AT3G10200 : -
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AGICode AT3G10200
Description S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G10200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
1 0.3 -0.3
2 AT5G26860 lon protease 1 lon protease 1, LON_ARA_ARA -0.81 0.32 -0.31
3 AT4G28240 Wound-responsive family protein 0.81 0.31 -0.32
4 AT3G07310 Protein of unknown function (DUF760) 0.8 0.32 -0.32
5 AT1G16740 Ribosomal protein L20 -0.77 0.32 -0.33
6 AT4G21650 Subtilase family protein 0.77 0.35 -0.29
7 AT3G06330 RING/U-box superfamily protein 0.77 0.32 -0.31
8 AT3G17950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).
0.77 0.32 -0.34
9 AT5G23840 MD-2-related lipid recognition domain-containing protein -0.77 0.32 -0.29
10 AT1G17140 interactor of constitutive active rops 1 interactor of constitutive active
rops 1, ROP INTERACTIVE PARTNER 1
0.76 0.31 -0.3
11 AT3G25655 inflorescence deficient in abscission (IDA)-like 1 inflorescence deficient in
abscission (IDA)-like 1
-0.76 0.33 -0.34
12 AT1G77210 sugar transporter 14 sugar transport protein 14, sugar
transport protein 14
0.76 0.3 -0.32
13 AT1G61370 S-locus lectin protein kinase family protein -0.76 0.32 -0.31
14 AT1G04810 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit
-0.75 0.31 -0.32
15 AT1G68650 Uncharacterized protein family (UPF0016) -0.75 0.29 -0.32
16 AT3G24530 AAA-type ATPase family protein / ankyrin repeat family
protein
-0.74 0.31 -0.32
17 AT2G41870 Remorin family protein 0.74 0.31 -0.31
18 AT1G79460 Terpenoid cyclases/Protein prenyltransferases superfamily
protein
ARABIDOPSIS THALIANA ENT-KAURENE
SYNTHASE, ARABIDOPSIS THALIANA
ENT-KAURENE SYNTHASE 1, GA
REQUIRING 2, KS, ENT-KAURENE
SYNTHASE 1
0.74 0.33 -0.31
19 AT3G22980 Ribosomal protein S5/Elongation factor G/III/V family
protein
-0.74 0.32 -0.3
20 AT2G02860 sucrose transporter 2 ARABIDOPSIS THALIANA SUCROSE
TRANSPORTER 3, ATSUT2, SUCROSE
TRANSPORTER 3, sucrose transporter
2
-0.73 0.32 -0.3
21 AT3G10050 L-O-methylthreonine resistant 1 L-O-methylthreonine resistant 1 -0.73 0.32 -0.3
22 AT4G01660 ABC transporter 1 ABC transporter 1, ABC transporter
1, ATATH10
-0.73 0.31 -0.32
23 AT5G45950 GDSL-like Lipase/Acylhydrolase superfamily protein 0.73 0.32 -0.33
24 AT5G07250 RHOMBOID-like protein 3 RHOMBOID-like protein 3,
RHOMBOID-like protein 3
0.73 0.31 -0.3
25 AT5G49480 Ca2+-binding protein 1 Ca2+-binding protein 1,
Ca2+-binding protein 1
-0.73 0.33 -0.32
26 AT1G66890 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36
Blast hits to 36 proteins in 7 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).
0.72 0.32 -0.33
27 AT2G32020 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.72 0.31 -0.33
28 AT3G56270 Plant protein of unknown function (DUF827) 0.72 0.31 -0.31
29 AT1G14060 GCK domain-containing protein -0.72 0.29 -0.3
30 AT3G24440 Fibronectin type III domain-containing protein VIN3-LIKE 1, VERNALIZATION 5 -0.72 0.3 -0.32
31 AT3G13320 cation exchanger 2 atcax2, cation exchanger 2 -0.72 0.33 -0.3
32 AT5G15640 Mitochondrial substrate carrier family protein -0.72 0.31 -0.3
33 AT4G24920 secE/sec61-gamma protein transport protein -0.72 0.33 -0.29
34 AT1G52160 tRNAse Z3 tRNAse Z3 -0.72 0.31 -0.32
35 AT1G48470 glutamine synthetase 1;5 glutamine synthetase 1;5 0.71 0.32 -0.31
36 AT1G06560 NOL1/NOP2/sun family protein -0.71 0.33 -0.31
37 AT1G56145 Leucine-rich repeat transmembrane protein kinase -0.71 0.29 -0.34
38 AT5G10550 global transcription factor group E2 global transcription factor group
E2
0.71 0.33 -0.3
39 AT1G48970 NagB/RpiA/CoA transferase-like superfamily protein -0.71 0.31 -0.32
