AT3G01560 : -
Query Information
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AGICode AT3G01560
Description Protein of unknown function (DUF1421)
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G01560 Protein of unknown function (DUF1421) 1 0.32 -0.3
2 AT3G20300 Protein of unknown function (DUF3537) 0.82 0.31 -0.32
3 AT5G09620 Octicosapeptide/Phox/Bem1p family protein 0.8 0.34 -0.31
4 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 0.8 0.33 -0.32
5 AT3G16785 phospholipase D P1 PHOSPHOLIPASE D ZETA 1,
phospholipase D P1, PHOSPHOLIPASE
D ZETA1, PLDZETA1		 0.79 0.3 -0.33
6 AT1G58360 amino acid permease 1 amino acid permease 1, NEUTRAL
AMINO ACID TRANSPORTER 2		 0.79 0.32 -0.3
7 AT1G17550 homology to ABI2 homology to ABI2 0.79 0.29 -0.32
8 AT4G35790 phospholipase D delta ARABIDOPSIS THALIANA PHOSPHOLIPASE
D DELTA, phospholipase D delta		 0.78 0.29 -0.33
9 AT1G80560 isopropylmalate dehydrogenase 2 ARABIDOPSIS ISOPROPYLMALATE
DEHYDROGENASE 2, isopropylmalate
dehydrogenase 2		 -0.77 0.3 -0.32
10 AT4G26080 Protein phosphatase 2C family protein ABA INSENSITIVE 1, AtABI1 0.77 0.3 -0.31
11 AT5G15520 Ribosomal protein S19e family protein -0.77 0.31 -0.32
12 AT4G24780 Pectin lyase-like superfamily protein -0.77 0.3 -0.3
13 AT2G15320 Leucine-rich repeat (LRR) family protein 0.77 0.29 -0.33
14 AT3G22380 time for coffee TIME FOR COFFEE 0.77 0.3 -0.35
15 AT4G25870 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.77 0.34 -0.35
16 AT5G57050 Protein phosphatase 2C family protein ABA INSENSITIVE 2, AtABI2 0.77 0.3 -0.3
17 AT2G35605 SWIB/MDM2 domain superfamily protein -0.77 0.32 -0.32
18 AT5G66050 Wound-responsive family protein 0.77 0.32 -0.32
19 AT1G24280 glucose-6-phosphate dehydrogenase 3 glucose-6-phosphate dehydrogenase
3		 -0.76 0.32 -0.33
20 AT2G18400 ribosomal protein L6 family protein -0.76 0.32 -0.31
21 AT1G76380 DNA-binding bromodomain-containing protein 0.76 0.31 -0.3
22 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.76 0.29 -0.33
23 AT3G04240 Tetratricopeptide repeat (TPR)-like superfamily protein secret agent 0.76 0.33 -0.33
24 AT4G05400 copper ion binding -0.75 0.32 -0.31
25 AT3G04770 40s ribosomal protein SA B 40s ribosomal protein SA B -0.75 0.3 -0.28
26 AT1G04300 TRAF-like superfamily protein 0.75 0.3 -0.31
27 AT1G65580 Endonuclease/exonuclease/phosphatase family protein FRAGILE FIBER3 0.75 0.3 -0.3
28 AT1G49910 Transducin/WD40 repeat-like superfamily protein BUB (BUDDING UNINHIBITED BY
BENZYMIDAZOL) 3.2		 -0.75 0.31 -0.32
29 AT2G32090 Lactoylglutathione lyase / glyoxalase I family protein 0.75 0.33 -0.32
30 AT1G54130 RELA/SPOT homolog 3 AT-RSH3, RELA/SPOT HOMOLOG 3,
RELA/SPOT homolog 3		 0.75 0.34 -0.31
31 AT3G07110 Ribosomal protein L13 family protein -0.75 0.29 -0.32
32 AT2G38410 ENTH/VHS/GAT family protein 0.75 0.3 -0.31
33 AT3G07270 GTP cyclohydrolase I -0.74 0.32 -0.31
34 AT5G67510 Translation protein SH3-like family protein -0.74 0.3 -0.31
35 AT1G35660 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 11 growth stages; Has 309 Blast hits to 256
proteins in 99 species: Archae - 0; Bacteria - 11; Metazoa
