AT3G05390 : -
Query Information
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AGICode AT3G05390
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G01240.1); Has 507 Blast hits to 498 proteins in 33 species: Archae - 4; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G05390 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF248, methyltransferase putative
(InterPro:IPR004159); BEST Arabidopsis thaliana protein
match is: S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein (TAIR:AT4G01240.1);
Has 507 Blast hits to 498 proteins in 33 species: Archae -
4; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 493;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		 1 0.32 -0.3
2 AT4G15330 cytochrome P450, family 705, subfamily A, polypeptide 1 cytochrome P450, family 705,
subfamily A, polypeptide 1		 0.8 0.3 -0.32
3 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins
in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa -
70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other
Eukaryotes - 33775 (source: NCBI BLink).		 TGN-localized SYP41 interacting
protein		 0.75 0.32 -0.32
4 AT5G09370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.75 0.34 -0.31
5 AT1G17720 Protein phosphatase 2A, regulatory subunit PR55 ATB BETA 0.74 0.31 -0.31
6 AT4G37470 alpha/beta-Hydrolases superfamily protein -0.74 0.32 -0.29
7 AT1G03410 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 2A6 0.73 0.29 -0.32
8 AT5G59590 UDP-glucosyl transferase 76E2 UDP-glucosyl transferase 76E2 0.73 0.32 -0.3
9 AT3G58690 Protein kinase superfamily protein -0.73 0.32 -0.32
10 AT5G15730 Protein kinase superfamily protein AtCRLK2,
calcium/calmodulin-regulated
receptor-like kinase 2		 0.72 0.3 -0.32
11 AT4G19370 Protein of unknown function (DUF1218) 0.72 0.31 -0.3
12 AT4G15270 glucosyltransferase-related 0.72 0.32 -0.31
13 AT5G22550 Plant protein of unknown function (DUF247) 0.71 0.32 -0.32
14 AT2G16970 Major facilitator superfamily protein maternal effect embryo arrest 15 0.71 0.3 -0.31
15 AT2G38650 galacturonosyltransferase 7 galacturonosyltransferase 7, LIKE
GLYCOSYL TRANSFERASE 7		 0.71 0.31 -0.3
16 AT1G10050 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 0.71 0.33 -0.32
17 AT1G52420 UDP-Glycosyltransferase superfamily protein 0.71 0.31 -0.31
18 AT4G36105 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G17990.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.71 0.31 -0.31
19 AT4G18890 BES1/BZR1 homolog 3 BES1/BZR1 homolog 3 0.7 0.31 -0.34
20 AT3G60760 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.7 0.32 -0.29
21 AT5G64690 neurofilament triplet H protein-related 0.7 0.29 -0.29
22 AT4G15340 pentacyclic triterpene synthase 1 04C11, pentacyclic triterpene
synthase 1, pentacyclic triterpene
synthase 1		 0.7 0.3 -0.3
23 AT5G46340 O-acetyltransferase family protein REDUCED WALL ACETYLATION 1 0.7 0.3 -0.33
24 AT5G11850 Protein kinase superfamily protein 0.69 0.33 -0.31
25 AT3G11460 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.31 -0.32
26 AT1G24330 ARM repeat superfamily protein 0.69 0.29 -0.31
27 AT5G42590 cytochrome P450, family 71, subfamily A, polypeptide 16 cytochrome P450, family 71,
subfamily A, polypeptide 16,
marneral oxidase		 0.69 0.35 -0.3
28 AT3G18350 Plant protein of unknown function (DUF639) 0.69 0.33 -0.31
29 AT2G19110 heavy metal atpase 4 ARABIDOPSIS HEAVY METAL ATPASE 4,
heavy metal atpase 4		 0.69 0.32 -0.33
30 AT1G16370 organic cation/carnitine transporter 6 ARABIDOPSIS THALIANA ORGANIC
CATION/CARNITINE TRANSPORTER 6,
organic cation/carnitine
transporter 6		 0.69 0.3 -0.32
