.68 0.33 -0.32
24 AT1G44050 Cysteine/Histidine-rich C1 domain family protein 0.68 0.31 -0.3
25 AT2G23860 pseudogene, similar to VAP27, blastp match of 56% identity
and 1.3e-25 P-value to GP|6688926|emb|CAB65313.1||AJ251365
VAP27 {Nicotiana plumbaginifolia}		 -0.68 0.33 -0.32
26 AT3G03240 alpha/beta-Hydrolases superfamily protein -0.68 0.32 -0.31
27 AT4G21550 VP1/ABI3-like 3 VP1/ABI3-like 3 -0.67 0.3 -0.33
28 AT1G70920 homeobox-leucine zipper protein 18 homeobox-leucine zipper protein
18, homeobox-leucine zipper
protein 18		 0.67 0.31 -0.32
29 AT5G10040 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65207.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.67 0.32 -0.3
30 AT3G05750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G26910.1); Has 2317
Blast hits to 1467 proteins in 247 species: Archae - 4;
Bacteria - 750; Metazoa - 557; Fungi - 182; Plants - 180;
Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).		 -0.67 0.34 -0.34
31 AT2G45010 PLAC8 family protein 0.67 0.34 -0.32
32 AT1G11130 Leucine-rich repeat protein kinase family protein SCRAMBLED, STRUBBELIG-RECEPTOR
FAMILY 9, STRUBBELIG		 -0.67 0.28 -0.3
33 AT2G36670 Eukaryotic aspartyl protease family protein -0.67 0.31 -0.3
34 AT1G26960 homeobox protein 23 homeobox protein 23, homeobox
protein 23		 0.67 0.31 -0.32
35 AT1G19240 unknown protein; Has 24 Blast hits to 24 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.32 -0.3
36 AT5G62310 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 INCOMPLETE ROOT HAIR ELONGATION 0.66 0.33 -0.32
37 AT4G18500 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.66 0.3 -0.33
38 AT4G19680 iron regulated transporter 2 IRON REGULATED TRANSPORTER 2, iron
regulated transporter 2		 0.66 0.31 -0.33
39 AT5G62740 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 ATHIR1, AtHIR4,
HYPERSENSITIVE-INDUCED RESPONSE
PROTEIN 1, hypersensitive induced
reaction 4		 0.66 0.31 -0.31
40 AT1G34480 Cysteine/Histidine-rich C1 domain family protein -0.66 0.31 -0.32
41 AT1G55940 cytochrome P450, family 708, subfamily A, polypeptide 1 cytochrome P450, family 708,
subfamily A, polypeptide 1		 -0.66 0.31 -0.3
42 AT4G32270 Ubiquitin-like superfamily protein -0.66 0.31 -0.29
43 AT1G20270 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.66 0.33 -0.31
44 AT1G21300 transposable element gene 0.66 0.32 -0.31
45 AT5G43800 transposable element gene -0.66 0.33 -0.33
46 AT2G10020 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.66 0.32 -0.31
47 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.65 0.33 -0.29
48 AT1G34330 pseudogene, putative peroxidase, similar to anionic
peroxidase GI:559235 from (Petroselinum crispum); blastp
match of 35% identity and 2.3e-53 P-value to
GP|21426121|gb|AAM52318.1|AC105363_7|AC105363 Putative
peroxidase {Oryza sativa (japonica cultivar-group)}		 0.65 0.34 -0.32
49 AT5G60630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; BEST Arabidopsis thaliana protein
match is: hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.65 0.3 -0.34
50 AT5G44030 cellulose synthase A4 cellulose synthase A4, IRREGULAR
XYLEM 5, NWS2		 -0.65 0.29 -0.3
51 AT4G04970 glucan synthase-like 1 GLUCAN SYNTHASE LIKE 1, GLUCAN
SYNTHASE LIKE-1, GSL01, glucan
synthase-like 1		 -0.65 0.33 -0.3
52 AT4G07430 transposable element gene 0.65 0.31 -0.31
53 AT3G19680 Protein of unknown function (DUF1005) 0.65 0.33 -0.3
54 AT4G39675 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.65 0.3 -0.3
55 AT5G40640 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
19 plant structures; EXPRESSED DURING: 7 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G27390.1); Has 104 Blast hits to 102 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi -
0; Plants - 101; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.64 0.32 -0.31
56 AT3G12720 myb domain protein 67 myb domain protein 67, ATY53,
MYB67, myb domain protein 67		 -0.64 0.3 -0.32
57 AT4G01700 Chitinase family protein 0.64 0.32 -0.31
58 AT1G50040 Protein of unknown function (DUF1005) 0.64 0.32 -0.29
59 AT1G35183 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.35 -0.33
60 AT2G04410 RPM1-interacting protein 4 (RIN4) family protein 0.64 0.29 -0.33
61 AT4G33070 Thiamine pyrophosphate dependent pyruvate decarboxylase
family protein		 0.64 0.31 -0.31
62 AT3G24310 myb domain protein 305 MYB DOMAIN PROTEIN 71, myb domain
protein 305		 -0.64 0.32 -0.31
63 AT5G04380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.64 0.33 -0.32
64 AT3G59100 glucan synthase-like 11 glucan synthase-like 11, gsl11,
glucan synthase-like 11		 -0.64 0.32 -0.33
65 AT2G45340 Leucine-rich repeat protein kinase family protein -0.64 0.33 -0.32
