AT3G11380 : -
Query Information
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AGICode AT3G11380
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G11380 Pentatricopeptide repeat (PPR) superfamily protein 1 0.33 -0.3
2 AT5G27190 transposable element gene 0.74 0.31 -0.32
3 AT3G42320 transposable element gene 0.73 0.3 -0.32
4 AT5G29070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion; BEST
Arabidopsis thaliana protein match is: zinc ion
binding;nucleic acid binding (TAIR:AT4G06479.1); Has 5
Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.29 -0.34
5 AT2G40440 BTB/POZ domain-containing protein 0.69 0.3 -0.28
6 AT1G64500 Glutaredoxin family protein 0.69 0.33 -0.31
7 AT1G74080 myb domain protein 122 MYB DOMAIN PROTEIN 122, myb domain
protein 122		 -0.68 0.3 -0.3
8 AT2G42410 zinc finger protein 11 ZINC FINGER PROTEIN 11, zinc
finger protein 11		 0.68 0.3 -0.33
9 AT4G26280 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.68 0.31 -0.32
10 AT3G13062 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.68 0.3 -0.33
11 AT2G37550 ARF-GAP domain 7 ARF-GAP domain 7, yeast pde1
suppressor 1		 -0.67 0.33 -0.3
12 AT3G17100 sequence-specific DNA binding transcription factors -0.67 0.29 -0.32
13 AT1G53840 pectin methylesterase 1 pectin methylesterase 1, pectin
methylesterase 1		 -0.67 0.32 -0.29
14 AT1G02050 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 6 0.67 0.33 -0.34
15 AT3G14070 cation exchanger 9 CATION CALCIUM EXCHANGER 3, cation
exchanger 9, CATION CALCIUM
EXCHANGER 3		 -0.67 0.3 -0.3
16 AT1G42420 transposable element gene -0.67 0.3 -0.31
17 AT3G20080 cytochrome P450, family 705, subfamily A, polypeptide 15 cytochrome P450, family 705,
subfamily A, polypeptide 15		 -0.66 0.32 -0.31
18 AT3G53600 C2H2-type zinc finger family protein -0.66 0.31 -0.3
19 AT3G49510 F-box family protein -0.66 0.34 -0.33
20 AT2G10900 transposable element gene 0.66 0.33 -0.33
21 AT3G54490 RNA polymerase II fifth largest subunit, E RNA polymerase II fifth largest
subunit, E		 0.65 0.32 -0.33
22 AT5G24340 3'-5' exonuclease domain-containing protein 0.65 0.3 -0.35
23 AT1G78320 glutathione S-transferase TAU 23 glutathione S-transferase TAU 23,
glutathione S-transferase TAU 23		 0.65 0.32 -0.32
24 AT5G51930 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 0.65 0.33 -0.31
25 AT1G64930 cytochrome P450, family 87, subfamily A, polypeptide 7 cytochrome P450, family 87,
subfamily A, polypeptide 7		 -0.65 0.3 -0.32
26 AT3G30570 transposable element gene 0.65 0.31 -0.34
27 AT3G25050 xyloglucan endotransglucosylase/hydrolase 3 xyloglucan
endotransglucosylase/hydrolase 3		 0.64 0.34 -0.32
28 AT1G10730 Clathrin adaptor complexes medium subunit family protein -0.64 0.3 -0.32
29 AT3G01990 ACT domain repeat 6 ACT domain repeat 6 -0.64 0.33 -0.32
30 AT5G18990 Pectin lyase-like superfamily protein 0.64 0.33 -0.33
31 AT1G66180 Eukaryotic aspartyl protease family protein -0.64 0.31 -0.31
32 AT3G61350 SKP1 interacting partner 4 SKP1 interacting partner 4 -0.64 0.33 -0.33
33 AT1G67770 terminal EAR1-like 2 terminal EAR1-like 2 0.64 0.3 -0.33
34 AT1G60570 Galactose oxidase/kelch repeat superfamily protein 0.64 0.31 -0.3
35 AT2G38360 prenylated RAB acceptor 1.B4 prenylated RAB acceptor 1.B4 -0.63 0.29 -0.32
36 AT3G13780 SMAD/FHA domain-containing protein -0.63 0.31 -0.32
37 AT1G18940 Nodulin-like / Major Facilitator Superfamily protein -0.63 0.31 -0.31
38 AT1G26300 BSD domain-containing protein -0.63 0.33 -0.31
39 AT2G19070 spermidine hydroxycinnamoyl transferase spermidine hydroxycinnamoyl
transferase		 0.63 0.33 -0.32
40 AT4G19780 transposable element gene 0.63 0.32 -0.31
41 AT2G15325 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.63 0.31 -0.33
42 AT1G38340 transposable element gene 0.63 0.33 -0.31
43 AT5G61920 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G67170.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.63 0.3 -0.33
44 AT4G37840 hexokinase-like 3 hexokinase-like 3 0.63 0.3 -0.3
45 AT1G04600 myosin XI A ATXIA, myosin XI A 0.63 0.32 -0.31
46 AT5G38580 FBD-like domain family protein 0.62 0.29 -0.31