- 192; Fungi - 12; Plants - 36; Viruses - 0; Other
Eukaryotes - 58 (source: NCBI BLink).		 0.74 0.29 -0.33
36 AT5G11600 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G19990.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.74 0.32 -0.32
37 AT4G11460 cysteine-rich RLK (RECEPTOR-like protein kinase) 30 cysteine-rich RLK (RECEPTOR-like
protein kinase) 30		 -0.74 0.31 -0.32
38 AT1G27200 Domain of unknown function (DUF23) 0.74 0.33 -0.32
39 AT2G22430 homeobox protein 6 homeobox protein 6, homeobox
protein 6		 0.74 0.33 -0.34
40 AT5G27490 Integral membrane Yip1 family protein -0.74 0.32 -0.31
41 AT3G50380 Protein of unknown function (DUF1162) 0.73 0.34 -0.34
42 AT1G15930 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.73 0.34 -0.31
43 AT1G03820 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to
1122 proteins in 102 species: Archae - 2; Bacteria - 28;
Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other
Eukaryotes - 1148 (source: NCBI BLink).		 -0.73 0.3 -0.32
44 AT2G33370 Ribosomal protein L14p/L23e family protein -0.73 0.32 -0.32
45 AT4G13550 triglyceride lipases;triglyceride lipases 0.73 0.31 -0.33
46 AT5G10170 myo-inositol-1-phosphate synthase 3 MYO-INOSITOL-1-PHOSTPATE SYNTHASE
3, myo-inositol-1-phosphate
synthase 3		 -0.73 0.33 -0.33
47 AT1G77600 ARM repeat superfamily protein 0.73 0.32 -0.3
48 AT2G29570 proliferating cell nuclear antigen 2 A. THALIANA PROLIFERATING CELL
NUCLEAR ANTIGEN 2, proliferating
cell nuclear antigen 2		 -0.73 0.31 -0.33
49 AT3G22540 Protein of unknown function (DUF1677) -0.73 0.31 -0.31
50 AT1G31320 LOB domain-containing protein 4 LOB domain-containing protein 4 -0.73 0.35 -0.33
51 AT3G09300 OSBP(oxysterol binding protein)-related protein 3B OSBP(oxysterol binding
protein)-related protein 3B		 -0.73 0.31 -0.33
52 AT5G12140 cystatin-1 cystatin-1, cystatin-1 0.72 0.32 -0.32
53 AT4G25890 60S acidic ribosomal protein family -0.72 0.31 -0.34
54 AT1G73480 alpha/beta-Hydrolases superfamily protein 0.72 0.34 -0.34
55 AT3G01310 Phosphoglycerate mutase-like family protein 0.72 0.33 -0.3
56 AT5G45480 Protein of unknown function (DUF594) -0.72 0.31 -0.34
57 AT5G47650 nudix hydrolase homolog 2 nudix hydrolase homolog 2,
ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 2, nudix
hydrolase homolog 2		 0.72 0.3 -0.31
58 AT1G76580 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 0.72 0.33 -0.31
59 AT5G59850 Ribosomal protein S8 family protein -0.72 0.32 -0.33
60 AT5G16630 DNA repair protein Rad4 family ATRAD4, RAD4 0.72 0.32 -0.33
61 AT5G44020 HAD superfamily, subfamily IIIB acid phosphatase -0.72 0.29 -0.32
62 AT1G05210 Transmembrane protein 97, predicted -0.72 0.3 -0.3
63 AT3G09770 RING/U-box superfamily protein LOSS OF GDU 2 0.72 0.31 -0.31
64 AT2G38090 Duplicated homeodomain-like superfamily protein -0.72 0.31 -0.32
65 AT3G44590 60S acidic ribosomal protein family -0.71 0.31 -0.34
66 AT1G04830 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.71 0.3 -0.31
67 AT1G54830 nuclear factor Y, subunit C3 nuclear factor Y, subunit C3 0.71 0.32 -0.32
68 AT2G04880 zinc-dependent activator protein-1 ATWRKY1, WRKY1, zinc-dependent