31 AT2G30590 WRKY DNA-binding protein 21 WRKY DNA-binding protein 21 -0.69 0.33 -0.31
32 AT2G22760 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.69 0.31 -0.31
33 AT4G13020 Protein kinase superfamily protein MHK 0.69 0.32 -0.3
34 AT1G12470 zinc ion binding 0.68 0.34 -0.32
35 AT4G13640 Homeodomain-like superfamily protein unfertilized embryo sac 16 -0.68 0.3 -0.3
36 AT1G11260 sugar transporter 1 SUGAR TRANSPORTER 1, sugar
transporter 1		 -0.68 0.31 -0.31
37 AT5G15020 SIN3-like 2 SIN3-like 2 0.68 0.29 -0.3
38 AT4G20235 cytochrome P450, family 71, subfamily A, polypeptide 28 cytochrome P450, family 71,
subfamily A, polypeptide 28		 0.68 0.3 -0.33
39 AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein 0.68 0.3 -0.35
40 AT5G35760 Beta-galactosidase related protein -0.67 0.31 -0.33
41 AT2G06700 transposable element gene 0.67 0.31 -0.33
42 AT4G08180 OSBP(oxysterol binding protein)-related protein 1C OSBP(oxysterol binding
protein)-related protein 1C		 0.67 0.33 -0.32
43 AT2G02130 low-molecular-weight cysteine-rich 68 low-molecular-weight cysteine-rich
68, PDF2.3		 -0.67 0.3 -0.32
44 AT2G43160 ENTH/VHS family protein 0.67 0.33 -0.3
45 AT3G44460 Basic-leucine zipper (bZIP) transcription factor family
protein		 basic leucine zipper transcription
factor 67, DPBF2		 0.67 0.33 -0.31
46 AT1G31910 GHMP kinase family protein 0.67 0.31 -0.34
47 AT2G39380 exocyst subunit exo70 family protein H2 exocyst subunit exo70 family
protein H2, exocyst subunit exo70
family protein H2		 0.67 0.29 -0.31
48 AT5G08580 Calcium-binding EF hand family protein -0.67 0.33 -0.32
49 AT1G13540 Protein of unknown function (DUF1262) -0.67 0.33 -0.31
50 AT1G43900 Protein phosphatase 2C family protein 0.67 0.34 -0.32
51 AT1G32850 ubiquitin-specific protease 11 ubiquitin-specific protease 11 0.67 0.31 -0.31
52 AT1G54410 dehydrin family protein -0.67 0.31 -0.31
53 AT5G45200 Disease resistance protein (TIR-NBS-LRR class) family 0.67 0.3 -0.31
54 AT3G16730 CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex,
subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to
211 proteins in 82 species: Archae - 0; Bacteria - 0;
Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 hypersensitive to excess boron 2 -0.67 0.3 -0.3
55 AT2G34500 cytochrome P450, family 710, subfamily A, polypeptide 1 cytochrome P450, family 710,
subfamily A, polypeptide 1		 0.67 0.3 -0.32
56 AT5G13560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast
hits to 8846 proteins in 811 species: Archae - 217;
Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants -
528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI
BLink).		 0.66 0.32 -0.31
57 AT1G67370 DNA-binding HORMA family protein ASYNAPTIC 1, ATASY1 -0.66 0.31 -0.3
58 AT5G35700 fimbrin-like protein 2 fimbrin-like protein 2, FIMBRIN5 0.66 0.32 -0.3
59 AT3G05960 sugar transporter 6 SUGAR TRANSPORTER 6, sugar
transporter 6		 0.66 0.29 -0.33
60 AT4G34310 alpha/beta-Hydrolases superfamily protein 0.66 0.31 -0.3
61 AT5G25520 SPOC domain / Transcription elongation factor S-II protein 0.66 0.32 -0.31
62 AT3G26614 transposable element gene 0.66 0.32 -0.31
63 AT2G07360 SH3 domain-containing protein 0.66 0.31 -0.32
64 AT5G04120 Phosphoglycerate mutase family protein 0.66 0.3 -0.35
65 AT2G17230 EXORDIUM like 5 EXORDIUM like 5 -0.66 0.33 -0.3
66 AT3G13130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte; Has
140 Blast hits to 132 proteins in 41 species: Archae - 2;
Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51;
Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).		 -0.66 0.3 -0.31
67 AT5G23840 MD-2-related lipid recognition domain-containing protein 0.66 0.29 -0.3