47 AT2G03580 F-box family protein-related 0.62 0.33 -0.34
48 AT1G32180 cellulose synthase-like D6 cellulose synthase-like D6,
CELLULOSE SYNTHASE LIKE D6,
cellulose synthase-like D6		 0.62 0.31 -0.31
49 AT2G28180 Cation/hydrogen exchanger family protein ATCHX8, CHX08, CATION/H+ EXCHANGER
8		 -0.62 0.32 -0.32
50 AT2G40210 AGAMOUS-like 48 AGAMOUS-like 48 0.62 0.31 -0.3
51 AT4G10750 Phosphoenolpyruvate carboxylase family protein -0.62 0.32 -0.31
52 AT1G51990 O-methyltransferase family protein 0.62 0.31 -0.32
53 AT3G26880 Plant self-incompatibility protein S1 family 0.61 0.31 -0.32
54 AT1G04670 unknown protein; Has 40 Blast hits to 40 proteins in 14
species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2;
Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.31 -0.32
55 AT1G63020 nuclear RNA polymerase D1A NRPD1, nuclear RNA polymerase D1A,
NUCLEAR RNA POLYMERASE D 1A, SDE4,
SILENCING MOVEMENT DEFICIENT 2		 -0.61 0.3 -0.33
56 AT3G54520 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G54530.1); Has 72 Blast hits
to 70 proteins in 20 species: Archae - 0; Bacteria - 5;
Metazoa - 8; Fungi - 2; Plants - 18; Viruses - 0; Other
Eukaryotes - 39 (source: NCBI BLink).		 -0.61 0.31 -0.32
57 AT4G39500 cytochrome P450, family 96, subfamily A, polypeptide 11 cytochrome P450, family 96,
subfamily A, polypeptide 11		 -0.61 0.29 -0.34
58 AT1G52820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.61 0.33 -0.29
59 AT4G19620 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.32 -0.32
60 AT2G10920 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.3 -0.31
61 AT3G22220 hAT transposon superfamily -0.6 0.31 -0.3
62 AT1G63060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: petal, leaf whorl, male
gametophyte, flower; EXPRESSED DURING: L mature pollen
stage, M germinated pollen stage, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G07330.1); Has 42 Blast hits to 42 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.32 -0.31
63 AT1G11270 F-box and associated interaction domains-containing protein -0.6 0.31 -0.33
64 AT1G75720 Plant protein of unknown function (DUF827) 0.6 0.31 -0.3
65 AT1G55270 Galactose oxidase/kelch repeat superfamily protein 0.6 0.32 -0.3
66 AT2G33610 switch subunit 3 switch subunit 3, CHROMATIN
REMODELING COMPLEX SUBUNIT B,
switch subunit 3		 -0.6 0.3 -0.34
67 AT1G43940 transposable element gene -0.6 0.31 -0.31
68 AT1G43840 transposable element gene -0.6 0.32 -0.32
69 AT4G27550 trehalose-6-phosphatase synthase S4 ARABIDOPSIS THALIANA TREHALOSE
PHOSPHATASE/SYNTHASE 4,
trehalose-6-phosphatase synthase
S4		 0.6 0.32 -0.31
70 AT2G40990 DHHC-type zinc finger family protein 0.59 0.31 -0.32
71 AT4G01190 phosphatidylinositol phosphate kinase 10 phosphatidylinositol phosphate
kinase 10, phosphatidylinositol
phosphate kinase 10		 0.59 0.34 -0.31
72 AT3G18120 F-box associated ubiquitination effector family protein 0.59 0.32 -0.32
73 AT2G42980 Eukaryotic aspartyl protease family protein 0.59 0.31 -0.31
74 AT5G09280 Pectin lyase-like superfamily protein 0.59 0.32 -0.31
75 AT2G34370 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.31 -0.34
76 AT5G07550 glycine-rich protein 19 ATGRP19, glycine-rich protein 19 0.59 0.32 -0.31
77 AT1G30850 root hair specific 4 root hair specific 4 -0.59 0.33 -0.31
78 AT3G10620 nudix hydrolase homolog 26 nudix hydrolase homolog 26, nudix
hydrolase homolog 26		 -0.59 0.31 -0.29
79 AT1G61460 S-locus protein kinase, putative -0.59 0.32 -0.31
80 AT1G69100 Eukaryotic aspartyl protease family protein 0.59 0.32 -0.32
81 AT3G31360 transposable element gene 0.59 0.33 -0.3
82 AT3G44910 cation/H+ exchanger 12 ATCHX12, cation/H+ exchanger 12 0.59 0.29 -0.3
83 AT1G02450 NIM1-interacting 1 NIMIN-1, NIM1-interacting 1 0.58 0.32 -0.33
84 AT1G70650 Ran BP2/NZF zinc finger-like superfamily protein 0.58 0.34 -0.33
85 AT2G23400 Undecaprenyl pyrophosphate synthetase family protein 0.58 0.32 -0.3
86 AT5G38380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: membrane; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF6, transmembrane (InterPro:IPR000620); BEST
