AGICode | AT3G10230 |
Description | lycopene cyclase |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G10230 | lycopene cyclase | AtLCY, lycopene cyclase | 1 | 0.3 | -0.32 | ||
2 | AT2G28800 | 63 kDa inner membrane family protein | ALBINO 3 | 0.88 | 0.32 | -0.32 | ||
3 | AT1G32200 | phospholipid/glycerol acyltransferase family protein | ACYLTRANSFERASE 1, ATS1 | 0.86 | 0.28 | -0.33 | ||
4 | AT1G16080 | unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). |
0.85 | 0.31 | -0.34 | |||
5 | AT5G57960 | GTP-binding protein, HflX | 0.85 | 0.32 | -0.31 | |||
6 | AT1G32160 | Protein of unknown function (DUF760) | 0.84 | 0.31 | -0.32 | |||
7 | AT2G21280 | NAD(P)-binding Rossmann-fold superfamily protein | ATSULA, GIANT CHLOROPLAST 1, SULA | 0.84 | 0.31 | -0.33 | ||
8 | AT2G47590 | photolyase/blue-light receptor 2 | photolyase/blue-light receptor 2 | 0.84 | 0.32 | -0.31 | ||
9 | AT5G08650 | Small GTP-binding protein | 0.84 | 0.31 | -0.32 | |||
10 | AT2G31400 | genomes uncoupled 1 | genomes uncoupled 1 | 0.83 | 0.31 | -0.33 | ||
11 | AT2G35410 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.83 | 0.32 | -0.3 | |||
12 | AT5G47840 | adenosine monophosphate kinase | adenosine monophosphate kinase | 0.83 | 0.3 | -0.32 | ||
13 | AT1G51110 | Plastid-lipid associated protein PAP / fibrillin family protein |
0.83 | 0.3 | -0.32 | |||
14 | AT2G41680 | NADPH-dependent thioredoxin reductase C | NADPH-dependent thioredoxin reductase C |
0.82 | 0.32 | -0.32 | ||
15 | AT5G59250 | Major facilitator superfamily protein | 0.82 | 0.31 | -0.34 | |||
16 | AT5G28750 | Bacterial sec-independent translocation protein mttA/Hcf106 | 0.82 | 0.31 | -0.31 | |||
17 | AT4G35250 | NAD(P)-binding Rossmann-fold superfamily protein | 0.82 | 0.3 | -0.3 | |||
18 | AT2G34860 | DnaJ/Hsp40 cysteine-rich domain superfamily protein | embryo sac development arrest 3 | 0.82 | 0.31 | -0.3 | ||
19 | AT1G51110 | Plastid-lipid associated protein PAP / fibrillin family protein |
0.82 | 0.31 | -0.32 | |||
20 | AT5G61410 | D-ribulose-5-phosphate-3-epimerase | EMBRYO DEFECTIVE 2728, D-ribulose-5-phosphate-3-epimerase |
0.82 | 0.33 | -0.31 | ||
21 | AT3G15900 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.81 | 0.32 | -0.31 | |||
22 | AT5G22620 | phosphoglycerate/bisphosphoglycerate mutase family protein | 0.81 | 0.31 | -0.32 | |||
23 | AT2G24270 | aldehyde dehydrogenase 11A3 | aldehyde dehydrogenase 11A3 | 0.81 | 0.31 | -0.32 | ||
24 | AT4G37930 | serine transhydroxymethyltransferase 1 | serine transhydroxymethyltransferase 1, SERINE HYDROXYMETHYLTRANSFERASE 1, SERINE TRANSHYDROXYMETHYLTRANSFERASE |
0.81 | 0.32 | -0.3 | ||
25 | AT1G80030 | Molecular chaperone Hsp40/DnaJ family protein | 0.81 | 0.3 | -0.32 | |||
26 | AT1G45474 | photosystem I light harvesting complex gene 5 | photosystem I light harvesting complex gene 5 |
0.81 | 0.3 | -0.3 | ||
27 | AT3G63490 | Ribosomal protein L1p/L10e family | EMBRYO DEFECTIVE 3126 | 0.81 | 0.32 | -0.31 | ||
28 | AT5G27560 | Domain of unknown function (DUF1995) | 0.81 | 0.32 | -0.3 | |||
29 | AT1G73060 | Low PSII Accumulation 3 | Low PSII Accumulation 3 | 0.8 | 0.3 | -0.3 | ||
30 | AT5G39830 | Trypsin family protein with PDZ domain | DEG8, DEG PROTEASE 8 | 0.8 | 0.32 | -0.3 | ||
31 | AT1G63610 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 537 Blast hits to 411 proteins in 100 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). |
0.8 | 0.34 | -0.31 | |||
32 | AT2G04700 | ferredoxin thioredoxin reductase catalytic beta chain family protein |
0.8 | 0.32 | -0.32 | |||