66 AT5G53660 growth-regulating factor 7 growth-regulating factor 7,
growth-regulating factor 7		 -0.63 0.34 -0.31
67 AT2G36320 A20/AN1-like zinc finger family protein 0.63 0.32 -0.31
68 AT2G13150 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.63 0.3 -0.34
69 AT4G33720 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.63 0.3 -0.3
70 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 -0.63 0.29 -0.34
71 AT1G18570 myb domain protein 51 myb domain protein 51, BW51A,
BW51B, HIGH INDOLIC GLUCOSINOLATE
1, myb domain protein 51		 0.63 0.3 -0.33
72 AT1G42710 General transcription factor 2-related zinc finger protein -0.63 0.31 -0.3
73 AT3G20620 F-box family protein-related -0.63 0.32 -0.31
74 AT1G50250 FTSH protease 1 FTSH protease 1 -0.63 0.29 -0.29
75 AT1G68710 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.63 0.3 -0.32
76 AT1G62980 expansin A18 ATEXP18, expansin A18, ATHEXP
ALPHA 1.25, EXPANSIN 18, expansin
A18		 0.63 0.33 -0.32
77 AT4G17430 O-fucosyltransferase family protein 0.63 0.31 -0.31
78 AT1G45160 Protein kinase superfamily protein -0.63 0.31 -0.35
79 AT5G08210 MIR834a; miRNA microRNA834A -0.63 0.32 -0.3
80 AT3G49950 GRAS family transcription factor -0.63 0.33 -0.32
81 AT2G26410 IQ-domain 4 IQ-domain 4 0.63 0.28 -0.3
82 AT5G18830 squamosa promoter binding protein-like 7 SQUAMOSA PROMOTER BINDING
PROTEIN-LIKE 7, squamosa promoter
binding protein-like 7		 -0.63 0.31 -0.32
83 AT4G20450 Leucine-rich repeat protein kinase family protein 0.62 0.32 -0.32
84 AT1G21430 Flavin-binding monooxygenase family protein YUC11 -0.62 0.32 -0.31
85 AT4G26460 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.62 0.33 -0.3
86 AT5G58850 myb domain protein 119 MYB DOMAIN PROTEIN 119, myb domain
protein 119		 0.62 0.31 -0.34
87 AT1G18940 Nodulin-like / Major Facilitator Superfamily protein 0.62 0.34 -0.32
88 AT2G24840 AGAMOUS-like 61 AGAMOUS-like 61, DIANA 0.62 0.29 -0.32
89 AT4G02270 root hair specific 13 root hair specific 13 0.62 0.32 -0.29
90 AT1G76210 Arabidopsis protein of unknown function (DUF241) 0.62 0.35 -0.33
91 AT4G20060 ARM repeat superfamily protein EMBRYO DEFECTIVE 1895 -0.62 0.29 -0.32
92 AT5G02690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 9 growth stages; Has 2 Blast hits to 2
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.62 0.31 -0.3
93 AT3G54280 DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA binding;helicases		 ATBTAF1, BTAF1, CHA16, CHR16, ROOT
GROWTH DEFECTIVE 3		 -0.62 0.31 -0.32
94 AT1G69190 Dihydropterin pyrophosphokinase / Dihydropteroate synthase -0.62 0.33 -0.32
95 AT5G07890 myosin heavy chain-related -0.62 0.31 -0.32
96 AT1G70620 cyclin-related -0.62 0.31 -0.32
97 AT3G49300 proline-rich family protein -0.62 0.3 -0.34
98 AT1G07990 SIT4 phosphatase-associated family protein -0.61 0.31 -0.33
99 AT3G42460 transposable element gene -0.61 0.31 -0.3
100 AT1G10610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.61 0.33 -0.32
101 AT5G46400 Tetratricopeptide repeat (TPR)-like superfamily protein AT PRP39-2, PRP39-2 -0.61 0.32 -0.31
102 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 -0.61 0.34 -0.29
103 AT5G40260 Nodulin MtN3 family protein AtSWEET8, SWEET8 -0.61 0.29 -0.34
104 AT1G58250 Golgi-body localisation protein domain ;RNA pol II promoter
Fmp27 protein domain		 SABRE -0.61 0.3 -0.32
105 AT3G04200 RmlC-like cupins superfamily protein -0.61 0.3 -0.31
106 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 -0.61 0.31 -0.31
107 AT3G20020 protein arginine methyltransferase 6 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 6,
protein arginine methyltransferase
6		 -0.6 0.34 -0.29
108 AT1G63960 Copper transport protein family -0.6 0.32 -0.32
109 AT1G10320 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.6 0.31 -0.32
110 AT5G16270 sister chromatid cohesion 1 protein 4 ARABIDOPSIS HOMOLOG OF RAD21 3,
sister chromatid cohesion 1
protein 4		 -0.6 0.34 -0.32
111 AT4G28760 Protein of unknown function (DUF3741) -0.59 0.3 -0.31
112 AT5G52460 FBD, F-box and Leucine Rich Repeat domains containing
protein		 embryo sac development arrest 41 -0.59 0.32 -0.31
113 AT1G15750 Transducin family protein / WD-40 repeat family protein TOPLESS, WUS-INTERACTING PROTEIN 1 -0.59 0.31 -0.33
114 AT2G44990 carotenoid cleavage dioxygenase 7 ATCCD7, carotenoid cleavage
dioxygenase 7, MAX3		 -0.59 0.31 -0.31
115 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.59 0.29 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
116 C0225 Raffinose D-(+)-Raffinose Raffinose ajugose biosynthesis II (galactinol-independent),
stachyose biosynthesis,
stachyose degradation 		-0.76 0.45 -0.45 C0225