40 AT5G57490 voltage dependent anion channel 4 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 4, voltage
dependent anion channel 4
-0.71 0.31 -0.3
41 AT1G07030 Mitochondrial substrate carrier family protein -0.71 0.32 -0.31
42 AT1G72750 translocase inner membrane subunit 23-2 translocase inner membrane subunit
23-2, translocase inner membrane
subunit 23-2
-0.7 0.32 -0.35
43 AT3G54100 O-fucosyltransferase family protein -0.7 0.29 -0.33
44 AT2G20770 GCR2-like 2 GCR2-like 2 0.7 0.3 -0.31
45 AT1G29310 SecY protein transport family protein -0.7 0.32 -0.31
46 AT4G31180 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein
-0.69 0.31 -0.31
47 AT5G12840 nuclear factor Y, subunit A1 ATHAP2A, EMBRYO DEFECTIVE 2220,
HAP2A, nuclear factor Y, subunit
A1
0.69 0.3 -0.32
48 AT5G27540 MIRO-related GTP-ase 1 embryo defective 2473,
MIRO-related GTP-ase 1
-0.69 0.33 -0.31
49 AT3G09090 defective in exine formation protein (DEX1) DEFECTIVE IN EXINE FORMATION 1 -0.69 0.32 -0.3
50 AT4G37910 mitochondrial heat shock protein 70-1 mitochondrial heat shock protein
70-1
-0.69 0.3 -0.32
51 AT1G02205 Fatty acid hydroxylase superfamily ECERIFERUM 1 0.69 0.3 -0.3
52 AT2G29380 highly ABA-induced PP2C gene 3 highly ABA-induced PP2C gene 3 0.69 0.31 -0.32
53 AT4G34200 D-3-phosphoglycerate dehydrogenase embryo sac development arrest 9 -0.69 0.31 -0.3
54 AT3G23990 heat shock protein 60 heat shock protein 60, HEAT SHOCK
PROTEIN 60-3B
-0.69 0.31 -0.28
55 AT1G20980 squamosa promoter binding protein-like 14 SQUAMOSA PROMOTER BINDING
PROTEIN-LIKE 14, FBR6, squamosa
promoter binding protein-like 14,
SPL1R2
-0.69 0.34 -0.32
56 AT2G20390 unknown protein; Has 50 Blast hits to 50 proteins in 18
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.69 0.33 -0.29
57 AT3G17910 Surfeit locus 1 cytochrome c oxidase biogenesis protein EMBRYO DEFECTIVE 3121, SURFEIT 1 -0.69 0.32 -0.3
58 AT3G52450 plant U-box 22 plant U-box 22 -0.69 0.3 -0.31
59 AT2G19110 heavy metal atpase 4 ARABIDOPSIS HEAVY METAL ATPASE 4,
heavy metal atpase 4
-0.69 0.29 -0.34
60 AT3G01570 Oleosin family protein 0.69 0.31 -0.29
61 AT2G34840 Coatomer epsilon subunit 0.68 0.31 -0.31
62 AT2G18330 AAA-type ATPase family protein -0.68 0.29 -0.31
63 AT2G40090 ABC2 homolog 9 ABC2 homolog 9, ABC2 homolog 9 -0.68 0.31 -0.32
64 AT5G40530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
-0.68 0.31 -0.31
65 AT5G24930 CONSTANS-like 4 ATCOL4, CONSTANS-like 4 0.68 0.31 -0.32
66 AT5G56460 Protein kinase superfamily protein -0.68 0.31 -0.3
67 AT4G39980 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 3-deoxy-D-arabino-heptulosonate
7-phosphate synthase 1
-0.68 0.31 -0.32
68 AT2G47700 RING/U-box superfamily protein RED AND FAR-RED INSENSITIVE 2 0.68 0.3 -0.32
69 AT3G44330 INVOLVED IN: protein processing; LOCATED IN: mitochondrion,
endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nicalin
(InterPro:IPR016574), EF-Hand 1, calcium-binding site
(InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has
245 Blast hits to 243 proteins in 99 species: Archae - 6;
Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
-0.68 0.32 -0.33
70 AT3G54390 sequence-specific DNA binding transcription factors 0.68 0.31 -0.33
71 AT5G61960 MEI2-like protein 1 MEI2-like protein 1, MEI2-like
protein 1
-0.68 0.32 -0.3
72 AT1G65090 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G36100.1); Has 1435 Blast hits
to 1033 proteins in 192 species: Archae - 0; Bacteria - 61;
Metazoa - 511; Fungi - 123; Plants - 100; Viruses - 42;
Other Eukaryotes - 598 (source: NCBI BLink).
