AT3G03600 : ribosomal protein S2
Query Information
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AGICode AT3G03600
Description ribosomal protein S2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G03600 ribosomal protein S2 ribosomal protein S2 1 0.31 -0.31
2 AT3G48570 secE/sec61-gamma protein transport protein 0.88 0.31 -0.32
3 AT1G79550 phosphoglycerate kinase phosphoglycerate kinase 0.87 0.33 -0.32
4 AT2G30970 aspartate aminotransferase 1 aspartate aminotransferase 1 0.86 0.33 -0.29
5 AT2G17720 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 prolyl 4-hydroxylase 5 0.84 0.3 -0.31
6 AT5G13420 Aldolase-type TIM barrel family protein 0.84 0.33 -0.31
7 AT5G54900 RNA-binding protein 45A RNA-binding protein 45A,
RNA-binding protein 45A		 0.84 0.32 -0.31
8 AT3G57280 Transmembrane proteins 14C 0.83 0.33 -0.3
9 AT2G35790 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1301 (InterPro:IPR009724); Has 116
Blast hits to 116 proteins in 49 species: Archae - 0;
Bacteria - 0; Metazoa - 53; Fungi - 6; Plants - 49; Viruses
- 0; Other Eukaryotes - 8 (source: NCBI BLink).		 0.83 0.3 -0.33
10 AT2G37250 adenosine kinase adenosine kinase, ATPADK1 0.83 0.29 -0.31
11 AT2G36530 Enolase ENOLASE 2, LOW EXPRESSION OF
OSMOTICALLY RESPONSIVE GENES 2		 0.83 0.32 -0.32
12 AT1G03860 prohibitin 2 prohibitin 2, prohibitin 2 0.83 0.31 -0.27
13 AT1G27970 nuclear transport factor 2B nuclear transport factor 2B 0.83 0.35 -0.3
14 AT4G26210 Mitochondrial ATP synthase subunit G protein 0.82 0.32 -0.34
15 AT3G48140 B12D protein 0.82 0.32 -0.3
16 AT1G26750 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.82 0.34 -0.32
17 AT1G30580 GTP binding 0.81 0.32 -0.34
18 AT5G08300 Succinyl-CoA ligase, alpha subunit 0.81 0.32 -0.34
19 AT1G07140 Pleckstrin homology (PH) domain superfamily protein SIRANBP 0.8 0.32 -0.33
20 AT2G17130 isocitrate dehydrogenase subunit 2 isocitrate dehydrogenase II,
isocitrate dehydrogenase subunit 2		 0.8 0.31 -0.32
21 AT5G02050 Mitochondrial glycoprotein family protein 0.8 0.32 -0.32
22 AT1G61770 Chaperone DnaJ-domain superfamily protein 0.8 0.31 -0.32
23 AT3G52730 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family
protein		 0.8 0.31 -0.31
24 AT1G53760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane, plastid, membrane;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2343 (InterPro:IPR018786); Has 171
Blast hits to 171 proteins in 90 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 127; Plants - 41;
Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).		 0.8 0.32 -0.29
25 AT4G31130 Protein of unknown function (DUF1218) 0.8 0.3 -0.33
26 AT2G20390 unknown protein; Has 50 Blast hits to 50 proteins in 18
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.8 0.32 -0.29
27 AT5G20400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.8 0.31 -0.31
28 AT5G14030 translocon-associated protein beta (TRAPB) family protein 0.8 0.31 -0.31
29 AT3G46560 Tim10/DDP family zinc finger protein embryo defective 2474, TIM9 0.8 0.33 -0.34
30 AT5G40770 prohibitin 3 prohibitin 3, prohibitin 3 0.8 0.3 -0.31
31 AT4G29480 Mitochondrial ATP synthase subunit G protein 0.79 0.31 -0.31
32 AT1G36050 Endoplasmic reticulum vesicle transporter protein 0.79 0.28 -0.31
33 AT3G51790 transmembrane protein G1P-related 1 transmembrane protein G1P-related
1, transmembrane protein
G1P-related 1		 0.79 0.31 -0.3
34 AT3G49320 Metal-dependent protein hydrolase 0.79 0.31 -0.32
35 AT1G16870 mitochondrial 28S ribosomal protein S29-related 0.79 0.3 -0.31
36 AT4G11150 vacuolar ATP synthase subunit E1 embryo defective 2448, vacuolar
ATP synthase subunit E1, TUFF,
VHA-E1		 0.79 0.33 -0.3
37 AT4G01100 adenine nucleotide transporter 1 adenine nucleotide transporter 1 0.79 0.31 -0.34