68 AT3G58280 Arabidopsis phospholipase-like protein (PEARLI 4) with
TRAF-like domain		 0.65 0.3 -0.31
69 AT4G33130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 6 growth stages; BEST Arabidopsis thaliana protein
match is: Protein of unknown function, DUF547
(TAIR:AT1G16750.1); Has 192 Blast hits to 192 proteins in
18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
0; Plants - 189; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.65 0.31 -0.33
70 AT1G30990 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.65 0.32 -0.34
71 AT3G03510 Phototropic-responsive NPH3 family protein 0.65 0.3 -0.33
72 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 -0.65 0.33 -0.31
73 AT1G58410 Disease resistance protein (CC-NBS-LRR class) family 0.65 0.31 -0.33
74 AT2G35550 basic pentacysteine 7 BASIC PENTACYSTEINE 7, BBR, basic
pentacysteine 7		 0.65 0.32 -0.3
75 AT1G14720 xyloglucan endotransglucosylase/hydrolase 28 ATXTH28, ENDOXYLOGLUCAN
TRANSFERASE A2, xyloglucan
endotransglucosylase/hydrolase 28,
xyloglucan endotransglycosylase
related 2		 -0.65 0.33 -0.32
76 AT5G63850 amino acid permease 4 amino acid permease 4 0.65 0.33 -0.31
77 AT2G30830 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.65 0.32 -0.31
78 AT4G35170 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.64 0.33 -0.31
79 AT1G49870 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, E expanded
cotyledon stage, D bilateral stage; Has 6518 Blast hits to
5022 proteins in 522 species: Archae - 49; Bacteria - 635;
Metazoa - 3264; Fungi - 379; Plants - 242; Viruses - 9;
Other Eukaryotes - 1940 (source: NCBI BLink).		 -0.64 0.31 -0.34
80 AT4G16850 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G31130.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.64 0.33 -0.32
81 AT1G70300 K+ uptake permease 6 K+ uptake permease 6 0.64 0.33 -0.31
82 AT1G29860 WRKY DNA-binding protein 71 WRKY DNA-BINDING PROTEIN 71, WRKY
DNA-binding protein 71		 -0.64 0.3 -0.3
83 AT4G09630 Protein of unknown function (DUF616) 0.64 0.32 -0.35
84 AT1G08970 nuclear factor Y, subunit C9 HEME ACTIVATED PROTEIN 5C, nuclear
factor Y, subunit C9		 -0.64 0.31 -0.3
85 AT3G14570 glucan synthase-like 4 glucan synthase-like 4, atgsl4,
gsl04, glucan synthase-like 4		 0.64 0.33 -0.31
86 AT2G30620 winged-helix DNA-binding transcription factor family
protein		 -0.63 0.32 -0.31
87 AT2G44150 histone-lysine N-methyltransferase ASHH3 histone-lysine N-methyltransferase
ASHH3, SET DOMAIN-CONTAINING
PROTEIN 7		 -0.63 0.31 -0.31
88 AT4G37710 VQ motif-containing protein 0.63 0.32 -0.31
89 AT3G45810 ferric reductase-like transmembrane component family
protein		 0.63 0.31 -0.32
90 AT2G32850 Protein kinase superfamily protein 0.63 0.32 -0.3
91 AT5G58003 C-terminal domain phosphatase-like 4 C-terminal domain phosphatase-like
4		 -0.63 0.31 -0.32
92 AT1G49250 ATP-dependent DNA ligase 0.63 0.32 -0.31
93 AT4G38680 glycine rich protein 2 ARABIDOPSIS THALIANA COLD SHOCK
PROTEIN 2, COLD SHOCK DOMAIN
PROTEIN 2, COLD SHOCK PROTEIN 2,
glycine rich protein 2		 -0.63 0.31 -0.3
94 AT1G03280 Transcription factor TFIIE, alpha subunit 0.63 0.31 -0.31
95 AT5G13790 AGAMOUS-like 15 AGAMOUS-like 15 -0.63 0.31 -0.3
96 AT5G43550 F-box associated ubiquitination effector family protein 0.63 0.31 -0.3
97 AT2G02515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: central cell, embryo;
EXPRESSED DURING: C globular stage; Has 18 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.63 0.31 -0.33
98 AT3G62230 F-box family protein DUO1-activated F-box 1 -0.62 0.31 -0.34
99 AT3G29190 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.62 0.32 -0.31