Arabidopsis thaliana protein match is: Cation efflux family
protein (TAIR:AT2G04620.1); Has 123 Blast hits to 121
proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa -
69; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes -
9 (source: NCBI BLink).		 -0.58 0.31 -0.31
87 AT2G19340 Oligosaccharyltransferase complex/magnesium transporter
family protein		 -0.58 0.29 -0.32
88 AT1G07460 Concanavalin A-like lectin family protein -0.58 0.33 -0.3
89 AT5G49110 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN:
cultured cell; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.58 0.31 -0.32
90 AT4G32105 Beta-1,3-N-Acetylglucosaminyltransferase family protein 0.58 0.34 -0.31
91 AT5G08170 porphyromonas-type peptidyl-arginine deiminase family
protein		 AGMATINE IMINOHYDROLASE, EMBRYO
DEFECTIVE 1873		 0.58 0.31 -0.35
92 AT2G36440 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.3 -0.31
93 AT3G43040 transposable element gene -0.58 0.31 -0.31
94 AT2G01660 plasmodesmata-located protein 6 plasmodesmata-located protein 6 0.58 0.32 -0.35
95 AT1G53820 RING/U-box superfamily protein 0.57 0.32 -0.3
96 AT1G33680 KH domain-containing protein -0.57 0.32 -0.31
97 AT2G14835 RING/U-box superfamily protein -0.57 0.3 -0.3
98 AT5G39640 Putative endonuclease or glycosyl hydrolase 0.57 0.29 -0.31
99 AT2G06310 transposable element gene -0.57 0.32 -0.32
100 AT2G46200 unknown protein; Has 2968 Blast hits to 2381 proteins in
310 species: Archae - 16; Bacteria - 188; Metazoa - 1070;
Fungi - 227; Plants - 145; Viruses - 4; Other Eukaryotes -
1318 (source: NCBI BLink).		 0.57 0.32 -0.3
101 AT5G37380 Chaperone DnaJ-domain superfamily protein -0.57 0.3 -0.31
102 AT4G19570 Chaperone DnaJ-domain superfamily protein 0.57 0.32 -0.33
103 AT4G16180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G28720.1); Has 5 Blast hits to 5
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 -0.57 0.31 -0.33
104 AT3G44830 Lecithin:cholesterol acyltransferase family protein -0.57 0.32 -0.3
105 AT3G52890 KCBP-interacting protein kinase KCBP-interacting protein kinase -0.57 0.29 -0.31
106 AT1G17520 Homeodomain-like/winged-helix DNA-binding family protein -0.57 0.31 -0.32
107 AT2G46480 galacturonosyltransferase 2 galacturonosyltransferase 2,
GALACTURONOSYLTRANSFERASE 2		 0.57 0.32 -0.31
108 AT3G24515 ubiquitin-conjugating enzyme 37 ubiquitin-conjugating enzyme 37 0.57 0.33 -0.34
109 AT5G17200 Pectin lyase-like superfamily protein 0.57 0.34 -0.31
110 AT1G27520 Glycosyl hydrolase family 47 protein 0.57 0.31 -0.31
111 AT5G07700 myb domain protein 76 myb domain protein 76, myb domain
protein 76		 0.57 0.31 -0.32
112 AT5G52870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G64080.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 MEMBRANE-ASSOCIATED KINASE
REGULATOR 5		 -0.56 0.32 -0.32
113 AT3G57850 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: embryo, synergid; EXPRESSED DURING: C
globular stage; BEST Arabidopsis thaliana protein match is:
Plant self-incompatibility protein S1 family
(TAIR:AT3G57840.1); Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.32 -0.29
114 AT1G31730 Adaptin family protein -0.56 0.3 -0.32
115 AT3G33064 transposable element gene -0.56 0.33 -0.33
116 AT3G02555 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits
to 130 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.34 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
117 C0150 Monogalactosyldiacylgycerol-34:3 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.6 0.33 -0.32
118 C0201 Phosphatidylglycerol-32:1 - Phosphatidylglycerol-32:1 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.6 0.31 -0.34
119 C0200 Phosphatidylglycerol-32:0 - Phosphatidylglycerol-32:0 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.6 0.34 -0.31
120 C0078 Digalactosyldiacylglycerol-34:3 - Digalactosyldiacylglycerol-34:3 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.59 0.33 -0.34
121 C0077 Digalactosyldiacylglycerol-34:2 - Digalactosyldiacylglycerol-34:2 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.56 0.31 -0.32