AT3G03580 : -
Query Information
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AGICode AT3G03580
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G03580 Tetratricopeptide repeat (TPR)-like superfamily protein 1 0.31 -0.33
2 AT3G23820 UDP-D-glucuronate 4-epimerase 6 UDP-D-glucuronate 4-epimerase 6 0.72 0.33 -0.33
3 AT2G33570 Domain of unknown function (DUF23) 0.7 0.31 -0.31
4 AT2G28180 Cation/hydrogen exchanger family protein ATCHX8, CHX08, CATION/H+ EXCHANGER
8		 0.68 0.32 -0.32
5 AT5G44280 RING 1A ARABIDOPSIS THALIANA RING 1A, RING
1A		 0.67 0.32 -0.32
6 AT3G43310 pseudogene, hypothetical protein, hypothetical protein
At2g15420 - Arabidopsis thaliana, EMBL:AC006920		 0.67 0.32 -0.32
7 AT5G13270 Pentatricopeptide repeat (PPR) superfamily protein REQUIRED FOR ACCD RNA EDITING 1 0.66 0.34 -0.32
8 AT3G58060 Cation efflux family protein 0.65 0.33 -0.32
9 AT4G17020 transcription factor-related -0.65 0.33 -0.32
10 AT4G25610 C2H2-like zinc finger protein 0.65 0.31 -0.31
11 AT4G39380 BEST Arabidopsis thaliana protein match is: TSL-kinase
interacting protein 1 (TAIR:AT2G36960.3); Has 80 Blast hits
to 74 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.64 0.32 -0.32
12 AT5G61920 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G67170.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.64 0.29 -0.3
13 AT5G59130 Subtilase family protein 0.64 0.33 -0.31
14 AT1G20920 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.64 0.34 -0.32
15 AT5G49310 importin alpha isoform 5 importin alpha isoform 5 0.64 0.32 -0.31
16 AT2G10870 transposable element gene 0.64 0.29 -0.31
17 AT2G42940 Predicted AT-hook DNA-binding family protein 0.64 0.32 -0.32
18 AT2G15510 transposable element gene 0.63 0.32 -0.33
19 AT4G35670 Pectin lyase-like superfamily protein 0.62 0.33 -0.31
20 AT3G33064 transposable element gene 0.62 0.32 -0.3
21 AT2G24830 zinc finger (CCCH-type) family protein / D111/G-patch
domain-containing protein		 -0.62 0.34 -0.31
22 AT4G32410 cellulose synthase 1 CELLULOSE SYNTHASE 1, cellulose
synthase 1, RADIALLY SWOLLEN 1		 0.61 0.32 -0.32
23 AT2G15240 UNC-50 family protein -0.61 0.3 -0.34
24 AT3G23130 C2H2 and C2HC zinc fingers superfamily protein FLORAL DEFECTIVE 10, FLORAL ORGAN
NUMBER 1, SUPERMAN		 -0.61 0.31 -0.33
25 AT4G33710 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.61 0.31 -0.31
26 AT4G19670 RING/U-box superfamily protein -0.61 0.35 -0.32
27 AT4G28560 ROP-interactive CRIB motif-containing protein 7 ROP-interactive CRIB
motif-containing protein 7		 0.61 0.32 -0.33
28 AT2G22350 transposable element gene 0.61 0.32 -0.3
29 AT3G59440 Calcium-binding EF-hand family protein 0.61 0.29 -0.32
30 AT1G43840 transposable element gene 0.61 0.3 -0.33
31 AT1G25375 Metallo-hydrolase/oxidoreductase superfamily protein -0.61 0.31 -0.34
32 AT5G02730 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.6 0.33 -0.32
33 AT2G33760 Pentatricopeptide repeat (PPR) superfamily protein 0.6 0.34 -0.32
34 AT3G11760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.32 -0.32
35 AT3G07610 Transcription factor jumonji (jmjC) domain-containing
protein		 increase in bonsai methylation 1 0.6 0.32 -0.33
36 AT2G22160 Cysteine proteinases superfamily protein -0.6 0.31 -0.3
37 AT4G29980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: leaf whorl, sepal, flower, seed;
EXPRESSED DURING: petal differentiation and expansion
stage, E expanded cotyledon stage; BEST Arabidopsis
thaliana protein match is: Fasciclin-like arabinogalactan
family protein (TAIR:AT1G30800.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.6 0.33 -0.33
38 AT1G73710 Pentatricopeptide repeat (PPR) superfamily protein 0.6 0.32 -0.31
39 AT2G03840 tetraspanin13 tetraspanin13 0.59 0.31 -0.32
40 AT3G63480 ATP binding microtubule motor family protein -0.59 0.31 -0.34
41 AT2G41250 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.59 0.3 -0.32
42 AT3G14340 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.31 -0.3
