AT3G01650 : RING domain ligase1
Query Information
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AGICode AT3G01650
Description RING domain ligase1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G01650 RING domain ligase1 RING domain ligase1 1 0.33 -0.33
2 AT3G57240 beta-1,3-glucanase 3 beta-1,3-glucanase 3 -0.73 0.31 -0.31
3 AT2G37590 DNA binding with one finger 2.4 ATDOF2.4, DNA binding with one
finger 2.4		 0.69 0.32 -0.31
4 AT2G26440 Plant invertase/pectin methylesterase inhibitor superfamily -0.68 0.31 -0.32
5 AT2G45170 AUTOPHAGY 8E AUTOPHAGY 8E, AUTOPHAGY 8E 0.67 0.33 -0.32
6 AT1G09250 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.66 0.3 -0.3
7 AT5G64090 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Hyccin
(InterPro:IPR018619); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G21050.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.66 0.32 -0.31
8 AT1G76930 extensin 4 EXTENSIN 1, extensin 4, extensin
1, extensin 4, OBP3-RESPONSIVE
GENE 5		 -0.66 0.32 -0.31
9 AT5G40780 lysine histidine transporter 1 lysine histidine transporter 1 -0.66 0.33 -0.3
10 AT1G55520 TATA binding protein 2 A. THALIANA TATA BINDING PROTEIN
2, TATA binding protein 2		 0.65 0.31 -0.31
11 AT5G62580 ARM repeat superfamily protein 0.65 0.34 -0.32
12 AT1G14687 homeobox protein 32 homeobox protein 32, homeobox
protein 32, ZINC FINGER
HOMEODOMAIN 14		 -0.65 0.32 -0.3
13 AT1G05490 chromatin remodeling 31 chromatin remodeling 31 -0.65 0.32 -0.29
14 AT3G59810 Small nuclear ribonucleoprotein family protein -0.64 0.31 -0.34
15 AT5G14920 Gibberellin-regulated family protein -0.64 0.34 -0.32
16 AT1G13110 cytochrome P450, family 71 subfamily B, polypeptide 7 cytochrome P450, family 71
subfamily B, polypeptide 7		 -0.64 0.31 -0.3
17 AT1G65500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 23 Blast hits to 23 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.29 -0.31
18 AT2G15240 UNC-50 family protein 0.63 0.31 -0.32
19 AT5G08260 serine carboxypeptidase-like 35 serine carboxypeptidase-like 35 -0.63 0.31 -0.33
20 AT2G43620 Chitinase family protein -0.63 0.31 -0.32
21 AT4G12890 Gamma interferon responsive lysosomal thiol (GILT)
reductase family protein		 -0.62 0.31 -0.32
22 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.62 0.31 -0.32
23 AT3G21040 transposable element gene -0.62 0.31 -0.32
24 AT3G17510 CBL-interacting protein kinase 1 CBL-interacting protein kinase 1,
SNF1-RELATED PROTEIN KINASE 3.16		 0.62 0.32 -0.34
25 AT5G15240 Transmembrane amino acid transporter family protein 0.62 0.32 -0.3
26 AT3G19930 sugar transporter 4 SUGAR TRANSPORTER 4, sugar
transporter 4		 -0.62 0.32 -0.31
27 AT2G23440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 25 Blast hits
to 25 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.3 -0.31
28 AT5G02220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.61 0.32 -0.31
29 AT5G40840 Rad21/Rec8-like family protein Sister chromatid cohesion 1 (SCC1)
protein homolog 2, SYN2		 -0.6 0.3 -0.33
30 AT4G39230 NmrA-like negative transcriptional regulator family protein -0.6 0.31 -0.32
31 AT1G75230 DNA glycosylase superfamily protein 0.59 0.31 -0.31