100 AT5G24240 Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family
protein		 -0.62 0.32 -0.31
101 AT2G21140 proline-rich protein 2 proline-rich protein 2,
proline-rich protein 2		 -0.62 0.31 -0.32
102 AT2G45660 AGAMOUS-like 20 AGAMOUS-like 20, SUPPRESSOR OF
OVEREXPRESSION OF CO 1, SUPPRESSOR
OF OVEREXPRESSION OF CO 1		 -0.62 0.31 -0.3
103 AT3G57990 unknown protein; Has 1497 Blast hits to 1323 proteins in 52
species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi -
34; Plants - 61; Viruses - 0; Other Eukaryotes - 1375
(source: NCBI BLink).		 -0.61 0.3 -0.33
104 AT3G24260 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting
(InterPro:IPR013194); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G28870.1); Has 220 Blast
hits to 218 proteins in 65 species: Archae - 7; Bacteria -
6; Metazoa - 43; Fungi - 2; Plants - 115; Viruses - 0;
Other Eukaryotes - 47 (source: NCBI BLink).		 -0.61 0.32 -0.3
105 AT3G16570 rapid alkalinization factor 23 ARABIDOPSIS RAPID ALKALINIZATION
FACTOR 23, rapid alkalinization
factor 23		 -0.61 0.32 -0.31
106 AT5G06190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58540.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.61 0.33 -0.32
107 AT1G05070 Protein of unknown function (DUF1068) -0.61 0.32 -0.31
108 AT4G34500 Protein kinase superfamily protein -0.6 0.3 -0.3
109 AT1G23350 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.6 0.32 -0.31
110 AT3G22190 IQ-domain 5 IQ-domain 5 -0.6 0.31 -0.3
111 AT1G04020 breast cancer associated RING 1 ATBARD1, breast cancer associated
RING 1, ROW1		 -0.6 0.32 -0.33
112 AT3G21660 UBX domain-containing protein -0.6 0.33 -0.33
113 AT1G01470 Late embryogenesis abundant protein LATE EMBRYOGENESIS ABUNDANT 14,
LIGHT STRESS-REGULATED 3		 -0.6 0.32 -0.3
114 AT2G43620 Chitinase family protein -0.6 0.31 -0.31
115 AT2G36010 E2F transcription factor 3 ATE2FA, E2F transcription factor 3 -0.6 0.3 -0.33
116 AT3G51880 high mobility group B1 AtHMGB1, high mobility group B1,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D1		 -0.6 0.31 -0.34
117 AT2G43270 F-box and associated interaction domains-containing protein -0.6 0.3 -0.33
118 AT1G08630 threonine aldolase 1 threonine aldolase 1 -0.6 0.33 -0.3
119 AT5G57260 cytochrome P450, family 71, subfamily B, polypeptide 10 cytochrome P450, family 71,
subfamily B, polypeptide 10		 -0.59 0.31 -0.32
120 AT2G33680 Tetratricopeptide repeat (TPR)-like superfamily protein -0.59 0.32 -0.31
121 AT1G19500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G35765.1); Has 9 Blast hits to 9 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.33 -0.32
122 AT5G59060 BEST Arabidopsis thaliana protein match is: RNA-directed
DNA polymerase (reverse transcriptase)-related family
protein (TAIR:AT5G18880.1); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.59 0.29 -0.33
123 AT2G27970 CDK-subunit 2 CDK-subunit 2 -0.59 0.31 -0.32
124 AT5G11150 vesicle-associated membrane protein 713 vesicle-associated membrane
protein 713, VAMP713,
vesicle-associated membrane
protein 713		 -0.59 0.31 -0.32
125 AT3G30240 transposable element gene -0.58 0.33 -0.33
126 AT4G24240 WRKY DNA-binding protein 7 ATWRKY7, WRKY DNA-binding protein
7		 -0.58 0.31 -0.31
127 AT5G49050 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to stress; LOCATED IN: cellular_component unknown;
CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016),
Rossmann-like alpha/beta/alpha sandwich fold
(InterPro:IPR014729); BEST Arabidopsis thaliana protein
match is: Adenine nucleotide alpha hydrolases-like
superfamily protein (TAIR:AT2G47710.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.58 0.32 -0.31