activator protein-1		 0.71 0.3 -0.31
69 AT1G55510 branched-chain alpha-keto acid decarboxylase E1 beta
subunit		 branched-chain alpha-keto acid
decarboxylase E1 beta subunit		 0.71 0.33 -0.32
70 AT2G27285 Coiled-coil domain-containing protein 55 (DUF2040) 0.71 0.31 -0.33
71 AT3G05590 ribosomal protein L18 ribosomal protein L18 -0.71 0.32 -0.29
72 AT4G31410 Protein of unknown function (DUF1644) 0.71 0.34 -0.33
73 AT3G19290 ABRE binding factor 4 ABRE binding factor 4,
ABA-RESPONSIVE ELEMENT BINDING
PROTEIN 2		 0.71 0.32 -0.29
74 AT1G49860 glutathione S-transferase (class phi) 14 glutathione S-transferase (class
phi) 14, glutathione S-transferase
(class phi) 14		 -0.71 0.33 -0.35
75 AT1G07960 PDI-like 5-1 PDI-like 5-1, PDI-like 5-1 -0.71 0.31 -0.3
76 AT2G32380 Transmembrane protein 97, predicted -0.71 0.29 -0.32
77 AT4G18800 RAB GTPase homolog A1D ATHSGBP, ATRAB11B, RAB GTPase
homolog A1D, RAB GTPase homolog
A1D		 -0.7 0.32 -0.32
78 AT1G20693 high mobility group B2 HIGH MOBILITY GROUP BETA 1, high
mobility group B2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP D 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP D 2		 0.7 0.3 -0.34
79 AT1G65840 polyamine oxidase 4 polyamine oxidase 4, polyamine
oxidase 4		 -0.7 0.32 -0.3
80 AT5G15830 basic leucine-zipper 3 basic leucine-zipper 3, basic
leucine-zipper 3		 -0.7 0.3 -0.34
81 AT2G26260 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 3beta-hydroxysteroid-dehydrogenase
/decarboxylase isoform 2,
3beta-hydroxysteroid-dehydrogenase
/decarboxylase isoform 2		 -0.7 0.3 -0.32
82 AT4G26750 hydroxyproline-rich glycoprotein family protein extensin-like 0.7 0.32 -0.3
83 AT4G37180 Homeodomain-like superfamily protein 0.7 0.3 -0.31
84 AT1G34120 inositol polyphosphate 5-phosphatase I AT5P1, MYO-INOSITOL POLYPHOSPHATE
5-PHOSPHATASE 1, ATIP5PI, inositol
polyphosphate 5-phosphatase I		 0.7 0.31 -0.32
85 AT2G28250 Protein kinase superfamily protein NCRK -0.7 0.28 -0.33
86 AT1G07530 SCARECROW-like 14 ARABIDOPSIS THALIANA GRAS (GAI,
RGA, SCR) 2, GRAS (GAI, RGA, SCR)
2, SCARECROW-like 14		 0.7 0.31 -0.33
87 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 0.7 0.29 -0.31
88 AT1G68570 Major facilitator superfamily protein 0.7 0.32 -0.3
89 AT1G78120 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 12 -0.7 0.3 -0.3
90 AT4G26230 Ribosomal protein L31e family protein -0.7 0.3 -0.31
91 AT2G24170 Endomembrane protein 70 protein family -0.7 0.32 -0.33
92 AT1G53050 Protein kinase superfamily protein 0.69 0.31 -0.33
93 AT4G19390 Uncharacterised protein family (UPF0114) 0.69 0.31 -0.3
94 AT1G59510 Carbohydrate-binding protein CF9 0.69 0.32 -0.3
95 AT2G43050 Plant invertase/pectin methylesterase inhibitor superfamily ATPMEPCRD -0.69 0.34 -0.33
96 AT5G01990 Auxin efflux carrier family protein 0.69 0.33 -0.32
97 AT3G13340 Transducin/WD40 repeat-like superfamily protein 0.69 0.31 -0.32
98 AT5G39570 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match is:
glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.69 0.33 -0.33
99 AT1G69530 expansin A1 AT-EXP1, ATEXP1, expansin A1,
ATHEXP ALPHA 1.2, EXPANSIN 1,
