AT3G09160 : -
Query Information
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AGICode AT3G09160
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G09160 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.31 -0.34
2 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein 0.69 0.31 -0.3
3 AT3G26085 CAAX amino terminal protease family protein 0.68 0.31 -0.3
4 AT2G13370 chromatin remodeling 5 chromatin remodeling 5 0.68 0.3 -0.32
5 AT4G18130 phytochrome E phytochrome E 0.67 0.32 -0.32
6 AT1G21700 SWITCH/sucrose nonfermenting 3C SWITCH/sucrose nonfermenting 3C,
CHB4, SWITCH/sucrose nonfermenting
3C		 0.65 0.31 -0.32
7 AT1G79280 nuclear pore anchor TRANSLOCATED PROMOTER REGION,
nuclear pore anchor		 0.64 0.36 -0.29
8 AT5G62810 peroxin 14 ATPEX14, PEROXISOME DEFECTIVE 2,
peroxin 14		 0.64 0.3 -0.31
9 AT5G09410 ethylene induced calmodulin binding protein calmodulin-binding transcription
activator 1, ethylene induced
calmodulin binding protein		 0.63 0.31 -0.31
10 AT3G43220 Phosphoinositide phosphatase family protein 0.62 0.29 -0.33
11 AT2G20830 transferases;folic acid binding 0.61 0.31 -0.32
12 AT3G05370 receptor like protein 31 receptor like protein 31, receptor
like protein 31		 0.61 0.33 -0.31
13 AT5G02770 unknown protein; Has 469 Blast hits to 336 proteins in 126
species: Archae - 0; Bacteria - 54; Metazoa - 249; Fungi -
22; Plants - 47; Viruses - 0; Other Eukaryotes - 97
(source: NCBI BLink).		 modifier of snc1, 11 0.61 0.3 -0.31
14 AT1G06070 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.6 0.32 -0.33
15 AT4G34140 D111/G-patch domain-containing protein 0.6 0.33 -0.33
16 AT5G44750 DNA-directed DNA polymerases ARABIDOPSIS THALIANA HOMOLOG OF
REVERSIONLESS 1, REV1		 0.59 0.32 -0.28
17 AT5G24670 Cytidine/deoxycytidylate deaminase family protein EMBRYO DEFECTIVE 2820, tRNA
adenosine deaminase 3		 0.59 0.31 -0.33
18 AT1G17260 autoinhibited H(+)-ATPase isoform 10 autoinhibited H(+)-ATPase isoform
10		 0.59 0.29 -0.3
19 AT1G71490 Tetratricopeptide repeat (TPR)-like superfamily protein 0.58 0.29 -0.3
20 AT1G80290 Nucleotide-diphospho-sugar transferases superfamily protein -0.58 0.31 -0.33
21 AT2G30810 Gibberellin-regulated family protein 0.58 0.32 -0.3
22 AT1G68420 Class II aaRS and biotin synthetases superfamily protein 0.58 0.3 -0.32
23 AT2G23740 nucleic acid binding;sequence-specific DNA binding
transcription factors;zinc ion binding		 0.58 0.31 -0.32
24 AT3G29760 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.58 0.31 -0.32
25 AT5G55100 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 0.57 0.31 -0.34
26 AT3G32040 Terpenoid synthases superfamily protein -0.56 0.28 -0.36
27 AT1G65950 Protein kinase superfamily protein 0.56 0.32 -0.31
28 AT3G51150 ATP binding microtubule motor family protein 0.56 0.3 -0.31
29 AT3G08730 protein-serine kinase 1 ARABIDOPSIS THALIANA
PROTEIN-SERINE KINASE 1,
ARABIDOPSIS THALIANA
PROTEIN-SERINE KINASE 6, ATS6K1,
protein-serine kinase 1,
ROTEIN-SERINE KINASE 6, P70
RIBOSOMAL S6 KINASE		 0.56 0.33 -0.31
30 AT2G34870 hydroxyproline-rich glycoprotein family protein maternal effect embryo arrest 26 -0.56 0.3 -0.33
31 AT3G08000 RNA-binding (RRM/RBD/RNP motifs) family protein 0.56 0.32 -0.32
32 AT1G64130 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.55 0.32 -0.32
33 AT2G42270 U5 small nuclear ribonucleoprotein helicase 0.55 0.31 -0.33
34 AT1G35890 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.54 0.34 -0.3
35 AT4G36690 U2 snRNP auxilliary factor, large subunit, splicing factor ATU2AF65A 0.54 0.33 -0.3
36 AT1G13630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.54 0.3 -0.33
37 AT1G08500 early nodulin-like protein 18 AtENODL18, early nodulin-like
protein 18		 -0.54 0.34 -0.34
38 AT5G48230 acetoacetyl-CoA thiolase 2 acetoacetyl-CoA thiolase 2, EMBRYO
DEFECTIVE 1276		 -0.54 0.31 -0.31
39 AT3G01020 ISCU-like 2 ISCU-LIKE 2, ISCU-like 2 -0.54 0.32 -0.33
40 AT1G23590 Domain of unknown function DUF220 -0.53 0.31 -0.33
41 AT2G28460 Cysteine/Histidine-rich C1 domain family protein -0.53 0.32 -0.3
42 AT1G07190 BEST Arabidopsis thaliana protein match is: lon protease 1
(TAIR:AT5G26860.1); Has 106 Blast hits to 106 proteins in
47 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi -
11; Plants - 56; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.52 0.29 -0.3
43 AT3G43290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: in 8 processes; LOCATED IN: cellular_component
unknown; EXPRESSED IN: leaf; EXPRESSED DURING: LP.10 ten
leaves visible; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.34 -0.32
44 AT3G50300 HXXXD-type acyl-transferase family protein -0.52 0.32 -0.29
45 AT3G12100 Cation efflux family protein 0.52 0.31 -0.32
46 AT4G00020 BREAST CANCER 2 like 2A BREAST CANCER 2 like 2A, BRCA2A,
EMBRYO SAC DEVELOPMENT ARREST 20,
MATERNAL EFFECT EMBRYO ARREST 43		 0.51 0.33 -0.3
47 AT5G04030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: egg cell; Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.51 0.31 -0.31
48 AT1G43930 transposable element gene -0.51 0.3 -0.31
49 AT1G34190 NAC domain containing protein 17 NAC domain containing protein 17,
NAC domain containing protein 17		 -0.5 0.32 -0.32
50 AT5G04650 transposable element gene 0.5 0.31 -0.33
51 AT2G02650 Ribonuclease H-like superfamily protein -0.5 0.31 -0.32
52 AT3G12060 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 1 -0.49 0.35 -0.31
53 AT5G57480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.49 0.3 -0.3
54 AT1G33340 ENTH/ANTH/VHS superfamily protein -0.49 0.3 -0.31
55 AT4G11210 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.48 0.32 -0.32
56 AT1G05290 CCT motif family protein -0.48 0.33 -0.31
57 AT4G31930 Mitochondrial glycoprotein family protein -0.47 0.31 -0.31
58 AT2G14300 transposable element gene -0.45 0.33 -0.31
59 AT3G11920 glutaredoxin-related -0.44 0.32 -0.3
60 AT1G76140 Prolyl oligopeptidase family protein -0.44 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
61 C0235 Sinapoyl malate Sinapoyl-(S)-malate Sinapoyl-(S)-malate sinapate ester biosynthesis 0.56 0.32 -0.32 C0235
62 C0232 Shikimic acid - Shikimate phenylpropanoid biosynthesis,
chorismate biosynthesis,
simple coumarins biosynthesis 		0.52 0.31 -0.32 C0232