AT3G01540 : ARABIDOPSIS THALIANA DEAD BOX RNA HELICASE 1
Query Information
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AGICode AT3G01540
Description DEAD box RNA helicase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G01540 DEAD box RNA helicase 1 ARABIDOPSIS THALIANA DEAD BOX RNA
HELICASE 1, DEAD box RNA helicase
1		 1 0.32 -0.31
2 AT1G74250 DNAJ heat shock N-terminal domain-containing protein 0.78 0.3 -0.35
3 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 0.76 0.29 -0.32
4 AT1G10410 Protein of unknown function (DUF1336) 0.76 0.29 -0.31
5 AT5G42820 Zinc finger C-x8-C-x5-C-x3-H type family protein ATU2AF35B, U2AF35B 0.74 0.31 -0.32
6 AT4G16440 ferredoxin hydrogenases 0.74 0.31 -0.33
7 AT2G34620 Mitochondrial transcription termination factor family
protein		 -0.73 0.32 -0.31
8 AT4G01870 tolB protein-related 0.73 0.3 -0.33
9 AT3G04010 O-Glycosyl hydrolases family 17 protein 0.73 0.3 -0.31
10 AT2G37520 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.72 0.3 -0.34
11 AT5G18140 Chaperone DnaJ-domain superfamily protein -0.72 0.32 -0.31
12 AT5G02370 ATP binding microtubule motor family protein -0.72 0.33 -0.3
13 AT4G27500 proton pump interactor 1 proton pump interactor 1 0.72 0.31 -0.31
14 AT3G58570 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.71 0.31 -0.35
15 AT3G14010 CTC-interacting domain 4 CTC-interacting domain 4 0.7 0.33 -0.33
16 AT3G52720 alpha carbonic anhydrase 1 alpha carbonic anhydrase 1, A.
THALIANA ALPHA CARBONIC ANHYDRASE
1, CARBONIC ANHYDRASE 1		 -0.7 0.31 -0.31
17 AT1G76100 plastocyanin 1 plastocyanin 1 -0.7 0.3 -0.32
18 AT5G60540 pyridoxine biosynthesis 2 PYRIDOXINE BIOSYNTHESIS 2, EMBRYO
DEFECTIVE 2407, pyridoxine
biosynthesis 2		 0.7 0.33 -0.29
19 AT2G37790 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C10		 -0.69 0.3 -0.3
20 AT1G65420 Protein of unknown function (DUF565) NONPHOTOCHEMICAL QUENCHING 7 -0.69 0.31 -0.32
21 AT3G20630 ubiquitin-specific protease 14 ATUBP14, phosphate deficiency root
hair defective1, TITAN6,
ubiquitin-specific protease 14		 0.68 0.33 -0.32
22 AT1G19000 Homeodomain-like superfamily protein -0.67 0.31 -0.3
23 AT2G15920 transposable element gene -0.67 0.32 -0.35
24 AT3G10300 Calcium-binding EF-hand family protein 0.67 0.32 -0.32
25 AT2G35470 unknown protein; Has 25 Blast hits to 25 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.3 -0.32
26 AT5G42950 GYF domain-containing protein 0.66 0.31 -0.32
27 AT3G12570 FYD FYD 0.66 0.32 -0.32
28 AT2G36930 zinc finger (C2H2 type) family protein 0.65 0.34 -0.31
29 AT3G48860 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins
in 897 species: Archae - 180; Bacteria - 1190; Metazoa -
6552; Fungi - 1361; Plants - 886; Viruses - 50; Other
Eukaryotes - 2210 (source: NCBI BLink).		 0.65 0.32 -0.35
30 AT2G28410 unknown protein; Has 18 Blast hits to 18 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.32 -0.31
31 AT1G74710 ADC synthase superfamily protein ARABIDOPSIS ISOCHORISMATE SYNTHASE
1, ENHANCED DISEASE SUSCEPTIBILITY
TO ERYSIPHE ORONTII 16,
ISOCHORISMATE SYNTHASE 1,
SALICYLIC ACID INDUCTION DEFICIENT
2		 -0.65 0.32 -0.3
32 AT3G01980 NAD(P)-binding Rossmann-fold superfamily protein -0.65 0.3 -0.33
33 AT3G12640 RNA binding (RRM/RBD/RNP motifs) family protein 0.64 0.31 -0.32
34 AT5G19260 Protein of unknown function (DUF3049) FANTASTIC FOUR 3 -0.64 0.31 -0.3
35 AT4G34510 3-ketoacyl-CoA synthase 17 3-ketoacyl-CoA synthase 17 -0.64 0.32 -0.31
36 AT1G09770 cell division cycle 5 ARABIDOPSIS THALIANA CELL DIVISION
CYCLE 5, ARABIDOPSIS THALIANA MYB
DOMAIN CELL DIVISION CYCLE 5, cell
division cycle 5		 0.64 0.32 -0.31
37 AT2G21180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits
to 124 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.32 -0.32
38 AT3G15351 unknown protein; Has 50 Blast hits to 50 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0;
Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.3 -0.31
39 AT1G55830 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF812 (InterPro:IPR008530); Has 10940