expansin A1		 -0.69 0.34 -0.32
100 AT3G25100 cell division cycle 45 cell division cycle 45 -0.69 0.33 -0.32
101 AT5G14420 RING domain ligase2 RING domain ligase2 0.69 0.3 -0.31
102 AT2G34050 INVOLVED IN: protein complex assembly; LOCATED IN:
mitochondrion, chloroplast; EXPRESSED IN: 19 plant
structures; EXPRESSED DURING: 9 growth stages; CONTAINS
InterPro DOMAIN/s: ATP11 (InterPro:IPR010591); Has 304
Blast hits to 304 proteins in 167 species: Archae - 0;
Bacteria - 0; Metazoa - 101; Fungi - 112; Plants - 39;
Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).		 -0.69 0.3 -0.3
103 AT5G50890 alpha/beta-Hydrolases superfamily protein -0.69 0.32 -0.29
104 AT2G33600 NAD(P)-binding Rossmann-fold superfamily protein -0.68 0.32 -0.33
105 AT1G69295 plasmodesmata callose-binding protein 4 plasmodesmata callose-binding
protein 4		 0.68 0.33 -0.32
106 AT3G07360 plant U-box 9 ARABIDOPSIS THALIANA PLANT U-BOX
9, plant U-box 9		 0.68 0.32 -0.31
107 AT3G54260 TRICHOME BIREFRINGENCE-LIKE 36 TRICHOME BIREFRINGENCE-LIKE 36 -0.68 0.32 -0.33
108 AT2G16990 Major facilitator superfamily protein 0.68 0.3 -0.31
109 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 0.68 0.33 -0.33
110 AT5G60140 AP2/B3-like transcriptional factor family protein -0.68 0.35 -0.28
111 AT3G02885 GAST1 protein homolog 5 GAST1 protein homolog 5 -0.68 0.31 -0.3
112 AT2G41600 Mitochondrial glycoprotein family protein -0.68 0.33 -0.33
113 AT4G39140 RING/U-box superfamily protein 0.68 0.3 -0.32
114 AT5G44080 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.68 0.31 -0.32
115 AT5G62090 SEUSS-like 2 SEUSS-like 2 0.68 0.3 -0.3
116 AT3G25540 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 LONGEVITY ASSURANCE GENE 1 -0.68 0.31 -0.32
117 AT3G20910 nuclear factor Y, subunit A9 nuclear factor Y, subunit A9 0.68 0.3 -0.31
118 AT1G78450 SOUL heme-binding family protein -0.67 0.31 -0.31
119 AT3G25790 myb-like transcription factor family protein -0.67 0.32 -0.31
120 AT3G19430 late embryogenesis abundant protein-related / LEA
protein-related		 -0.67 0.32 -0.33
121 AT3G23660 Sec23/Sec24 protein transport family protein -0.67 0.31 -0.32
122 AT4G24560 ubiquitin-specific protease 16 ubiquitin-specific protease 16 0.67 0.31 -0.31
123 AT3G05880 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2A 0.67 0.33 -0.3
124 AT5G07290 MEI2-like 4 MEI2-like 4, MEI2-like 4 0.67 0.31 -0.31
125 AT1G05890 RING/U-box superfamily protein ARIADNE 5, ARABIDOPSIS ARIADNE 5 0.67 0.32 -0.32
126 AT1G43620 UDP-Glycosyltransferase superfamily protein TRANSPARENT TESTA 15, UGT80B1 0.67 0.31 -0.33
127 AT1G56300 Chaperone DnaJ-domain superfamily protein 0.67 0.33 -0.32
128 AT1G73640 RAB GTPase homolog A6A RAB GTPase homolog A6A, RAB GTPase
homolog A6A		 -0.67 0.31 -0.34
129 AT5G06740 Concanavalin A-like lectin protein kinase family protein -0.67 0.33 -0.31
130 AT4G29430 ribosomal protein S15A E ribosomal protein S15A E -0.66 0.31 -0.3
131 AT4G17890 ARF-GAP domain 8 ARF-GAP domain 8 -0.66 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
132 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - 0.74 0.49 -0.45