0.68 0.31 -0.31
73 AT1G49830 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein
0.67 0.32 -0.31
74 AT5G23750 Remorin family protein 0.67 0.32 -0.33
75 AT3G01040 galacturonosyltransferase 13 galacturonosyltransferase 13 -0.67 0.3 -0.32
76 AT5G43170 zinc-finger protein 3 zinc-finger protein 3, zinc-finger
protein 3
-0.67 0.34 -0.35
77 AT1G63120 RHOMBOID-like 2 RHOMBOID-like 2, RHOMBOID-like 2 0.67 0.34 -0.33
78 AT2G34160 Alba DNA/RNA-binding protein -0.67 0.34 -0.3
79 AT3G55620 Translation initiation factor IF6 eukaryotic initiation facor 6A,
embryo defective 1624
-0.67 0.32 -0.32
80 AT3G52140 tetratricopeptide repeat (TPR)-containing protein -0.67 0.3 -0.32
81 AT3G10380 subunit of exocyst complex 8 SUBUNIT OF EXOCYST COMPLEX 8,
subunit of exocyst complex 8
-0.67 0.34 -0.3
82 AT1G18810 phytochrome kinase substrate-related 0.67 0.29 -0.32
83 AT3G46170 NAD(P)-binding Rossmann-fold superfamily protein -0.67 0.33 -0.32
84 AT2G33210 heat shock protein 60-2 heat shock protein 60-2 -0.67 0.31 -0.3
85 AT5G51080 RNase H family protein 0.67 0.33 -0.3
86 AT5G18400 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S
biogenesis
-0.67 0.3 -0.31
87 AT2G05950 transposable element gene 0.67 0.31 -0.31
88 AT3G26980 membrane-anchored ubiquitin-fold protein 4 precursor membrane-anchored ubiquitin-fold
protein 4 precursor
-0.67 0.31 -0.3
89 AT4G38500 Protein of unknown function (DUF616) -0.67 0.31 -0.3
90 AT5G08590 SNF1-related protein kinase 2.1 ARABIDOPSIS SERINE/THREONINE
KINASE 2, ARABIDOPSIS SKP1-LIKE1,
SNRK2-1, SNF1-related protein
kinase 2.1, SRK2G
0.66 0.33 -0.31
91 AT1G05180 NAD(P)-binding Rossmann-fold superfamily protein AUXIN RESISTANT 1 -0.66 0.29 -0.33
92 AT5G08080 syntaxin of plants 132 ATSYP132, syntaxin of plants 132 -0.66 0.32 -0.31
93 AT5G61970 signal recognition particle-related / SRP-related -0.66 0.31 -0.32
94 AT5G11460 Protein of unknown function (DUF581) 0.66 0.32 -0.31
95 AT4G36880 cysteine proteinase1 cysteine proteinase1 -0.66 0.32 -0.31
96 AT1G04945 HIT-type Zinc finger family protein -0.66 0.31 -0.3
97 AT3G01800 Ribosome recycling factor -0.66 0.32 -0.3
98 AT2G24640 ubiquitin-specific protease 19 ubiquitin-specific protease 19 -0.66 0.31 -0.32
99 AT2G15000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast
hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.66 0.32 -0.3
100 AT5G47390 myb-like transcription factor family protein 0.66 0.33 -0.31
101 AT1G41797 transposable element gene 0.66 0.33 -0.34
102 ATMG00690 hypothetical protein ORF240A -0.66 0.35 -0.31
103 AT5G25280 serine-rich protein-related 0.66 0.32 -0.32
104 AT1G08570 atypical CYS HIS rich thioredoxin 4 atypical CYS HIS rich thioredoxin
4
0.65 0.33 -0.3
105 AT3G46580 methyl-CPG-binding domain protein 5 ATMBD5, METHYL-CPG-BINDING DOMAIN
PROTEIN 05, methyl-CPG-binding
domain protein 5
0.65 0.32 -0.33
106 AT1G69800 Cystathionine beta-synthase (CBS) protein 0.65 0.32 -0.31
107 AT1G64550 general control non-repressible 3 ATP-binding cassette F3, AtABCF3,
AtGCN20, general control
non-repressible 3, general control
non-repressible 20, general
control non-repressible 3,
susceptible to
coronatine-deficient Pst DC3000 5
-0.65 0.31 -0.32
108 AT4G33890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G14850.1); Has 133 Blast hits
to 131 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 2; Plants - 129; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).
-0.65 0.32 -0.33
109 AT5G19690 staurosporin and temperature sensitive 3-like A staurosporin and temperature
sensitive 3-like A
-0.65 0.29 -0.31
110 AT1G19690 NAD(P)-binding Rossmann-fold superfamily protein 0.65 0.31 -0.31
111 AT5G45070 phloem protein 2-A8 phloem protein 2-A8, phloem
protein 2-A8
-0.65 0.31 -0.33
112 AT4G12550 Auxin-Induced in Root cultures 1 Auxin-Induced in Root cultures 1 -0.65 0.31 -0.31
113 AT1G47640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2053, membrane
(InterPro:IPR019164); Has 204 Blast hits to 204 proteins in
84 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi
- 0; Plants - 50; Viruses - 0; Other Eukaryotes - 27
(source: NCBI BLink).