43 AT5G04290 kow domain-containing transcription factor 1 kow domain-containing
transcription factor 1, SPT5-LIKE		 0.58 0.33 -0.31
44 AT3G19050 phragmoplast orienting kinesin 2 phragmoplast orienting kinesin 2 -0.58 0.34 -0.3
45 AT3G25210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.58 0.31 -0.33
46 AT5G28240 transposable element gene 0.58 0.3 -0.28
47 AT5G65180 ENTH/VHS family protein 0.58 0.31 -0.3
48 AT1G31430 Pentatricopeptide repeat (PPR-like) superfamily protein 0.58 0.31 -0.32
49 AT1G30460 cleavage and polyadenylation specificity factor 30 ARABIDOPSIS THALIANA CLEAVAGE AND
POLYADENYLATION SPECIFICITY FACTOR
30, cleavage and polyadenylation
specificity factor 30		 0.58 0.29 -0.3
50 AT4G07530 transposable element gene 0.57 0.33 -0.29
51 AT3G28170 unknown protein; Has 2 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.32 -0.32
52 AT2G17490 transposable element gene -0.57 0.31 -0.29
53 AT5G56610 Phosphotyrosine protein phosphatases superfamily protein -0.57 0.31 -0.32
54 AT5G55130 co-factor for nitrate, reductase and xanthine dehydrogenase
5		 co-factor for nitrate, reductase
and xanthine dehydrogenase 5,
SIRTINOL RESISTANT 1		 -0.57 0.29 -0.3
55 AT2G17640 Trimeric LpxA-like enzymes superfamily protein ATSERAT3;1, SERINE
ACETYLTRANSFERASE 106		 -0.57 0.29 -0.33
56 AT4G09080 Outer membrane OMP85 family protein TRANSLOCON OUTER MEMBRANE COMPLEX
75-IV, translocon at the outer
envelope membrane of chloroplasts
75-IV		 0.57 0.33 -0.32
57 AT3G55590 Glucose-1-phosphate adenylyltransferase family protein -0.57 0.32 -0.32
58 AT4G00130 DNA-binding storekeeper protein-related transcriptional
regulator		 0.57 0.31 -0.31
59 AT3G42360 transposable element gene 0.57 0.33 -0.3
60 AT1G64960 ARM repeat superfamily protein hypersensitive to excess boron 1 0.57 0.31 -0.31
61 AT4G04320 malonyl-CoA decarboxylase family protein -0.56 0.31 -0.31
62 AT2G41120 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF309
(InterPro:IPR005500); Has 349 Blast hits to 349 proteins in
112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi
- 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127
(source: NCBI BLink).		 -0.56 0.32 -0.3
63 AT1G65740 Protein of unknown function (DUF295) UPWARD CURLY LEAF1 0.56 0.33 -0.3
64 AT5G13930 Chalcone and stilbene synthase family protein ATCHS, CHALCONE SYNTHASE,
TRANSPARENT TESTA 4		 0.56 0.32 -0.3
65 AT1G72580 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.32 -0.32
66 AT5G02030 POX (plant homeobox) family protein BEL1-LIKE HOMEODOMAIN 9,
BELLRINGER, HB-6, LARSON,
PENNYWISE, REPLUMLESS, VAAMANA		 0.56 0.32 -0.3
67 AT4G32300 S-domain-2 5 S-domain-2 5 0.56 0.32 -0.3
68 AT3G42980 transposable element gene 0.56 0.3 -0.28
69 AT4G36510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.3 -0.33
70 ATMG00140 hypothetical protein ORF167 -0.55 0.31 -0.3
71 AT5G58780 Undecaprenyl pyrophosphate synthetase family protein 0.55 0.3 -0.31
72 AT1G69660 TRAF-like family protein 0.55 0.32 -0.31
73 AT5G38580 FBD-like domain family protein -0.54 0.32 -0.32
74 AT4G15310 cytochrome P450, family 702, subfamily A, polypeptide 3 cytochrome P450, family 702,
subfamily A, polypeptide 3		 -0.54 0.3 -0.31
75 AT2G42040 CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has
219 Blast hits to 219 proteins in 19 species: Archae - 0;
Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 -0.54 0.31 -0.3
76 AT4G21090 MITOCHONDRIAL FERREDOXIN 2 ARABIDOPSIS MITOCHONDRIAL
FERREDOXIN 2, MITOCHONDRIAL
FERREDOXIN 2		 -0.54 0.31 -0.32
77 AT5G09690 magnesium transporter 7 ARABIDOPSIS THALIANA MAGNESIUM
TRANSPORTER 7, magnesium
transporter 7, MRS2-7		 -0.54 0.3 -0.33
78 AT5G46150 LEM3 (ligand-effect modulator 3) family protein / CDC50
family protein		 -0.53 0.32 -0.33
79 AT3G02980 MEIOTIC CONTROL OF CROSSOVERS1 MEIOTIC CONTROL OF CROSSOVERS1 -0.53 0.31 -0.33
80 AT4G18400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.53 0.3 -0.33