33 | AT5G23120 | photosystem II stability/assembly factor, chloroplast (HCF136) |
HIGH CHLOROPHYLL FLUORESCENCE 136 | 0.79 | 0.32 | -0.32 | ||
34 | AT4G01800 | Albino or Glassy Yellow 1 | Albino or Glassy Yellow 1, Arabidopsis thaliana chloroplast SecA, SECA1 |
0.79 | 0.32 | -0.31 | ||
35 | AT3G26060 | Thioredoxin superfamily protein | ATPRX Q, peroxiredoxin Q | 0.79 | 0.31 | -0.33 | ||
36 | AT5G20220 | zinc knuckle (CCHC-type) family protein | 0.79 | 0.29 | -0.31 | |||
37 | AT3G15520 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
0.79 | 0.3 | -0.33 | |||
38 | AT2G05620 | proton gradient regulation 5 | proton gradient regulation 5 | 0.78 | 0.32 | -0.33 | ||
39 | AT3G58140 | phenylalanyl-tRNA synthetase class IIc family protein | 0.78 | 0.29 | -0.32 | |||
40 | AT1G65260 | plastid transcriptionally active 4 | plastid transcriptionally active 4, VESICLE-INDUCING PROTEIN IN PLASTIDS 1 |
0.78 | 0.32 | -0.31 | ||
41 | AT1G31410 | putrescine-binding periplasmic protein-related | 0.78 | 0.31 | -0.3 | |||
42 | AT1G71500 | Rieske (2Fe-2S) domain-containing protein | 0.77 | 0.31 | -0.31 | |||
43 | AT5G48910 | Pentatricopeptide repeat (PPR) superfamily protein | LOW PSII ACCUMULATION 66 | 0.77 | 0.32 | -0.32 | ||
44 | AT1G25290 | RHOMBOID-like protein 10 | RHOMBOID-like protein 10, RHOMBOID-like protein 10 |
0.77 | 0.3 | -0.32 | ||
45 | AT4G28025 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.77 | 0.3 | -0.34 | |||
46 | AT1G07010 | Calcineurin-like metallo-phosphoesterase superfamily protein |
AtSLP1, Shewenella-like protein phosphatase 1 |
0.76 | 0.33 | -0.3 | ||
47 | AT1G43670 | Inositol monophosphatase family protein | Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, fructose-1,6-bisphosphatase, FRUCTOSE INSENSITIVE 1 |
0.76 | 0.32 | -0.31 | ||
48 | AT3G50790 | esterase/lipase/thioesterase family protein | 0.76 | 0.31 | -0.33 | |||
49 | AT2G01110 | Sec-independent periplasmic protein translocase | ALBINO AND PALE GREEN 2, PGA2, TWIN-ARGININE TRANSLOCATION C, unfertilized embryo sac 3 |
0.76 | 0.33 | -0.33 | ||
50 | AT5G01830 | ARM repeat superfamily protein | -0.69 | 0.33 | -0.34 | |||
51 | AT3G21710 | unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.31 | -0.32 | |||
52 | AT3G15300 | VQ motif-containing protein | -0.65 | 0.32 | -0.29 | |||
53 | AT1G44970 | Peroxidase superfamily protein | -0.63 | 0.32 | -0.31 | |||
54 | AT4G28410 | Tyrosine transaminase family protein | -0.63 | 0.32 | -0.34 | |||
55 | AT2G25980 | Mannose-binding lectin superfamily protein | -0.62 | 0.31 | -0.31 | |||
56 | AT5G47980 | HXXXD-type acyl-transferase family protein | -0.61 | 0.32 | -0.31 | |||
57 | AT2G47460 | myb domain protein 12 | MYB DOMAIN PROTEIN 12, myb domain protein 12, PRODUCTION OF FLAVONOL GLYCOSIDES 1 |
-0.61 | 0.33 | -0.31 | ||
58 | AT5G59305 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.61 | 0.34 | -0.28 | |||
59 | AT1G08320 | bZIP transcription factor family protein | bZIP21, TGACG (TGA) motif-binding protein 9 |
-0.61 | 0.3 | -0.32 | ||
60 | AT1G53830 | pectin methylesterase 2 | pectin methylesterase 2, pectin methylesterase 2 |
-0.57 | 0.31 | -0.3 | ||
61 | AT1G77640 | Integrase-type DNA-binding superfamily protein | -0.57 | 0.31 | -0.31 | |||
62 | AT3G20840 | Integrase-type DNA-binding superfamily protein | PLETHORA 1 | -0.56 | 0.32 | -0.32 | ||
63 | AT4G11880 | AGAMOUS-like 14 | AGAMOUS-like 14 | -0.56 | 0.33 | -0.31 | ||
64 | AT1G73160 | UDP-Glycosyltransferase superfamily protein | -0.55 | 0.31 | -0.32 | |||
65 | AT2G04800 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.31 | -0.36 |