-0.65 0.32 -0.31
114 AT1G76340 golgi nucleotide sugar transporter 3 golgi nucleotide sugar transporter
3
-0.65 0.32 -0.29
115 AT3G47836 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
-0.65 0.3 -0.32
116 AT3G12670 CTP synthase family protein embryo defective 2742 -0.65 0.29 -0.31
117 AT2G15420 myosin heavy chain-related -0.65 0.33 -0.31
118 AT1G02205 Fatty acid hydroxylase superfamily ECERIFERUM 1 0.65 0.32 -0.3
119 AT2G33350 CCT motif family protein 0.65 0.34 -0.31
120 AT4G29520 LOCATED IN: endoplasmic reticulum, plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Saposin B
(InterPro:IPR008139); Has 137 Blast hits to 137 proteins in
50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi -
10; Plants - 36; Viruses - 0; Other Eukaryotes - 48
(source: NCBI BLink).
-0.65 0.33 -0.31
121 AT4G24120 YELLOW STRIPE like 1 YELLOW STRIPE LIKE 1, YELLOW
STRIPE like 1
-0.65 0.31 -0.31
122 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V
-0.65 0.31 -0.32
123 AT5G05370 Cytochrome b-c1 complex, subunit 8 protein -0.65 0.29 -0.32
124 AT5G58050 SHV3-like 4 Glycerophosphodiester
phosphodiesterase (GDPD) like 6,
SHV3-like 4
-0.65 0.31 -0.32
125 AT5G06550 CONTAINS InterPro DOMAIN/s: Transcription factor
jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347),
F-box domain, Skp2-like (InterPro:IPR022364), Transcription
factor jumonji (InterPro:IPR013129); BEST Arabidopsis
thaliana protein match is: transferases, transferring
glycosyl groups (TAIR:AT1G78280.1); Has 1762 Blast hits to
1747 proteins in 292 species: Archae - 0; Bacteria - 297;
Metazoa - 877; Fungi - 168; Plants - 221; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink).
-0.65 0.31 -0.31
126 AT1G03520 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein
0.65 0.33 -0.34
127 AT1G73470 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 72 Blast hits to 72 proteins
in 35 species: Archae - 0; Bacteria - 50; Metazoa - 0;
Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).
0.65 0.31 -0.32
128 AT5G30490 CONTAINS InterPro DOMAIN/s: Craniofacial development
protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast
hits to 324 proteins in 149 species: Archae - 0; Bacteria -
18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0;
Other Eukaryotes - 53 (source: NCBI BLink).
-0.65 0.31 -0.3
129 AT4G23540 ARM repeat superfamily protein -0.65 0.33 -0.3
130 AT2G15042 Leucine-rich repeat (LRR) family protein 0.64 0.32 -0.3
131 AT5G07080 HXXXD-type acyl-transferase family protein 0.64 0.32 -0.31
132 AT4G26490 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family
0.64 0.32 -0.3
133 AT1G06110 SKP1/ASK-interacting protein 16 SKP1/ASK-interacting protein 16 0.64 0.32 -0.32
134 AT5G60680 Protein of unknown function, DUF584 0.64 0.32 -0.3
135 AT1G75090 DNA glycosylase superfamily protein 0.64 0.33 -0.31
136 AT5G51210 oleosin3 oleosin3 0.64 0.33 -0.35
137 AT2G20670 Protein of unknown function (DUF506) 0.63 0.32 -0.29
138 AT4G37220 Cold acclimation protein WCOR413 family 0.63 0.31 -0.35
139 AT3G15940 UDP-Glycosyltransferase superfamily protein 0.63 0.31 -0.31
140 AT1G75110 Nucleotide-diphospho-sugar transferase family protein REDUCED RESIDUAL ARABINOSE 2 0.63 0.32 -0.32
141 AT3G03150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast
hits to 39 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
0.63 0.31 -0.32
142 AT4G13810 receptor like protein 47 receptor like protein 47, receptor
like protein 47
0.63 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
143 C0263 UMP - UMP pyrimidine salvage pathway,
dolichyl-diphosphooligosaccharide biosynthesis,
lipid IVA biosynthesis,
uridine-5'-phosphate biosynthesis,
pyrimidine ribonucleotides interconversion
0.79 0.45 -0.43 C0263
144 C0124 Isonicotinic acid - - - -0.79 0.44 -0.47
145 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II
-0.76 0.47 -0.44 C0105
146 C0065 Cellobiose D-(+)-Cellobiose Cellobiose xyloglucan biosynthesis,
starch degradation I
-0.66 0.34 -0.35 C0065