32 AT1G80130 Tetratricopeptide repeat (TPR)-like superfamily protein -0.59 0.32 -0.3
33 AT2G30830 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.59 0.31 -0.31
34 AT1G21250 cell wall-associated kinase PRO25, cell wall-associated kinase -0.59 0.34 -0.33
35 AT1G30820 CTP synthase family protein 0.58 0.32 -0.3
36 AT1G68170 nodulin MtN21 /EamA-like transporter family protein -0.58 0.33 -0.31
37 AT1G01920 SET domain-containing protein 0.58 0.3 -0.3
38 AT1G13230 Leucine-rich repeat (LRR) family protein -0.58 0.32 -0.29
39 AT5G46270 Disease resistance protein (TIR-NBS-LRR class) family -0.57 0.32 -0.31
40 AT1G02100 Leucine carboxyl methyltransferase SUPPRESSOR OF BRI1 0.57 0.31 -0.31
41 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 0.57 0.3 -0.3
42 AT3G46970 alpha-glucan phosphorylase 2 Arabidopsis thaliana alpha-glucan
phosphorylase 2, alpha-glucan
phosphorylase 2		 -0.57 0.31 -0.33
43 AT5G02190 Eukaryotic aspartyl protease family protein ARABIDOPSIS THALIANA ASPARTIC
PROTEASE 38, EMBRYO DEFECTIVE 24,
PROMOTION OF CELL SURVIVAL 1		 -0.57 0.31 -0.32
44 AT5G46050 peptide transporter 3 ARABIDOPSIS THALIANA PEPTIDE
TRANSPORTER 3, peptide transporter
3		 -0.57 0.32 -0.31
45 AT3G09900 RAB GTPase homolog E1E ATRAB8E, RAB GTPase homolog E1E,
RAB GTPase homolog E1E		 0.57 0.32 -0.3
46 AT2G16600 rotamase CYP 3 rotamase CYP 3 -0.57 0.31 -0.3
47 AT5G16380 Protein of unknown function, DUF538 -0.57 0.33 -0.3
48 AT2G25470 receptor like protein 21 receptor like protein 21, receptor
like protein 21		 -0.56 0.3 -0.31
49 AT4G00190 pectin methylesterase 38 A. THALIANA PECTIN METHYLESTERASE
38, pectin methylesterase 38		 -0.56 0.33 -0.3
50 AT4G23280 cysteine-rich RLK (RECEPTOR-like protein kinase) 20 cysteine-rich RLK (RECEPTOR-like
protein kinase) 20		 -0.56 0.31 -0.36
51 AT3G26330 cytochrome P450, family 71, subfamily B, polypeptide 37 cytochrome P450, family 71,
subfamily B, polypeptide 37		 0.56 0.31 -0.32
52 AT4G13260 Flavin-binding monooxygenase family protein YUCCA2 0.56 0.31 -0.32
53 AT1G78220 general regulatory factor 13 GF 14 PI CHAIN, general regulatory
factor 13		 -0.55 0.29 -0.31
54 AT1G54070 Dormancy/auxin associated family protein -0.55 0.33 -0.32
55 AT4G36220 ferulic acid 5-hydroxylase 1 CYP84A1, ferulic acid
5-hydroxylase 1		 -0.55 0.32 -0.33
56 AT5G43440 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.55 0.32 -0.29
57 AT3G29220 transposable element gene 0.55 0.3 -0.29
58 AT3G56740 Ubiquitin-associated (UBA) protein 0.55 0.32 -0.31
59 AT3G50740 UDP-glucosyl transferase 72E1 UDP-glucosyl transferase 72E1 -0.55 0.28 -0.31
60 AT3G15280 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant
structures; EXPRESSED DURING: L mature pollen stage, 4
anthesis, petal differentiation and expansion stage; Has 36
Blast hits to 36 proteins in 15 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 33; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.54 0.33 -0.32
61 AT2G29120 glutamate receptor 2.7 glutamate receptor 2.7, GLUTAMATE
RECEPTOR 2.7, glutamate receptor
2.7		 -0.54 0.33 -0.3
62 AT1G73805 Calmodulin binding protein-like SAR Deficient 1 -0.54 0.31 -0.33