Blast hits to 7289 proteins in 653 species: Archae - 228;
Bacteria - 791; Metazoa - 6174; Fungi - 805; Plants - 342;
Viruses - 19; Other Eukaryotes - 2581 (source: NCBI BLink).		 0.64 0.34 -0.32
40 AT1G78020 Protein of unknown function (DUF581) -0.64 0.32 -0.32
41 AT1G26110 decapping 5 decapping 5 0.63 0.31 -0.31
42 AT2G23980 cyclic nucleotide-gated channel 6 cyclic nucleotide-gated channel 6,
CYCLIC NUCLEOTIDE GATED CHANNEL 6,
cyclic nucleotide-gated channel 6		 0.63 0.29 -0.35
43 AT3G60840 microtubule-associated protein 65-4 microtubule-associated protein
65-4		 -0.63 0.32 -0.29
44 AT1G69310 WRKY DNA-binding protein 57 ATWRKY57, WRKY DNA-binding protein
57		 0.63 0.31 -0.29
45 AT1G26560 beta glucosidase 40 beta glucosidase 40 -0.63 0.31 -0.3
46 AT1G56345 Pseudouridine synthase family protein 0.62 0.31 -0.31
47 AT2G38970 Zinc finger (C3HC4-type RING finger) family protein -0.62 0.3 -0.31
48 AT2G41290 strictosidine synthase-like 2 strictosidine synthase-like 2 -0.62 0.29 -0.32
49 AT5G67460 O-Glycosyl hydrolases family 17 protein -0.62 0.32 -0.34
50 AT1G74790 catalytics 0.62 0.3 -0.31
51 AT1G64040 type one serine/threonine protein phosphatase 3 type one serine/threonine protein
phosphatase 3		 0.62 0.29 -0.33
52 AT5G06460 ubiquitin activating enzyme 2 ARABIDOPSIS THALIANA UBIQUITIN
ACTIVATING ENZYME 2, ubiquitin
activating enzyme 2		 0.62 0.32 -0.31
53 AT5G51300 splicing factor-related 0.62 0.33 -0.3
54 AT2G35020 N-acetylglucosamine-1-phosphate uridylyltransferase 2 N-acetylglucosamine-1-phosphate
uridylyltransferase 2		 -0.61 0.31 -0.35
55 AT2G42390 protein kinase C substrate, heavy chain-related -0.61 0.31 -0.31
56 AT1G01650 SIGNAL PEPTIDE PEPTIDASE-LIKE 4 ARABIDOPSIS THALIANA SIGNAL
PEPTIDE PEPTIDASE-LIKE 4, SIGNAL
PEPTIDE PEPTIDASE-LIKE 4		 0.61 0.33 -0.3
57 AT2G45210 SAUR-like auxin-responsive protein family 0.61 0.32 -0.29
58 AT5G67530 plant U-box 49 PLANT U-BOX 49, plant U-box 49 0.61 0.31 -0.31
59 AT2G30470 high-level expression of sugar-inducible gene 2 high-level expression of
sugar-inducible gene 2,
VP1/ABI3-LIKE 1		 0.61 0.31 -0.29
60 AT3G54430 SHI-related sequence 6 SHI-related sequence 6 -0.61 0.31 -0.32
61 AT2G24260 LJRHL1-like 1 LJRHL1-like 1 0.61 0.31 -0.31
62 AT1G70370 polygalacturonase 2 polygalacturonase 2 -0.61 0.32 -0.3
63 AT3G49725 GTP-binding protein, HflX 0.6 0.32 -0.3
64 AT3G23290 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 4 -0.6 0.33 -0.33
65 AT1G12730 GPI transamidase subunit PIG-U -0.6 0.32 -0.32
66 AT4G17410 DWNN domain, a CCHC-type zinc finger 0.6 0.32 -0.33
67 AT3G26440 Protein of unknown function (DUF707) 0.6 0.34 -0.31
68 AT4G32910 CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein,
Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.6 0.3 -0.3
69 AT1G61260 Protein of unknown function (DUF761) -0.6 0.32 -0.28
70 AT3G20720 unknown protein; Has 184 Blast hits to 181 proteins in 66
species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi -
0; Plants - 40; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.6 0.32 -0.33
71 AT4G19660 NPR1-like protein 4 ATNPR4, NPR1-like protein 4 -0.59 0.33 -0.34
72 AT1G21200 sequence-specific DNA binding transcription factors 0.59 0.32 -0.31
73 AT2G37410 translocase inner membrane subunit 17-2 translocase inner membrane subunit
17-2, TRANSLOCASE OF THE INNER
MEMBRANE 17, translocase inner
membrane subunit 17-2		 0.59 0.31 -0.34
74 AT5G58410 HEAT/U-box domain-containing protein 0.59 0.31 -0.36
75 AT5G52540 Protein of unknown function (DUF819) -0.59 0.32 -0.31
76 AT2G19470 casein kinase I-like 5 casein kinase I-like 5 0.59 0.32 -0.32
77 AT3G12040 DNA-3-methyladenine glycosylase (MAG) -0.58 0.3 -0.31
78 AT5G23400 Leucine-rich repeat (LRR) family protein -0.58 0.29 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
79 C0130 Kaempferol-3-O-α-rhamnopyranosyl(1,2)-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-α-L-rhamnopyranosyl(1,2)-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside - -0.61 0.43 -0.46