38 AT5G61780 TUDOR-SN protein 2 Arabidopsis thaliana TUDOR-SN
protein 2, TUDOR-SN protein 2,
TUDOR-SN protein 2		 0.79 0.33 -0.29
39 AT4G24920 secE/sec61-gamma protein transport protein 0.79 0.31 -0.32
40 AT5G67220 FMN-linked oxidoreductases superfamily protein 0.79 0.32 -0.32
41 AT3G01800 Ribosome recycling factor 0.79 0.3 -0.34
42 AT5G53540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.79 0.32 -0.31
43 AT4G19410 Pectinacetylesterase family protein 0.79 0.31 -0.33
44 AT3G52930 Aldolase superfamily protein 0.78 0.3 -0.31
45 AT1G76160 SKU5 similar 5 SKU5 similar 5 0.78 0.29 -0.31
46 AT1G16740 Ribosomal protein L20 0.78 0.32 -0.31
47 AT5G11340 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.78 0.34 -0.31
48 AT2G19680 Mitochondrial ATP synthase subunit G protein 0.78 0.33 -0.31
49 AT4G15850 RNA helicase 1 RNA helicase 1, RNA helicase 1 0.78 0.3 -0.32
50 AT3G62810 complex 1 family protein / LVR family protein 0.78 0.33 -0.32
51 AT2G40330 PYR1-like 6 PYR1-like 6, regulatory components
of ABA receptor 9		 0.78 0.33 -0.32
52 AT1G79390 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.78 0.34 -0.31
53 AT1G53645 hydroxyproline-rich glycoprotein family protein 0.78 0.3 -0.32
54 AT1G14210 Ribonuclease T2 family protein 0.78 0.32 -0.33
55 AT5G27395 Mitochondrial inner membrane translocase complex, subunit
Tim44-related protein		 0.78 0.32 -0.32
56 AT1G53240 Lactate/malate dehydrogenase family protein mitochondrial malate dehydrogenase
1		 0.78 0.33 -0.31
57 AT5G15090 voltage dependent anion channel 3 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 3, voltage
dependent anion channel 3		 0.77 0.32 -0.3
58 AT5G59880 actin depolymerizing factor 3 actin depolymerizing factor 3 0.77 0.31 -0.31
59 AT4G22930 pyrimidin 4 DIHYDROOROTASE, pyrimidin 4 0.77 0.33 -0.32
60 AT3G53110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 LOW EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 4		 0.77 0.35 -0.31
61 AT3G19130 RNA-binding protein 47B RNA-binding protein 47B,
RNA-binding protein 47B		 0.77 0.31 -0.31
62 AT2G19480 nucleosome assembly protein 1;2 nucleosome assembly protein 1;2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 2		 0.77 0.33 -0.31
63 AT5G18280 apyrase 2 apyrase 2, apyrase 2 0.77 0.31 -0.32
64 AT5G65270 RAB GTPase homolog A4A RAB GTPase homolog A4A, RAB GTPase
homolog A4A		 0.77 0.32 -0.31
65 AT1G73180 Eukaryotic translation initiation factor eIF2A family
protein		 0.76 0.29 -0.31
66 AT2G29530 Tim10/DDP family zinc finger protein TIM10 0.76 0.29 -0.31
67 AT1G19360 Nucleotide-diphospho-sugar transferase family protein reduced residual arabinose 3 0.76 0.33 -0.31
68 AT3G23990 heat shock protein 60 heat shock protein 60, HEAT SHOCK
PROTEIN 60-3B		 0.76 0.32 -0.33
69 AT2G47380 Cytochrome c oxidase subunit Vc family protein 0.76 0.32 -0.33
70 AT2G20940 Protein of unknown function (DUF1279) 0.76 0.32 -0.32
71 AT4G01660 ABC transporter 1 ABC transporter 1, ABC transporter
1, ATATH10		 0.76 0.3 -0.3
72 AT1G62380 ACC oxidase 2 ACC oxidase 2, ATACO2 0.76 0.33 -0.31
73 AT4G37830 cytochrome c oxidase-related 0.76 0.32 -0.31
74 AT1G15120 Ubiquinol-cytochrome C reductase hinge protein 0.76 0.33 -0.32
75 AT1G09330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
integral to membrane; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF846, eukaryotic
(InterPro:IPR008564); Has 518 Blast hits to 518 proteins in
206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi
- 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107
(source: NCBI BLink).		 0.76 0.32 -0.32
76 AT2G04040 MATE efflux family protein ATDTX1, detoxification 1, TX1 0.75 0.33 -0.3
