AT3G10230 : AtLCY
Query Information
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AGICode AT3G10230
Description lycopene cyclase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G10230 lycopene cyclase AtLCY, lycopene cyclase 1 0.3 -0.32
2 AT2G28800 63 kDa inner membrane family protein ALBINO 3 0.88 0.32 -0.32
3 AT1G32200 phospholipid/glycerol acyltransferase family protein ACYLTRANSFERASE 1, ATS1 0.86 0.28 -0.33
4 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma,
chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; Has 81
Blast hits to 81 proteins in 28 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 17 (source: NCBI BLink).		 0.85 0.31 -0.34
5 AT5G57960 GTP-binding protein, HflX 0.85 0.32 -0.31
6 AT1G32160 Protein of unknown function (DUF760) 0.84 0.31 -0.32
7 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein ATSULA, GIANT CHLOROPLAST 1, SULA 0.84 0.31 -0.33
8 AT2G47590 photolyase/blue-light receptor 2 photolyase/blue-light receptor 2 0.84 0.32 -0.31
9 AT5G08650 Small GTP-binding protein 0.84 0.31 -0.32
10 AT2G31400 genomes uncoupled 1 genomes uncoupled 1 0.83 0.31 -0.33
11 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein 0.83 0.32 -0.3
12 AT5G47840 adenosine monophosphate kinase adenosine monophosphate kinase 0.83 0.3 -0.32
13 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.83 0.3 -0.32
14 AT2G41680 NADPH-dependent thioredoxin reductase C NADPH-dependent thioredoxin
reductase C		 0.82 0.32 -0.32
15 AT5G59250 Major facilitator superfamily protein 0.82 0.31 -0.34
16 AT5G28750 Bacterial sec-independent translocation protein mttA/Hcf106 0.82 0.31 -0.31
17 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.82 0.3 -0.3
18 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein embryo sac development arrest 3 0.82 0.31 -0.3
19 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.82 0.31 -0.32
20 AT5G61410 D-ribulose-5-phosphate-3-epimerase EMBRYO DEFECTIVE 2728,
D-ribulose-5-phosphate-3-epimerase		 0.82 0.33 -0.31
21 AT3G15900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.81 0.32 -0.31
22 AT5G22620 phosphoglycerate/bisphosphoglycerate mutase family protein 0.81 0.31 -0.32
23 AT2G24270 aldehyde dehydrogenase 11A3 aldehyde dehydrogenase 11A3 0.81 0.31 -0.32
24 AT4G37930 serine transhydroxymethyltransferase 1 serine
transhydroxymethyltransferase 1,
SERINE HYDROXYMETHYLTRANSFERASE 1,
SERINE
TRANSHYDROXYMETHYLTRANSFERASE		 0.81 0.32 -0.3
25 AT1G80030 Molecular chaperone Hsp40/DnaJ family protein 0.81 0.3 -0.32
26 AT1G45474 photosystem I light harvesting complex gene 5 photosystem I light harvesting
complex gene 5		 0.81 0.3 -0.3
27 AT3G63490 Ribosomal protein L1p/L10e family EMBRYO DEFECTIVE 3126 0.81 0.32 -0.31
28 AT5G27560 Domain of unknown function (DUF1995) 0.81 0.32 -0.3
29 AT1G73060 Low PSII Accumulation 3 Low PSII Accumulation 3 0.8 0.3 -0.3
30 AT5G39830 Trypsin family protein with PDZ domain DEG8, DEG PROTEASE 8 0.8 0.32 -0.3
31 AT1G63610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G14910.1); Has 537 Blast
hits to 411 proteins in 100 species: Archae - 0; Bacteria -
231; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0;
Other Eukaryotes - 212 (source: NCBI BLink).		 0.8 0.34 -0.31
32 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain
family protein		 0.8 0.32 -0.32
33 AT5G23120 photosystem II stability/assembly factor, chloroplast
(HCF136)		 HIGH CHLOROPHYLL FLUORESCENCE 136 0.79 0.32 -0.32
34 AT4G01800 Albino or Glassy Yellow 1 Albino or Glassy Yellow 1,
Arabidopsis thaliana chloroplast
SecA, SECA1		 0.79 0.32 -0.31
35 AT3G26060 Thioredoxin superfamily protein ATPRX Q, peroxiredoxin Q 0.79 0.31 -0.33
36 AT5G20220 zinc knuckle (CCHC-type) family protein 0.79 0.29 -0.31
37 AT3G15520 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.79 0.3 -0.33
38 AT2G05620 proton gradient regulation 5 proton gradient regulation 5 0.78 0.32 -0.33
39 AT3G58140 phenylalanyl-tRNA synthetase class IIc family protein 0.78 0.29 -0.32
40 AT1G65260 plastid transcriptionally active 4 plastid transcriptionally active
4, VESICLE-INDUCING PROTEIN IN
PLASTIDS 1		 0.78 0.32 -0.31
41 AT1G31410 putrescine-binding periplasmic protein-related 0.78 0.31 -0.3
42 AT1G71500 Rieske (2Fe-2S) domain-containing protein 0.77 0.31 -0.31
43 AT5G48910 Pentatricopeptide repeat (PPR) superfamily protein LOW PSII ACCUMULATION 66 0.77 0.32 -0.32
44 AT1G25290 RHOMBOID-like protein 10 RHOMBOID-like protein 10,
RHOMBOID-like protein 10		 0.77 0.3 -0.32
45 AT4G28025 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.77 0.3 -0.34
46 AT1G07010 Calcineurin-like metallo-phosphoesterase superfamily
protein		 AtSLP1, Shewenella-like protein
phosphatase 1		 0.76 0.33 -0.3
47 AT1G43670 Inositol monophosphatase family protein Arabidopsis thaliana cytosolic
fructose-1,6-bisphosphatase,
fructose-1,6-bisphosphatase,
FRUCTOSE INSENSITIVE 1		 0.76 0.32 -0.31
48 AT3G50790 esterase/lipase/thioesterase family protein 0.76 0.31 -0.33
49 AT2G01110 Sec-independent periplasmic protein translocase ALBINO AND PALE GREEN 2, PGA2,
TWIN-ARGININE TRANSLOCATION C,
unfertilized embryo sac 3		 0.76 0.33 -0.33
50 AT5G01830 ARM repeat superfamily protein -0.69 0.33 -0.34
51 AT3G21710 unknown protein; Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.31 -0.32
52 AT3G15300 VQ motif-containing protein -0.65 0.32 -0.29
53 AT1G44970 Peroxidase superfamily protein -0.63 0.32 -0.31
54 AT4G28410 Tyrosine transaminase family protein -0.63 0.32 -0.34
55 AT2G25980 Mannose-binding lectin superfamily protein -0.62 0.31 -0.31
56 AT5G47980 HXXXD-type acyl-transferase family protein -0.61 0.32 -0.31
57 AT2G47460 myb domain protein 12 MYB DOMAIN PROTEIN 12, myb domain
protein 12, PRODUCTION OF FLAVONOL
GLYCOSIDES 1		 -0.61 0.33 -0.31
58 AT5G59305 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.61 0.34 -0.28
59 AT1G08320 bZIP transcription factor family protein bZIP21, TGACG (TGA) motif-binding
protein 9		 -0.61 0.3 -0.32
60 AT1G53830 pectin methylesterase 2 pectin methylesterase 2, pectin
methylesterase 2		 -0.57 0.31 -0.3
61 AT1G77640 Integrase-type DNA-binding superfamily protein -0.57 0.31 -0.31
62 AT3G20840 Integrase-type DNA-binding superfamily protein PLETHORA 1 -0.56 0.32 -0.32
63 AT4G11880 AGAMOUS-like 14 AGAMOUS-like 14 -0.56 0.33 -0.31
64 AT1G73160 UDP-Glycosyltransferase superfamily protein -0.55 0.31 -0.32
65 AT2G04800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: hypocotyl, root;
Has 4 Blast hits to 4 proteins in 1 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.31 -0.36