81 AT5G11910 alpha/beta-Hydrolases superfamily protein -0.53 0.33 -0.34
82 AT2G25380 pseudogene of zinc finger protein-related -0.53 0.32 -0.31
83 AT4G15755 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.52 0.3 -0.33
84 AT4G01190 phosphatidylinositol phosphate kinase 10 phosphatidylinositol phosphate
kinase 10, phosphatidylinositol
phosphate kinase 10		 -0.52 0.32 -0.31
85 AT2G14170 aldehyde dehydrogenase 6B2 aldehyde dehydrogenase 6B2 -0.52 0.32 -0.33
86 AT2G44420 protein N-terminal asparagine amidohydrolase family protein -0.52 0.33 -0.32
87 AT2G29250 Concanavalin A-like lectin protein kinase family protein -0.52 0.32 -0.32
88 AT3G44560 fatty acid reductase 8 fatty acid reductase 8 -0.51 0.31 -0.34
89 AT1G66930 Protein kinase superfamily protein -0.51 0.31 -0.33
90 AT5G28670 transposable element gene -0.51 0.32 -0.29
91 AT2G39090 tetratricopeptide repeat (TPR)-containing protein anaphase-promoting complex 7,
AtAPC7		 -0.51 0.32 -0.31
92 AT1G55960 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.5 0.33 -0.32
93 AT5G10270 cyclin-dependent kinase C;1 cyclin-dependent kinase C;1 -0.5 0.3 -0.31
94 AT2G45040 Matrixin family protein -0.5 0.3 -0.32
95 AT1G54170 CTC-interacting domain 3 CTC-interacting domain 3 -0.5 0.3 -0.31
96 AT5G19200 NAD(P)-binding Rossmann-fold superfamily protein TSC10B -0.5 0.3 -0.32
97 AT3G16750 unknown protein; Has 4708 Blast hits to 1416 proteins in
195 species: Archae - 36; Bacteria - 1240; Metazoa - 1232;
Fungi - 406; Plants - 191; Viruses - 23; Other Eukaryotes -
1580 (source: NCBI BLink).		 -0.5 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0173 MST_2301.7 - - - 0.78 0.42 -0.46
99 C0072 Cyanidin 3-O-[2''-O-(xylosyl) glucoside] 5-O-glucoside - - - 0.78 0.46 -0.42
100 C0199 Phosphatidylethanolamine-36:6 - Phosphatidylethanolamine-36:6 phospholipid biosynthesis II,
linoleate biosynthesis I,
phosphatidylethanolamine biosynthesis I,
phosphatidylethanolamine biosynthesis II,
glutathione redox reactions I 		0.73 0.49 -0.48 C0199
101 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		0.72 0.44 -0.46 C0012
102 C0162 MST_1588.3 - - - -0.71 0.46 -0.45
103 C0159 MST_1505.6 - - - -0.69 0.41 -0.44
104 C0251 Sulfoquinovosyldiacylglycerol-36:6 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis 0.69 0.5 -0.49 C0251
105 C0085 Digalactosyldiacylglycerol-36:6 - Digalactosyldiacylglycerol-36:6 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.68 0.5 -0.47 C0085
106 C0077 Digalactosyldiacylglycerol-34:2 - Digalactosyldiacylglycerol-34:2 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.63 0.33 -0.33
107 C0130 Kaempferol-3-O-α-rhamnopyranosyl(1,2)-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-α-L-rhamnopyranosyl(1,2)-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside - 0.63 0.45 -0.47
108 C0078 Digalactosyldiacylglycerol-34:3 - Digalactosyldiacylglycerol-34:3 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.63 0.32 -0.31
109 C0205 Phosphatidylglycerol-34:3 - Phosphatidylglycerol-34:3 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		0.62 0.34 -0.33
110 C0195 Phenylpyruvic acid - Phenylpyruvate phenylalanine degradation III -0.61 0.43 -0.47 C0195
111 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		-0.59 0.44 -0.46 C0262
112 C0157 Monogalactosyldiacylgycerol-36:6 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		0.59 0.33 -0.32
113 C0206 Phosphatidylglycerol-34:4 - Phosphatidylglycerol-34:4 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		0.57 0.36 -0.33
114 C0113 Histidinol - Histidinol histidine biosynthesis -0.56 0.3 -0.3 C0113
115 C0246 Sulfoquinovosyldiacylglycerol-34:2 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis 0.55 0.34 -0.31 C0246
116 C0069 Citrulline - Citrulline citrulline-nitric oxide cycle,
citrulline biosynthesis,
nitric oxide biosynthesis I (in plants),
urea cycle,
citrulline degradation,
arginine biosynthesis II (acetyl cycle),
arginine biosynthesis I 		-0.5 0.33 -0.31 C0069