77 AT4G31180 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 0.75 0.32 -0.32
78 AT1G14060 GCK domain-containing protein 0.75 0.29 -0.32
79 AT5G16060 Cytochrome c oxidase biogenesis protein Cmc1-like 0.75 0.32 -0.31
80 AT3G20510 Transmembrane proteins 14C 0.75 0.32 -0.34
81 AT3G02190 Ribosomal protein L39 family protein 0.75 0.32 -0.32
82 AT3G11800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.75 0.3 -0.29
83 AT3G08640 Protein of unknown function (DUF3411) 0.75 0.34 -0.33
84 AT4G12470 azelaic acid induced 1 azelaic acid induced 1 0.75 0.3 -0.31
85 AT3G04120 glyceraldehyde-3-phosphate dehydrogenase C subunit 1 GLYCERALDEHYDE-3-PHOSPHATE
DEHYDROGENASE C SUBUNIT, GAPC-1,
glyceraldehyde-3-phosphate
dehydrogenase C subunit 1		 0.75 0.32 -0.28
86 AT5G14040 phosphate transporter 3;1 phosphate transporter 3;1 0.75 0.31 -0.3
87 AT4G19210 RNAse l inhibitor protein 2 ATP-binding cassette E2,
ARABIDOPSIS THALIANA RNASE L
INHIBITOR PROTEIN 2, RNAse l
inhibitor protein 2		 0.75 0.32 -0.32
88 AT5G14105 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.75 0.31 -0.33
89 AT1G56330 secretion-associated RAS 1B SECRETION-ASSOCIATED RAS 1,
secretion-associated RAS 1B,
ARABIDOPSIS THALIANA
SECRETION-ASSOCIATED RAS 1B,
SECRETION-ASSOCIATED RAS 1,
secretion-associated RAS 1B		 0.75 0.32 -0.32
90 AT5G13500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G25265.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.75 0.31 -0.32
91 AT4G37660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.75 0.31 -0.3
92 AT3G02090 Insulinase (Peptidase family M16) protein MPPBETA 0.74 0.32 -0.32
93 AT2G42710 Ribosomal protein L1p/L10e family 0.74 0.32 -0.32
94 AT3G20330 PYRIMIDINE B PYRIMIDINE B 0.74 0.33 -0.32
95 AT4G26970 aconitase 2 aconitase 2 0.74 0.3 -0.32
96 AT2G42910 Phosphoribosyltransferase family protein 0.74 0.35 -0.31
97 AT1G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits
to 40 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.31 -0.3
98 AT4G39820 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.31 -0.34
99 AT1G24095 Putative thiol-disulphide oxidoreductase DCC 0.74 0.32 -0.31
100 AT1G27435 unknown protein; Has 16 Blast hits to 16 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.3 -0.31
101 AT4G05440 temperature sensing protein-related embryo sac development arrest 35 0.74 0.31 -0.33
102 AT3G18760 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.74 0.35 -0.33
103 AT4G38920 vacuolar-type H(+)-ATPase C3 vacuolar-type H(+)-ATPase C3,
AVA-P3, vacuolar-type H(+)-ATPase
C3		 0.74 0.32 -0.33
104 AT2G45790 phosphomannomutase PHOSPHOMANNOMUTASE,
phosphomannomutase		 0.74 0.32 -0.33
105 AT2G46170 Reticulon family protein 0.74 0.32 -0.34
106 AT5G19980 golgi nucleotide sugar transporter 4 golgi nucleotide sugar transporter
4		 0.74 0.33 -0.32
107 AT2G31060 elongation factor family protein EMBRYO DEFECTIVE 2785 0.74 0.31 -0.31
108 AT5G51440 HSP20-like chaperones superfamily protein 0.74 0.31 -0.32
109 AT3G51830 SAC domain-containing protein 8 ATG5, SAC domain-containing
protein 8		 -0.73 0.32 -0.33
110 AT5G63700 zinc ion binding;DNA binding -0.73 0.31 -0.33
111 AT1G60590 Pectin lyase-like superfamily protein -0.71 0.31 -0.31
112 AT5G25280 serine-rich protein-related -0.71 0.31 -0.3
113 AT2G18440 GUT15 (GENE WITH UNSTABLE TRANSCRIPT 15); other RNA GENE WITH UNSTABLE TRANSCRIPT 15 -0.7 0.33 -0.31
114 AT1G59620 Disease resistance protein (CC-NBS-LRR class) family CW9 -0.69 0.3 -0.32
115 AT2G19810 CCCH-type zinc finger family protein AtOZF1, Oxidation-related Zinc
Finger 1		 -0.69 0.32 -0.31
116 AT1G19330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits
to 145 proteins in 43 species: Archae - 0; Bacteria - 0;
Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.69 0.32 -0.3
117 AT4G27180 kinesin 2 kinesin 2, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA B		 -0.68 0.34 -0.28
118 AT1G19715 Mannose-binding lectin superfamily protein -0.68 0.32 -0.32
119 AT3G45900 Ribonuclease P protein subunit P38-related -0.68 0.33 -0.31
120 AT4G08980 F-BOX WITH WD-40 2 F-BOX WITH WD-40 2 -0.68 0.32 -0.29
121 AT1G67530 ARM repeat superfamily protein -0.67 0.33 -0.33
122 AT2G16390 SNF2 domain-containing protein / helicase domain-containing
protein		 CHR35, DEFECTIVE IN MERISTEM
SILENCING 1, DEFECTIVE IN
RNA-DIRECTED DNA METHYLATION 1		 -0.65 0.33 -0.32
123 AT1G18810 phytochrome kinase substrate-related -0.65 0.31 -0.3
124 AT5G62470 myb domain protein 96 MYB DOMAIN PROTEIN 96, myb domain
protein 96, MYBCOV1		 -0.65 0.32 -0.31
125 AT3G25670 Leucine-rich repeat (LRR) family protein -0.65 0.33 -0.32
126 AT1G22710 sucrose-proton symporter 2 ARABIDOPSIS THALIANA
SUCROSE-PROTON SYMPORTER 2,
sucrose-proton symporter 2,
SUCROSE TRANSPORTER 1		 -0.65 0.31 -0.31
127 AT5G57100 Nucleotide/sugar transporter family protein -0.64 0.32 -0.3
128 AT5G44030 cellulose synthase A4 cellulose synthase A4, IRREGULAR
XYLEM 5, NWS2		 -0.64 0.31 -0.33
129 AT1G33400 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 9 -0.64 0.31 -0.31
130 AT1G53170 ethylene response factor 8 ATERF-8, ETHYLENE RESPONSE ELEMENT
BINDING FACTOR 4, ethylene
response factor 8		 -0.64 0.33 -0.32
131 AT5G58720 smr (Small MutS Related) domain-containing protein -0.64 0.32 -0.31
132 AT2G45340 Leucine-rich repeat protein kinase family protein -0.64 0.29 -0.33
133 AT5G08430 SWIB/MDM2 domain;Plus-3;GYF -0.63 0.33 -0.33
134 AT3G23160 Protein of unknown function (DUF668) -0.63 0.33 -0.32
135 AT3G30300 O-fucosyltransferase family protein -0.63 0.29 -0.31
136 AT4G24800 MA3 domain-containing protein EIN2 C-terminus Interacting
Protein 1		 -0.63 0.32 -0.3
137 AT4G01950 glycerol-3-phosphate acyltransferase 3 ATGPAT3, glycerol-3-phosphate
acyltransferase 3		 -0.63 0.31 -0.31
138 AT3G15095 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 9762 Blast hits to 6439
proteins in 764 species: Archae - 77; Bacteria - 1339;
Metazoa - 3211; Fungi - 718; Plants - 437; Viruses - 131;
Other Eukaryotes - 3849 (source: NCBI BLink).		 high chlorophyll fluorescence 243 -0.63 0.32 -0.3
139 AT1G15340 methyl-CPG-binding domain 10 methyl-CPG-binding domain 10 -0.63 0.32 -0.3
140 AT1G69910 Protein kinase superfamily protein -0.61 0.31 -0.32
141 AT4G35560 Transducin/WD40 repeat-like superfamily protein DUO1-activated WD40 1 -0.61 0.32 -0.32
142 AT3G51950 Zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 -0.61 0.29 -0.31
143 AT3G53540 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF3741)
(TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in
206 species: Archae - 2; Bacteria - 409; Metazoa - 304;
Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes -
485 (source: NCBI BLink).		 -0.61 0.33 -0.29
144 AT1G21060 Protein of unknown function, DUF547 -0.61 0.33 -0.3
145 AT3G01960 unknown protein; Has 13 Blast hits to 13 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.3 -0.31
146 AT5G40910 Disease resistance protein (TIR-NBS-LRR class) family -0.6 0.3 -0.31
147 AT5G52230 methyl-CPG-binding domain protein 13 methyl-CPG-binding domain protein
13		 -0.6 0.3 -0.31
148 AT2G20210 RNI-like superfamily protein -0.6 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
149 C0167 MST_1744.8 - - - -0.81 0.47 -0.45
150 C0266 Xylose D-Xylose D-Xylose xylose degradation I -0.8 0.44 -0.45 C0266
151 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis -0.77 0.46 -0.47 C0003
152 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		-0.77 0.43 -0.47 C0109