63 AT3G28155 BEST Arabidopsis thaliana protein match is: ARM repeat
superfamily protein (TAIR:AT2G35630.1); Has 19 Blast hits
to 19 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.31 -0.29
64 AT5G47880 eukaryotic release factor 1-1 eukaryotic release factor 1-1 -0.54 0.3 -0.31
65 AT4G25710 Galactose oxidase/kelch repeat superfamily protein 0.54 0.29 -0.33
66 AT3G03830 SAUR-like auxin-responsive protein family 0.54 0.3 -0.33
67 AT1G07840 Sas10/Utp3/C1D family -0.54 0.32 -0.32
68 AT1G07390 receptor like protein 1 receptor like protein 1, receptor
like protein 1		 -0.54 0.31 -0.33
69 AT3G45430 Concanavalin A-like lectin protein kinase family protein 0.53 0.31 -0.31
70 AT3G08620 RNA-binding KH domain-containing protein -0.53 0.31 -0.3
71 AT2G24410 BEST Arabidopsis thaliana protein match is: SMAD/FHA
domain-containing protein (TAIR:AT3G20550.1); Has 194
Blast hits to 194 proteins in 92 species: Archae - 0;
Bacteria - 0; Metazoa - 118; Fungi - 33; Plants - 30;
Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).		 -0.53 0.29 -0.3
72 AT4G17570 GATA transcription factor 26 GATA transcription factor 26 -0.53 0.31 -0.31
73 AT1G07740 Tetratricopeptide repeat (TPR)-like superfamily protein -0.53 0.32 -0.31
74 AT3G50950 HOPZ-ACTIVATED RESISTANCE 1 HOPZ-ACTIVATED RESISTANCE 1 -0.53 0.31 -0.31
75 AT1G79620 Leucine-rich repeat protein kinase family protein 0.52 0.32 -0.32
76 AT1G55960 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.52 0.29 -0.32
77 AT2G02820 myb domain protein 88 myb domain protein 88, myb domain
protein 88		 0.52 0.3 -0.31
78 AT5G60250 zinc finger (C3HC4-type RING finger) family protein -0.52 0.3 -0.32
79 AT4G24410 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.31 -0.32
80 AT5G14940 Major facilitator superfamily protein -0.52 0.3 -0.31
81 AT1G10370 Glutathione S-transferase family protein GLUTATHIONE S-TRANSFERASE TAU 17,
EARLY-RESPONSIVE TO DEHYDRATION 9,
GLUTATHIONE S-TRANSFERASE 30,
GLUTATHIONE S-TRANSFERASE 30B,
GLUTATHIONE S-TRANSFERASE U17		 -0.52 0.34 -0.33
82 AT4G14365 XB3 ortholog 4 in Arabidopsis thaliana XB3 ortholog 4 in Arabidopsis
thaliana		 -0.52 0.3 -0.33
83 AT2G31870 Poly (ADP-ribose) glycohydrolase (PARG) poly(ADP-ribose) glycohydrolase 1,
Sanskrit for 'bright'		 -0.52 0.31 -0.31
84 AT1G48050 Ku80 family protein ARABIDOPSIS THALIANA KU80 HOMOLOG,
KU80		 0.51 0.32 -0.3
85 AT5G19200 NAD(P)-binding Rossmann-fold superfamily protein TSC10B 0.51 0.3 -0.31
86 AT2G37900 Major facilitator superfamily protein 0.51 0.34 -0.3
87 AT5G05980 DHFS-FPGS homolog B DHFS-FPGS homolog B, DHFS-FPGS
homolog B, folylpolyglutamate
synthetase 1		 0.51 0.31 -0.33
88 AT4G13700 purple acid phosphatase 23 ATPAP23, purple acid phosphatase
23		 0.5 0.31 -0.32
89 AT1G19510 RAD-like 5 RAD-like 5, RAD-like 5,
RADIALIS-LIKE SANT/MYB 4		 0.5 0.33 -0.35
90 AT5G55350 MBOAT (membrane bound O-acyl transferase) family protein 0.5 0.3 -0.3
91 AT5G13300 ARF GTPase-activating protein ARF-GAP DOMAIN3, SCARFACE, ASCULAR
NETWORK DEFECTIVE 3		 0.5 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
92 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		-0.72 0.41 -0.43 C0035